Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TCF12	Gene	0	267.33	114.34	380.87	222.11	311.33	218.17	155.20
2	267811	Transcript	0	0	0	0	0	0	0	0
3	333725	Transcript	1	29.93	35.14	26.15	31.94	259.35	10.37	36.99
4	343827	Transcript	0	0.38	0.68	1.47	0.35	48.88	0.87	0.00
5	IG33_AR14	ActiveIntergenicRegion	0	3.58	2.57	2.60	3.79	12.23	7.04	1.19
6	IG33_AR15	ActiveIntergenicRegion	0	5.61	3.01	7.65	3.85	21.99	3.88	6.73
7	IG33_AR16	ActiveIntergenicRegion	0	4.92	5.53	8.50	7.06	14.76	11.81	10.12
8	ER1a	ExonRegion	0	72.52	45.82	58.24	66.47	38.04	66.85	29.55
9	E1a_E2a	KnownJunction	0	224.11	96.97	226.94	163.47	136.93	133.11	99.69
10	E2_Aa	NovelBoundary	0	16.17	22.65	49.18	77.07	12.17	59.44	4.26
11	ER2a	ExonRegion	0	180.63	144.71	278.94	261.82	174.65	207.64	133.32
12	E2a_E3a	KnownJunction	0	207.87	167.64	358.27	288.68	125.68	306.24	142.34
13	ER3a	ExonRegion	0	233.83	183.21	411.87	329.49	135.43	285.12	139.77
14	E3a_E4a	KnownJunction	0	268.27	173.52	418.90	330.16	152.93	213.89	149.05
15	E3a_E5a	NovelJunction	0	9.10	7.09	5.98	16.77	4.10	19.30	0.89
16	ER4a	ExonRegion	0	262.95	168.88	442.81	346.55	222.98	231.88	181.88
17	E4a_E5a	KnownJunction	0	239.62	179.83	464.38	324.39	255.26	269.98	191.12
18	ER5a	ExonRegion	0	361.69	212.07	586.21	350.63	262.42	327.29	182.40
19	E5a_E6a	KnownJunction	0	477.28	220.76	665.19	384.34	265.71	367.21	182.31
20	E5a_E7a	NovelJunction	1	0.00	0.00	4.24	6.20	0.00	9.62	0.00
21	ER6a	ExonRegion	0	457.42	224.54	714.16	371.90	305.71	371.80	190.06
22	E6a_E7a	KnownJunction	0	438.80	211.75	715.23	340.05	308.45	381.20	183.18
23	ER7a	ExonRegion	0	487.63	161.04	672.66	290.18	299.12	335.21	163.77
24	E7a_E8a	KnownJunction	0	366.94	155.34	561.39	272.64	233.36	364.45	161.09
25	ER8a	ExonRegion	0	488.52	188.65	730.36	349.06	388.99	419.55	209.98
26	E8a_E10a	KnownJunction	0	623.12	201.00	771.33	398.13	495.50	388.27	205.64
27	ER9a	ExonRegion	0	0.76	1.37	2.94	0.71	67.09	0.66	0.00
28	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	30.66	1.07	0.00
29	ER10a	ExonRegion	0	610.31	223.64	759.55	423.51	546.39	433.78	242.90
30	E10a_E11a	KnownJunction	0	352.26	188.87	527.10	352.46	642.67	343.92	243.48
31	E10a_E12a	NovelJunction	1	45.15	16.39	55.56	60.36	5.49	51.64	6.98
32	ER11a	ExonRegion	0	473.92	198.42	571.88	332.61	446.70	305.84	261.56
33	E11a_E12a	KnownJunction	0	268.77	186.19	407.74	324.01	400.22	279.52	243.63
34	ER12a	ExonRegion	0	318.80	188.39	445.87	323.17	381.66	284.00	257.47
35	E12a_E13a	KnownJunction	0	190.60	162.83	304.58	309.49	267.69	232.70	207.58
36	ER13a	ExonRegion	0	203.02	167.37	342.07	307.35	360.32	245.22	240.25
37	E13a_E14a	KnownJunction	0	215.73	137.95	324.57	282.78	426.13	242.89	223.63
38	ER14a	ExonRegion	0	241.35	149.89	380.85	285.32	481.24	262.92	253.50
39	E14a_E15a	KnownJunction	0	251.17	169.35	389.44	269.12	473.92	281.10	270.85
40	E14a_E17a	NovelJunction	1	2.30	0.00	5.73	14.30	0.00	9.81	0.00
41	E15_Aa	NovelBoundary	1	94.55	5.52	141.10	3.31	3.16	2.92	0.89
42	ER15a	ExonRegion	0	217.72	169.87	351.51	296.24	526.14	271.34	260.05
43	E15a_E16a	KnownJunction	1	31.46	39.80	38.18	34.27	264.46	11.44	41.75
44	E15a_E17a	KnownJunction	0	195.89	125.63	283.28	265.22	150.65	223.13	158.05
45	ER16a	ExonRegion	1	32.82	36.04	27.64	31.52	258.33	8.91	36.78
46	E16a_E17a	KnownJunction	1	25.52	29.58	12.62	30.02	255.26	10.75	32.43
47	ER17a	ExonRegion	0	256.59	148.46	395.88	316.40	443.57	246.27	233.16
48	E17a_E18a	KnownJunction	0	370.97	109.76	420.33	272.40	491.05	229.54	166.49
49	ER18a	ExonRegion	0	529.87	143.72	642.32	342.85	498.95	277.33	231.09
50	E18a_E19a	KnownJunction	0	542.26	173.05	664.87	415.50	373.85	371.28	200.01
51	ER19a	ExonRegion	0	589.79	185.05	723.68	383.67	446.01	360.13	227.70
52	E19a_E20a	KnownJunction	0	325.27	115.10	450.11	244.80	356.72	228.82	161.03
53	ER20a	ExonRegion	0	281.57	132.02	462.46	255.17	318.57	256.21	187.20
54	E20a_E21a	KnownJunction	0	207.79	105.22	313.14	236.80	357.94	206.81	179.06
55	ER21a	ExonRegion	0	155.53	102.57	252.38	219.00	255.93	217.36	138.80
56	E21a_E22a	KnownJunction	0	162.11	91.19	231.68	163.66	210.91	111.35	141.25
57	ER22a	ExonRegion	0	234.92	85.14	340.99	176.06	309.56	190.30	135.68
58	IG34_AR1	ActiveIntergenicRegion	0	55.97	9.29	55.39	14.09	21.22	22.48	20.10
59	IG34_AR3	ActiveIntergenicRegion	0	15.04	5.11	29.72	10.12	10.00	13.30	4.67
60	IG34_AR5	ActiveIntergenicRegion	0	8.88	2.99	16.84	7.12	4.30	7.03	2.19
61	IG34_SR3	SilentIntergenicRegion	0	6.18	1.66	12.47	5.29	0.85	3.66	1.18
62	IG34_AR6	ActiveIntergenicRegion	0	7.36	4.86	14.96	5.55	1.46	1.06	1.51
63	IG34_AR7	ActiveIntergenicRegion	0	9.22	1.64	18.95	4.84	0.87	4.46	0.62
64	IG34_SR6	SilentIntergenicRegion	0	6.82	2.95	11.29	3.93	0.89	3.30	1.18
65	IG34_AR9	ActiveIntergenicRegion	0	8.95	3.49	19.87	6.56	1.77	5.00	1.08
66	IG34_AR10	ActiveIntergenicRegion	0	11.40	5.47	18.06	6.34	2.83	6.54	1.29
67	IG34_SR7	SilentIntergenicRegion	0	17.25	3.13	28.32	7.58	2.13	7.17	0.93
68	IG34_AR11	ActiveIntergenicRegion	0	9.21	4.52	19.24	5.33	1.92	4.50	1.09
69	IG34_SR8	SilentIntergenicRegion	0	5.84	1.92	19.79	6.05	1.39	5.09	1.23
70	IG34_AR12	ActiveIntergenicRegion	0	4.38	2.88	9.51	4.78	1.63	4.56	1.54