Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CCNB2	Gene	0	33.99	26.29	11.88	13.56	782.95	13.22	36.87
2	288207	Transcript	0	24.22	14.54	8.03	7.66	921.19	9.00	35.93
3	IG44_AR1	ActiveIntergenicRegion	0	13.79	4.42	3.00	3.26	1.69	8.62	1.75
4	ER1a	ExonRegion	0	6.13	7.28	1.66	1.20	287.86	4.33	10.45
5	E1_Da	NovelBoundary	0	2.44	7.88	1.81	1.68	0.00	4.21	1.69
6	E1a_E2a	KnownJunction	1	0.60	2.71	1.52	2.25	126.98	1.37	14.10
7	I1	Intron	1	17.21	11.39	4.12	4.80	0.33	5.89	1.46
8	I1_AR1	ActiveIntronRegion	1	18.88	12.78	4.15	4.63	0.20	7.03	1.39
9	I1_SR1	SilentIntronRegion	0	15.35	9.83	4.09	5.00	0.49	4.61	1.55
10	E2_Aa	NovelBoundary	1	15.17	4.89	4.14	1.52	1.18	0.00	0.83
11	ER2a	ExonRegion	0	14.25	6.49	5.95	6.20	372.19	7.10	24.72
12	E2_Da	NovelBoundary	0	8.96	10.53	5.43	1.30	1.18	4.88	1.63
13	E2a_E3a	KnownJunction	1	10.95	6.91	4.54	2.71	1323.05	4.05	34.87
14	I2	Intron	0	7.26	5.15	4.03	3.56	0.39	7.86	0.48
15	I2_SR1	SilentIntronRegion	0	7.44	5.23	4.14	3.70	0.40	8.05	0.50
16	E3_Aa	NovelBoundary	1	28.14	14.69	6.06	6.04	1.18	2.52	1.25
17	ER3a	ExonRegion	0	19.91	12.03	6.75	4.17	866.56	9.84	29.42
18	E3_Da	NovelBoundary	1	28.66	8.14	8.13	11.97	0.00	8.98	1.76
19	E3a_E4a	KnownJunction	0	13.92	2.39	6.25	1.63	669.87	4.96	31.57
20	I3	Intron	0	16.57	13.77	5.62	7.66	0.81	7.97	2.45
21	I3_SR1	SilentIntronRegion	0	16.58	13.78	5.63	7.67	0.81	7.97	2.45
22	E4_Aa	NovelBoundary	1	45.08	33.21	14.07	22.03	2.05	20.34	10.28
23	ER4a	ExonRegion	0	40.45	23.90	11.25	16.70	1006.69	12.85	35.71
24	E4_Da	NovelBoundary	1	42.74	24.04	7.89	10.29	1.04	15.68	6.11
25	E4a_E5a	KnownJunction	0	23.18	2.31	7.69	6.69	1658.74	4.45	36.36
26	I4	Intron	1	37.59	18.69	5.81	6.44	1.60	17.93	4.41
27	I4_SR1	SilentIntronRegion	1	45.65	22.59	7.28	8.59	2.69	21.57	4.94
28	I4_AR1	ActiveIntronRegion	1	52.03	25.51	8.13	8.73	2.43	24.52	6.07
29	I4_SR2	SilentIntronRegion	1	33.13	16.49	4.68	4.84	0.58	15.85	4.14
30	E5_Aa	NovelBoundary	1	56.60	34.78	11.53	8.61	1.11	17.69	7.45
31	ER5a	ExonRegion	0	54.72	25.27	13.34	15.99	1097.09	14.26	39.95
32	E5_Da	NovelBoundary	1	36.77	36.15	5.81	8.89	4.98	7.61	4.87
33	E5a_E6a	KnownJunction	1	12.83	5.65	1.98	1.27	1060.52	7.26	26.63
34	I5	Intron	0	27.72	24.65	9.91	10.25	2.19	12.67	5.50
35	I5_SR1	SilentIntronRegion	0	35.27	29.93	12.81	11.62	1.79	14.37	5.40
36	I5_SR2	SilentIntronRegion	0	14.34	15.33	4.76	7.84	2.92	9.73	5.72
37	E6_Aa	NovelBoundary	1	27.25	41.51	8.58	16.63	2.07	10.99	8.56
38	ER6a	ExonRegion	0	22.08	19.08	9.99	10.15	812.48	13.86	40.49
39	E6_Da	NovelBoundary	1	37.70	36.10	6.84	7.12	2.14	15.62	8.08
40	E6a_E7a	KnownJunction	0	15.20	1.29	5.69	3.87	822.76	5.55	34.83
41	I6	Intron	0	27.28	33.68	9.11	12.90	5.05	9.60	7.15
42	I6_SR1	SilentIntronRegion	0	27.71	34.21	9.24	13.10	5.13	9.76	7.27
43	E7_Aa	NovelBoundary	1	32.93	46.76	8.65	20.59	1.98	10.83	10.72
44	ER7a	ExonRegion	0	38.71	31.78	13.88	10.32	1222.78	10.85	50.49
45	E7_Da	NovelBoundary	1	26.67	45.37	5.81	24.87	7.81	14.63	7.72
46	E7a_E8a	KnownJunction	1	20.78	4.02	6.87	2.65	1600.60	4.93	52.97
47	I7	Intron	0	43.66	38.47	13.50	18.24	7.48	13.02	20.04
48	I7_SR2	SilentIntronRegion	0	52.89	32.04	16.52	15.58	8.84	12.46	17.97
49	I7_AR1	ActiveIntronRegion	0	48.34	58.23	14.65	27.84	7.98	17.91	28.80
50	E8_Aa	NovelBoundary	0	38.35	73.03	19.21	42.78	5.07	22.97	32.05
51	ER8a	ExonRegion	0	55.08	32.70	17.65	15.53	1282.21	20.28	59.58
52	E8_Da	NovelBoundary	1	91.28	90.82	28.08	24.08	17.36	30.50	25.95
53	E8a_E9a	KnownJunction	1	13.27	7.49	0.63	0.00	969.19	6.62	46.81
54	I8	Intron	0	50.40	73.47	21.55	29.29	15.01	31.86	34.89
55	I8_AR2	ActiveIntronRegion	0	64.09	83.89	26.77	33.91	17.56	39.94	42.94
56	I8_SR1	SilentIntronRegion	1	6.30	16.28	2.57	5.99	0.16	2.70	2.56
57	I8_AR3	ActiveIntronRegion	0	26.51	66.00	17.12	37.55	12.20	22.33	24.53
58	I8_AR4	ActiveIntronRegion	0	38.20	77.70	17.38	26.30	13.46	28.03	31.03
59	E9_Aa	NovelBoundary	0	54.59	86.75	22.63	39.15	13.51	34.44	48.08
60	ER9a	ExonRegion	0	49.65	55.96	20.91	28.94	480.67	20.41	41.82
61	IG45	Intergenic	0	40.82	46.47	19.72	18.27	13.48	15.58	25.82
62	IG45_AR1	ActiveIntergenicRegion	0	45.71	34.15	16.79	16.82	8.88	15.47	22.49
63	IG45_SR1	SilentIntergenicRegion	0	33.91	43.59	18.59	16.83	10.83	9.22	28.41
64	IG45_AR2	ActiveIntergenicRegion	0	41.48	47.95	17.03	17.67	10.98	14.10	24.02
65	IG45_SR2	SilentIntergenicRegion	0	38.55	31.74	17.86	13.97	11.56	13.19	23.73
66	IG45_AR3	ActiveIntergenicRegion	0	67.84	39.23	23.19	10.70	15.77	14.87	40.62
67	IG45_AR4	ActiveIntergenicRegion	0	73.31	43.49	31.77	18.70	19.36	21.70	41.22
68	IG45_SR3	SilentIntergenicRegion	0	73.77	45.30	32.61	21.91	20.25	23.29	39.22
69	IG45_AR5	ActiveIntergenicRegion	0	56.72	51.02	28.89	20.80	16.80	19.62	39.30
70	IG45_AR6	ActiveIntergenicRegion	0	39.70	46.64	21.68	19.81	12.10	10.42	38.64
71	IG45_AR7	ActiveIntergenicRegion	0	35.04	47.74	14.23	14.59	12.88	6.13	36.77
72	IG45_AR8	ActiveIntergenicRegion	0	26.21	40.29	14.15	14.54	12.42	14.29	26.03
73	IG45_SR4	SilentIntergenicRegion	0	24.44	56.12	12.20	17.66	15.31	12.19	25.79
74	IG45_AR9	ActiveIntergenicRegion	0	49.07	59.01	26.23	22.62	17.31	20.24	27.42
75	IG45_SR5	SilentIntergenicRegion	0	38.32	41.52	23.12	21.73	16.98	14.02	22.02