Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AC012100.1	Gene	0	301.31	339.36	316.04	153.62	153.28	249.08	233.52
2	261854	Transcript	0	335.04	371.36	345.37	169.41	176.33	266.07	264.68
3	ER1a	ExonRegion	0	8.47	58.31	6.96	24.25	4.60	37.79	14.71
4	E1a_E2a	KnownJunction	0	61.27	194.33	70.67	86.01	13.67	137.99	86.78
5	ER2a	ExonRegion	0	147.08	335.05	158.14	141.58	87.16	208.01	143.93
6	E2a_E3a	KnownJunction	0	259.31	437.10	254.54	167.75	125.64	317.66	188.90
7	ER3a	ExonRegion	0	355.63	515.42	357.09	227.15	139.60	373.35	251.00
8	E3a_E4a	KnownJunction	0	380.66	486.28	387.44	225.83	160.59	384.09	275.69
9	ER4a	ExonRegion	0	342.77	387.89	371.04	185.28	155.91	288.48	264.19
10	E4a_E5a	KnownJunction	0	462.41	318.46	398.06	153.88	172.37	226.38	236.30
11	ER5a	ExonRegion	0	405.66	329.94	415.74	162.04	201.01	227.68	228.98
12	E5a_E6a	KnownJunction	0	410.21	375.92	469.91	190.78	209.64	230.05	252.92
13	ER6a	ExonRegion	0	571.33	447.15	569.75	240.03	231.87	293.85	327.18
14	E6a_E7a	KnownJunction	0	482.34	356.90	420.42	198.20	232.26	278.72	325.07
15	ER7a	ExonRegion	0	465.13	430.22	416.84	196.34	227.26	296.43	335.61
16	E7a_E8a	KnownJunction	0	438.75	433.37	435.51	207.60	244.64	327.12	320.41
17	ER8a	ExonRegion	0	429.06	421.90	422.31	181.95	202.01	300.95	360.91
18	E8a_E9a	KnownJunction	0	330.51	359.52	343.06	177.74	175.78	239.91	319.29
19	E8a_E10a	NovelJunction	1	17.34	49.15	11.80	7.48	0.00	42.10	0.89
20	E8a_E11a	NovelJunction	0	3.89	12.45	3.77	8.53	0.00	6.11	0.00
21	ER9a	ExonRegion	0	354.54	353.06	375.87	147.73	188.52	241.76	310.20
22	E9a_E10a	KnownJunction	0	450.18	378.68	459.36	153.61	272.18	251.33	313.41
23	ER10a	ExonRegion	0	389.83	351.86	391.09	148.21	213.21	245.26	291.41
24	E10a_E11a	KnownJunction	0	315.34	376.76	326.82	165.12	201.37	234.15	280.29
25	ER11a	ExonRegion	0	248.20	331.70	304.28	154.01	179.26	205.90	259.75
26	E11a_E12a	KnownJunction	0	182.19	270.44	237.01	139.44	146.36	196.28	199.34
27	E11a_E13a	NovelJunction	0	2.79	9.43	9.37	7.40	0.95	14.15	0.57
28	I11_AR1	ActiveIntronRegion	1	67.64	28.65	29.46	5.32	8.21	11.54	5.81
29	ER12a	ExonRegion	0	296.39	383.88	345.20	159.08	202.77	276.05	317.13
30	E12a_E13a	KnownJunction	0	290.79	406.21	359.63	159.19	218.56	256.34	329.87
31	ER13a	ExonRegion	0	336.60	440.63	354.20	200.31	215.12	304.47	348.95
32	E13a_E14a	KnownJunction	0	347.37	428.38	338.75	220.20	176.91	340.81	313.89
33	E13a_E15a	NovelJunction	0	9.75	20.75	13.09	8.13	5.19	20.31	4.84
34	ER14a	ExonRegion	0	377.51	475.13	382.44	187.90	192.61	360.44	323.27
35	E14a_E15a	KnownJunction	0	365.88	450.50	379.09	197.14	196.92	401.11	290.71
36	ER15a	ExonRegion	0	210.79	234.35	264.36	114.45	125.66	233.69	165.60
37	IG44_SR7	SilentIntergenicRegion	0	9.31	12.28	11.32	4.88	18.74	2.84	1.07
38	IG44_AR10	ActiveIntergenicRegion	0	121.45	73.01	108.47	52.11	74.74	92.59	41.74
39	IG44_AR9	ActiveIntergenicRegion	0	74.16	61.01	88.88	41.80	49.69	118.07	60.04
40	IG44_AR8	ActiveIntergenicRegion	0	94.85	58.69	113.42	31.44	61.37	66.51	58.50
41	IG44_SR6	SilentIntergenicRegion	0	4.23	6.68	4.74	4.36	8.91	9.19	3.37
42	IG44_AR6	ActiveIntergenicRegion	0	94.91	66.19	157.91	38.17	49.89	82.74	62.55
43	IG44_AR4	ActiveIntergenicRegion	0	93.56	63.75	160.58	52.15	48.64	113.84	70.63
44	IG44_SR3	SilentIntergenicRegion	0	30.09	15.15	34.71	8.44	14.52	20.28	10.10
45	IG44_AR2	ActiveIntergenicRegion	0	84.21	51.29	117.61	52.05	48.74	140.75	48.83