Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	KIF23	Gene	0	43.89	20.76	38.20	44.15	286.99	13.44	60.08
2	352331	Transcript	1	10.66	6.67	10.52	12.46	250.15	0.00	68.75
3	260363	Transcript	0	0	0	0	0	0	0	0
4	395392	Transcript	0	0.41	0.23	0.05	0.34	4.27	0.09	0.62
5	IG38	Intergenic	0	8.26	3.32	9.07	5.12	1.09	1.01	3.43
6	IG38_SR1	SilentIntergenicRegion	0	8.40	2.20	8.99	3.98	1.07	0.83	2.96
7	IG38_AR1	ActiveIntergenicRegion	0	6.65	16.52	10.15	18.48	1.34	3.06	8.91
8	ER1a	ExonRegion	1	9.41	13.34	5.36	17.91	44.26	1.21	18.80
9	E1_Da	NovelBoundary	1	3.99	4.99	1.75	13.63	0.00	0.00	9.33
10	E1a_E3a	KnownJunction	0	13.12	10.40	8.82	14.95	38.38	6.19	21.30
11	I1_AR1	ActiveIntronRegion	0	3.61	5.30	1.97	8.85	0.19	1.22	3.65
12	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER3a	ExonRegion	0	24.77	14.39	16.88	20.11	64.21	8.42	28.33
14	E3a_E4a	KnownJunction	0	27.87	17.50	23.28	33.65	61.62	8.90	31.29
15	ER4a	ExonRegion	0	38.72	22.97	30.22	33.84	169.74	12.59	42.48
16	E4a_E5a	KnownJunction	0	67.81	31.24	42.87	38.23	270.92	18.95	48.50
17	ER5a	ExonRegion	0	65.60	37.21	48.13	45.77	317.91	15.11	62.43
18	E5a_E6a	KnownJunction	0	69.86	31.00	41.52	58.27	289.38	25.41	64.81
19	E5a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	14.11	0.00	8.38
20	ER6a	ExonRegion	0	82.73	29.10	50.44	64.05	370.66	30.54	73.23
21	E6_Da	NovelBoundary	1	22.58	0.97	11.55	1.44	10.81	0.00	0.00
22	E6a_E7a	KnownJunction	0	59.70	25.14	38.61	51.80	309.18	23.69	65.29
23	ER7a	ExonRegion	0	51.16	25.20	47.75	48.36	279.91	18.11	64.80
24	E7a_E8a	KnownJunction	0	35.47	17.58	30.29	34.60	242.56	7.21	65.42
25	ER8a	ExonRegion	0	34.99	11.96	41.14	31.42	202.71	6.25	47.39
26	E8a_E9a	KnownJunction	1	20.90	9.90	25.77	27.06	138.22	10.24	8.48
27	ER9a	ExonRegion	0	27.87	17.48	35.15	35.46	149.26	9.33	44.18
28	E9a_E10a	KnownJunction	0	22.88	15.47	39.03	34.70	139.75	10.85	62.11
29	ER10a	ExonRegion	0	29.09	21.85	32.90	38.45	242.05	12.06	59.61
30	E10a_E11a	KnownJunction	0	28.76	29.69	24.82	44.00	256.23	14.23	66.37
31	ER11a	ExonRegion	0	33.78	27.84	42.11	43.53	289.31	15.82	76.81
32	E11a_E12a	KnownJunction	0	38.19	24.91	39.12	40.47	311.63	17.39	70.24
33	ER12a	ExonRegion	0	37.72	32.98	32.70	48.74	329.09	20.08	72.11
34	E12a_E13a	KnownJunction	0	31.26	32.29	33.97	52.91	343.14	21.12	75.14
35	ER13a	ExonRegion	0	42.42	33.55	48.24	57.09	399.13	17.77	80.89
36	E13a_E14a	KnownJunction	0	51.79	25.46	36.80	62.20	437.38	13.45	71.00
37	ER14a	ExonRegion	0	66.90	23.86	46.77	59.85	491.00	12.50	91.33
38	E14a_E15a	KnownJunction	0	63.86	22.96	47.95	47.57	453.82	6.65	92.82
39	E15_Aa	NovelBoundary	1	18.43	1.08	2.33	3.90	0.90	0.00	0.66
40	ER15a	ExonRegion	0	75.16	22.13	57.49	65.17	436.87	18.33	97.07
41	E15a_E16a	KnownJunction	0	68.31	18.15	55.77	60.20	454.46	18.68	77.28
42	ER16a	ExonRegion	0	54.83	19.21	57.04	46.06	323.36	19.11	84.59
43	E16a_E17a	KnownJunction	0	51.96	20.81	56.16	40.47	315.52	14.77	73.26
44	ER17a	ExonRegion	0	57.43	18.80	54.42	41.52	319.51	8.17	67.87
45	E17a_E18a	KnownJunction	1	56.65	21.57	50.20	39.44	353.61	4.48	63.13
46	E17a_E20a	NovelJunction	0	1.44	0.00	0.00	0.00	11.87	0.00	6.76
47	ER18a	ExonRegion	0	59.07	20.71	44.62	52.59	368.75	8.78	71.30
48	E18a_E19a	KnownJunction	1	46.30	19.18	37.05	36.19	209.53	12.22	16.68
49	E18a_E20a	KnownJunction	1	10.66	6.67	10.52	12.46	250.15	0.00	68.75
50	ER19a	ExonRegion	0	25.30	17.43	20.31	48.05	202.44	13.21	21.31
51	E19a_E20a	KnownJunction	0	19.29	12.43	16.53	44.78	224.67	7.13	27.16
52	ER20a	ExonRegion	0	33.39	30.91	30.66	49.69	364.21	14.56	75.47
53	E20a_E21a	KnownJunction	0	39.87	32.31	36.90	48.71	481.16	11.04	56.95
54	ER21a	ExonRegion	0	42.33	24.93	36.01	59.33	447.37	12.50	83.13
55	E21a_E22a	KnownJunction	0	41.39	23.72	32.46	48.63	397.41	11.50	90.14
56	E21a_E23a	NovelJunction	0	3.37	7.20	2.96	10.19	13.88	2.97	4.20
57	ER22a	ExonRegion	0	35.54	20.09	25.25	49.47	403.02	13.31	71.92
58	E22a_E23a	KnownJunction	1	33.46	22.57	19.37	62.44	352.36	12.78	70.17
59	ER23a	ExonRegion	0	38.50	27.91	30.93	66.77	394.98	11.74	89.15
60	E23a_E24a	KnownJunction	0	38.45	29.03	37.38	59.36	344.80	11.95	75.02
61	ER24a	ExonRegion	0	45.28	11.82	40.32	33.74	245.74	13.58	50.10
62	I24_SR6	SilentIntronRegion	0	3.07	5.32	1.86	9.82	2.40	6.18	7.79
63	ER25a	ExonRegion	0	0.83	0.47	0.10	0.67	8.53	0.19	1.25