Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SLTM	Gene	0	345.29	163.99	378.02	243.85	438.11	223.29	162.52
2	249736	Transcript	1	10.49	2.05	16.57	18.65	4.98	12.30	2.78
3	249735	Transcript	0	14.66	34.77	14.77	17.14	48.61	18.80	3.35
4	380516	Transcript	0	360.20	167.56	371.02	215.77	416.20	212.76	150.31
5	ER1a	ExonRegion	0	50.44	67.53	53.12	77.62	55.56	73.25	27.09
6	E1a_E2a	KnownJunction	0	126.36	145.83	172.16	222.42	144.73	178.92	94.87
7	E1a_E3a	NovelJunction	1	4.44	2.63	5.29	18.88	3.30	8.09	1.71
8	ER2a	ExonRegion	0	229.04	184.09	286.44	254.82	239.17	216.96	104.72
9	E2a_E3a	KnownJunction	0	275.40	174.13	343.08	231.39	279.72	192.96	114.42
10	ER3a	ExonRegion	0	272.97	211.10	377.01	277.88	320.73	269.98	157.50
11	E3a_E4a	KnownJunction	0	199.24	200.98	323.71	245.31	302.52	291.77	158.84
12	E3a_E5a	KnownJunction	0	10.88	19.47	10.04	17.34	0.00	23.91	2.12
13	E3a_E6a	KnownJunction	1	19.44	2.55	28.11	39.15	7.63	33.12	2.74
14	ER4a	ExonRegion	0	434.65	226.94	504.43	263.27	484.22	263.66	192.26
15	E4a_E5a	KnownJunction	0	588.54	242.75	552.17	282.72	726.26	264.11	205.11
16	ER5a	ExonRegion	0	560.33	255.52	517.28	274.62	694.89	247.37	192.10
17	E6a_E7a	KnownJunction	0	345.95	111.29	258.34	177.66	305.31	172.19	98.39
18	E6a_E8a	KnownJunction	1	18.44	50.07	19.50	16.93	97.21	13.69	4.59
19	ER6a	ExonRegion	0	445.67	201.75	370.29	234.65	483.16	214.55	134.48
20	ER6b	ExonRegion	0	5.38	2.43	5.42	1.87	4.86	1.84	2.70
21	ER7a	ExonRegion	0	389.82	101.15	277.24	171.28	377.57	152.79	111.88
22	E7_Ab	KnownBoundary	0	495.79	107.35	344.44	189.83	493.05	148.47	127.09
23	ER7b	ExonRegion	0	568.66	161.13	465.60	310.47	588.16	203.04	178.45
24	E7_Da	KnownBoundary	0	13.10	2.81	28.73	33.51	7.88	5.23	6.19
25	E7a_E8a	KnownJunction	0	203.02	122.27	310.24	154.37	301.35	132.04	135.39
26	ER7c	ExonRegion	0	6.65	1.17	16.18	14.94	2.46	1.93	2.91
27	ER8a	ExonRegion	0	225.81	186.43	390.66	238.17	393.98	189.47	170.75
28	E8a_E9a	KnownJunction	0	185.69	168.48	348.35	259.99	462.67	198.93	164.07
29	ER9a	ExonRegion	0	301.79	169.44	447.28	268.05	427.64	211.09	180.19
30	E9a_E10a	KnownJunction	0	406.32	194.54	532.97	326.50	469.82	286.62	204.55
31	E9a_E11a	NovelJunction	0	15.96	7.09	19.44	8.15	7.72	5.82	14.17
32	ER10a	ExonRegion	0	479.31	187.72	597.90	333.05	507.80	245.43	210.35
33	E10_Da	NovelBoundary	1	218.04	1.29	239.70	2.14	3.11	1.34	3.77
34	E10a_E11a	KnownJunction	0	527.49	200.00	618.05	279.50	401.83	219.87	150.91
35	ER11a	ExonRegion	0	522.77	170.83	641.07	272.01	401.59	209.27	194.10
36	E11a_E12a	KnownJunction	0	512.58	149.90	552.09	185.22	334.91	191.99	174.97
37	ER12a	ExonRegion	0	541.13	192.05	646.07	280.59	465.20	286.97	199.95
38	E12a_E13a	KnownJunction	0	588.04	223.36	761.31	346.98	596.03	338.51	224.30
39	ER13a	ExonRegion	0	635.74	241.08	768.44	362.20	658.04	352.63	256.90
40	E13a_E14a	KnownJunction	0	607.81	216.95	643.36	332.92	655.42	322.62	236.25
41	ER14a	ExonRegion	0	440.25	207.44	554.39	334.13	576.83	271.45	229.05
42	E14a_E15a	KnownJunction	0	232.66	126.55	303.01	170.48	564.91	161.68	155.74
43	E14a_E16a	NovelJunction	0	72.35	92.87	82.63	131.66	32.67	110.71	23.06
44	ER15a	ExonRegion	0	220.40	114.53	310.82	184.85	531.67	133.40	176.56
45	E15a_E16a	KnownJunction	0	182.37	137.93	253.95	195.19	499.79	114.46	176.63
46	ER16a	ExonRegion	0	288.93	191.20	383.70	295.05	596.89	255.26	233.75
47	E16a_E17a	KnownJunction	0	366.94	219.94	437.48	339.94	603.32	339.42	234.33
48	ER17a	ExonRegion	0	515.01	212.02	503.40	359.02	729.96	317.89	246.10
49	E17a_E18a	KnownJunction	0	708.30	206.94	615.84	411.97	718.30	344.30	249.95
50	ER18a	ExonRegion	0	497.78	248.20	500.11	376.14	684.02	368.95	230.27
51	E18a_E19a	KnownJunction	0	243.12	224.91	237.20	384.99	565.67	337.41	193.72
52	ER19a	ExonRegion	0	197.12	207.27	220.94	314.97	469.54	304.64	179.48
53	E19a_E20a	KnownJunction	0	175.86	227.80	201.23	286.41	531.16	317.39	162.52
54	ER20a	ExonRegion	0	203.76	205.06	216.35	275.43	447.99	254.02	156.54
55	E20a_E21a	KnownJunction	0	242.10	141.73	255.61	214.72	507.23	232.22	152.30
56	ER21a	ExonRegion	0	231.66	115.95	258.09	150.70	292.58	182.07	116.87
57	IG42	Intergenic	0	24.71	4.64	17.44	7.76	41.93	4.24	30.59
58	IG42_AR5	ActiveIntergenicRegion	0	49.25	11.51	36.65	20.28	100.34	12.14	64.08
59	IG42_SR2	SilentIntergenicRegion	0	14.35	3.96	9.98	4.12	40.02	1.81	21.29
60	IG42_AR4	ActiveIntergenicRegion	0	34.07	10.12	23.12	11.17	96.81	3.58	48.09
61	IG42_SR1	SilentIntergenicRegion	0	37.42	14.21	31.90	15.59	93.13	4.41	55.38
62	IG42_AR3	ActiveIntergenicRegion	0	35.02	12.84	33.58	16.03	83.53	5.95	57.73
63	IG42_AR2	ActiveIntergenicRegion	0	36.02	15.19	34.97	16.52	82.71	7.82	63.33
64	IG42_AR1	ActiveIntergenicRegion	0	68.38	11.13	46.91	16.74	105.80	8.41	83.52