Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SNURF	Gene	0	0.60	0.37	0.61	0.67	18.28	0.29	2.47
2	401453	Transcript	0	0.40	0.15	0.46	0.38	15.19	0.00	1.79
3	338327	Transcript	0	0.75	0.46	0.00	0.80	12.90	0.86	1.58
4	403911	Transcript	0	0.00	0.00	0.12	0.00	1.80	0.00	0.31
5	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.61	0.00	0.00
6	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	2.54	0.00	0.00
8	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	3.43	0.00	0.00
9	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	6.77	0.00	0.00
10	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	4.38	0.00	0.00
11	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	9.10	0.00	0.00
12	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	36.98	0.00	0.00
13	ER5a	ExonRegion	0	0.00	0.00	0.01	0.00	39.07	0.00	0.02
14	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E5a_E8a	NovelJunction	0	0.00	0.00	0.00	0.00	24.71	0.00	0.00
16	E6_Aa	NovelBoundary	0	0.00	0.00	0.72	0.00	25.45	0.00	0.00
17	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	21.72	0.00	0.66
18	E6_Ab	KnownBoundary	0	0.93	0.00	1.49	0.00	3.00	0.00	2.09
19	ER6b	ExonRegion	0	0.00	0.00	0.00	0.00	17.15	0.00	0.09
20	E6a_E7a	NovelJunction	0	2.02	0.00	3.56	0.00	9.11	0.00	6.97
21	E6a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E7_Aa	NovelBoundary	0	1.03	0.00	0.00	0.00	21.35	0.00	3.81
23	ER7a	ExonRegion	0	1.84	0.27	2.44	1.81	36.80	0.00	11.49
24	E7_Da	NovelBoundary	0	2.72	0.00	1.25	4.50	15.03	4.18	4.14
25	E7a_E8a	KnownJunction	0	2.94	1.58	3.06	2.71	42.60	0.00	9.95
26	ER8a	ExonRegion	0	2.11	1.21	3.25	0.71	41.97	1.40	9.00
27	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	Ix	Intron	0	16.18	4.15	13.43	2.70	115.01	1.13	9.16
29	Ix_AR1	ActiveIntronRegion	0	20.44	3.77	18.50	2.48	86.06	0.92	9.23
30	Ix_SR3	SilentIntronRegion	0	32.63	4.96	20.28	3.47	200.77	0.44	21.67
31	Ix_AR7	ActiveIntronRegion	0	26.03	16.53	15.22	12.59	454.10	6.63	16.88
32	ER9a	ExonRegion	0	1.65	1.76	0.65	3.79	31.89	0.87	3.80
33	E9_Da	KnownBoundary	0	87.02	25.43	98.48	34.65	4549.73	20.21	155.05
34	ER9b	ExonRegion	0	2.73	2.43	0.86	2.49	45.08	2.45	4.09
35	E9b_E10a	KnownJunction	0	1.72	0.97	0.00	1.46	11.27	1.55	3.53
36	E9b_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	E10_Aa	NovelBoundary	0	7.68	0.00	4.94	1.19	47.21	3.11	5.86
38	ER10a	ExonRegion	0	0.54	0.40	0.00	0.94	5.69	1.04	0.55
39	E10_Da	NovelBoundary	0	6.51	1.63	10.56	1.60	66.99	1.66	1.65
40	Ix_AR4	ActiveIntronRegion	0	10.74	5.14	14.80	4.35	114.55	1.22	10.83
41	ER11a	ExonRegion	0	0.00	0.00	0.24	0.00	3.59	0.00	0.63