Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TUBGCP4	Gene	0	49.35	44.60	107.39	94.49	95.92	57.29	58.93
2	260383	Transcript	0	44.77	32.46	99.33	75.16	85.25	45.51	48.76
3	399460	Transcript	1	10.68	17.80	31.85	42.37	21.45	9.26	16.36
4	IG34	Intergenic	0	6.88	10.88	7.79	10.83	13.36	9.27	11.38
5	IG34_AR1	ActiveIntergenicRegion	0	9.04	12.61	9.92	15.33	19.67	9.39	15.75
6	IG34_SR1	SilentIntergenicRegion	0	2.54	21.87	6.37	11.22	10.04	18.88	9.78
7	IG34_AR2	ActiveIntergenicRegion	0	5.90	10.80	6.96	7.93	9.01	10.69	8.77
8	ER1a	ExonRegion	0	9.36	16.41	25.33	40.64	16.96	17.31	18.18
9	E1a_E2a	KnownJunction	0	13.82	37.31	49.00	70.60	49.13	36.85	34.44
10	E2_Aa	NovelBoundary	1	5.02	11.98	25.75	31.91	14.73	11.20	18.19
11	ER2a	ExonRegion	0	22.45	44.56	62.53	89.84	45.52	35.51	47.15
12	E2a_E3a	KnownJunction	0	22.30	45.32	69.19	92.03	35.50	32.03	53.03
13	ER3a	ExonRegion	0	28.25	41.19	84.44	97.56	49.94	38.22	53.55
14	E3a_E4a	KnownJunction	0	27.72	41.59	92.44	105.57	60.54	47.06	48.10
15	ER4a	ExonRegion	0	29.03	38.90	114.10	107.65	65.52	39.71	55.67
16	E4a_E5a	KnownJunction	1	24.85	28.37	105.55	94.41	54.29	26.85	49.16
17	ER5a	ExonRegion	1	31.22	30.54	111.02	90.98	55.03	25.64	58.30
18	E5a_E6a	KnownJunction	0	30.14	27.40	95.56	74.47	59.06	27.76	47.87
19	ER6a	ExonRegion	0	28.62	29.28	90.09	76.55	58.25	31.75	45.16
20	E6a_E7a	KnownJunction	1	20.70	29.35	91.98	66.48	54.17	26.93	37.65
21	ER7a	ExonRegion	0	32.92	45.26	101.97	87.28	66.55	28.33	54.97
22	E7a_E8a	KnownJunction	0	59.32	58.82	153.56	99.64	99.77	30.79	63.79
23	ER8a	ExonRegion	1	60.86	63.06	152.48	115.19	96.80	27.67	81.00
24	E8a_E9a	KnownJunction	1	70.78	52.83	162.69	105.95	145.83	24.68	82.25
25	ER9a	ExonRegion	0	45.74	37.16	122.00	106.67	111.65	33.22	79.81
26	E9a_E10a	KnownJunction	0	42.53	31.58	106.97	82.41	91.04	27.84	75.51
27	ER10a	ExonRegion	0	44.21	36.73	127.64	96.24	92.02	39.35	81.33
28	E10a_E11a	KnownJunction	0	37.94	34.31	121.24	99.86	93.64	46.95	72.50
29	ER11a	ExonRegion	0	53.29	52.38	157.75	164.90	150.98	53.81	102.53
30	E11a_E12a	KnownJunction	0	55.59	47.84	150.79	121.83	154.48	49.90	79.28
31	ER12a	ExonRegion	0	45.15	46.21	120.32	111.93	108.27	35.24	73.77
32	E12a_E13a	KnownJunction	1	13.97	27.27	42.38	57.89	24.25	11.23	16.19
33	E12a_E13b	KnownJunction	1	21.45	20.36	67.22	61.31	61.39	15.81	49.76
34	ER13a	ExonRegion	1	18.06	26.12	53.17	69.21	40.09	16.55	32.89
35	ER13b	ExonRegion	1	34.43	37.53	101.86	94.80	92.89	25.40	53.70
36	E13a_E14a	KnownJunction	1	29.07	29.35	63.83	53.04	67.96	12.41	43.61
37	ER14a	ExonRegion	0	34.92	39.83	101.63	82.18	80.36	31.20	69.51
38	E14a_E15a	KnownJunction	0	38.52	32.60	103.70	80.92	66.44	31.38	81.79
39	ER15a	ExonRegion	0	27.94	31.46	98.53	73.63	85.48	27.13	71.79
40	E15a_E16a	KnownJunction	0	34.23	31.68	67.77	73.23	59.57	26.29	51.02
41	I15	Intron	0	5.26	3.23	7.60	10.23	21.69	15.60	4.84
42	I15_AR1	ActiveIntronRegion	0	5.27	3.24	7.61	10.25	21.72	15.62	4.85
43	E16_Aa	NovelBoundary	1	26.54	48.89	32.18	141.82	178.31	269.39	39.35
44	ER16a	ExonRegion	1	42.42	48.50	87.65	120.58	132.34	127.08	70.03
45	E16_Da	NovelBoundary	1	30.18	57.11	31.82	101.56	93.41	194.16	29.52
46	E16a_E17a	KnownJunction	0	19.24	18.55	53.54	68.62	42.37	30.69	40.27
47	I16	Intron	1	28.62	34.13	27.66	66.05	77.24	140.38	26.78
48	I16_AR1	ActiveIntronRegion	1	28.71	34.24	27.75	66.26	77.46	140.79	26.87
49	E17_Aa	NovelBoundary	1	9.23	24.64	4.05	49.33	32.44	80.51	17.20
50	ER17a	ExonRegion	0	35.24	40.23	92.43	99.37	93.65	80.14	54.81
51	E17_Da	NovelBoundary	1	19.98	21.49	16.43	58.44	52.91	91.98	15.81
52	E17a_E18a	KnownJunction	1	21.05	16.76	89.74	60.63	47.24	12.68	36.79
53	I17	Intron	1	13.03	14.85	14.08	25.04	32.26	54.56	10.85
54	I17_AR1	ActiveIntronRegion	1	13.09	14.90	14.13	25.15	32.37	54.78	10.90
55	E18_Aa	NovelBoundary	1	23.83	26.01	23.65	32.75	40.53	101.25	20.79
56	ER18a	ExonRegion	0	91.83	60.26	141.03	103.55	147.11	108.05	59.75
57	E18_Da	NovelBoundary	0	206.52	181.90	168.28	207.27	157.75	182.85	93.25
58	I18	Intron	0	57.14	41.61	114.49	79.24	113.23	71.41	40.72
59	I18_AR1	ActiveIntronRegion	0	57.19	41.65	114.60	79.32	113.35	71.49	40.76
60	Ix	Intron	1	40.48	31.97	107.27	88.26	91.21	40.24	38.48
61	Ix_AR1	ActiveIntronRegion	0	40.69	32.14	107.82	88.72	91.66	40.44	38.67
62	Ix	Intron	1	30.28	24.63	109.57	45.16	48.30	25.86	26.63
63	Ix_AR1	ActiveIntronRegion	0	30.40	24.72	109.95	45.31	48.46	25.94	26.72
64	Ix	Intron	1	33.29	31.20	103.06	69.85	71.22	43.81	24.20
65	Ix_AR1	ActiveIntronRegion	0	33.41	31.30	103.43	70.09	71.48	43.96	24.28
66	ER19a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00