Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C15orf33	Gene	0	5.87	0.56	1.58	0.43	7.81	1.31	3.68
2	299338	Transcript	0	0.13	0.00	0.39	0.00	0.46	0.30	0.37
3	354658	Transcript	0	0.00	0.00	0.66	0.00	0.00	0.00	0.00
4	ER1a	ExonRegion	0	8.58	0.00	0.85	0.85	9.97	0.42	4.74
5	E1a_E2a	KnownJunction	0	3.34	0.00	0.00	0.00	0.00	0.00	4.86
6	ER2a	ExonRegion	0	16.18	0.02	2.57	1.44	17.83	1.52	13.15
7	E2a_E3a	KnownJunction	0	14.59	0.00	2.66	1.08	26.90	0.00	7.88
8	ER3a	ExonRegion	0	9.71	1.21	2.95	0.21	19.53	0.50	7.35
9	E3a_E4a	KnownJunction	0	6.23	1.34	2.08	0.00	5.16	1.42	6.91
10	ER4a	ExonRegion	0	15.43	1.80	2.72	0.82	9.37	4.12	10.28
11	E4a_E5a	KnownJunction	0	21.70	3.10	5.45	0.00	9.36	5.25	6.62
12	ER5a	ExonRegion	0	14.05	2.97	3.73	0.00	8.22	1.97	7.37
13	E5a_E6a	KnownJunction	0	4.31	2.65	2.01	0.00	3.20	1.07	3.05
14	ER6a	ExonRegion	0	5.68	1.65	0.56	0.00	4.79	1.60	3.95
15	E6a_E7a	KnownJunction	0	5.61	1.00	0.62	0.00	6.50	1.66	2.28
16	ER7a	ExonRegion	0	6.75	1.68	2.04	0.00	10.48	3.02	5.80
17	E7_Da	NovelBoundary	0	6.84	0.00	6.04	1.03	16.51	2.65	9.59
18	E7a_E8a	KnownJunction	0	0.85	0.00	0.83	0.00	2.90	0.00	1.32
19	I7	Intron	0	5.63	0.63	1.82	0.24	12.17	1.67	4.91
20	I7_AR1	ActiveIntronRegion	0	9.41	1.22	2.69	0.16	18.66	2.91	7.36
21	ER8a	ExonRegion	0	1.95	0.00	1.82	0.00	0.79	0.00	1.35
22	E8a_E9a	KnownJunction	0	0.00	0.00	0.86	0.00	0.00	0.00	0.89
23	E8a_E10a	KnownJunction	0	0.00	0.00	0.66	0.00	0.00	0.00	0.00
24	ER9a	ExonRegion	0	0.38	0.00	0.31	0.00	0.27	0.91	0.22
25	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	1.11	0.00	0.00
26	ER10a	ExonRegion	0	1.15	0.00	0.86	0.00	1.38	0.00	1.08
27	E10a_E11a	KnownJunction	0	1.67	0.00	0.53	0.00	1.94	0.00	0.80
28	ER11a	ExonRegion	0	1.45	0.00	1.00	0.00	1.74	1.31	0.72
29	E11a_E12a	KnownJunction	0	0.60	0.00	0.89	0.00	0.97	0.00	1.56
30	I11_AR2	ActiveIntronRegion	0	0.44	0.00	0.93	0.70	0.20	54.96	0.86
31	I11_SR3	SilentIntronRegion	0	2.16	0.00	2.79	3.14	0.81	75.33	1.89
32	I11_AR3	ActiveIntronRegion	0	1.98	0.45	4.38	9.67	2.36	175.68	3.26
33	I11_SR4	SilentIntronRegion	0	1.56	0.21	3.19	5.85	1.70	151.10	2.06
34	I11_AR4	ActiveIntronRegion	0	0.20	0.00	0.18	1.25	0.14	11.83	0.00
35	ER12a	ExonRegion	0	2.42	0.00	0.98	0.00	8.92	2.33	0.72
36	E12a_E13a	KnownJunction	0	0.97	0.00	0.89	0.00	3.97	3.73	0.00
37	ER13a	ExonRegion	0	2.54	1.15	3.06	1.60	9.16	0.93	0.93
38	E13a_E14a	KnownJunction	0	0.58	0.00	0.00	1.38	19.00	0.00	0.53
39	ER14a	ExonRegion	0	4.38	0.00	1.93	0.32	8.20	0.00	0.05
40	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	3.41	0.00	0.00
41	E15_Aa	NovelBoundary	0	6.43	0.00	8.81	1.63	8.53	5.52	4.99
42	ER15a	ExonRegion	0	1.82	0.00	0.75	0.00	12.22	0.11	0.00
43	E15_Da	NovelBoundary	0	7.49	0.00	11.24	2.90	9.57	2.65	6.03
44	E15a_E16a	KnownJunction	0	0.72	0.00	0.82	0.00	9.08	0.00	0.00
45	I15_AR1	ActiveIntronRegion	0	7.55	1.37	9.43	2.06	8.50	2.03	3.71
46	E16_Aa	NovelBoundary	0	5.74	2.23	6.38	3.98	7.52	6.78	2.28
47	ER16a	ExonRegion	0	0.45	0.00	0.43	0.00	6.20	0.64	0.00