Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 HERC2P2 Gene 0 19.54 9.54 21.73 9.03 16.75 8.81 13.14 2 382946 Transcript 0 7.85 4.88 10.34 4.31 6.65 2.98 6.42 3 ER1a ExonRegion 0 0.77 3.83 7.23 1.81 2.33 1.04 3.13 4 E1a_E2a KnownJunction 0 28.89 7.38 42.00 7.50 13.67 2.84 23.09 5 ER2a ExonRegion 0 5.55 8.93 10.31 4.29 4.65 5.16 5.59 6 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER3a ExonRegion 0 3.57 3.41 6.34 2.41 2.57 1.85 3.10 8 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER4a ExonRegion 0 6.80 1.84 10.97 4.34 12.20 1.38 3.98 10 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER5a ExonRegion 0 7.92 12.74 16.18 13.84 5.99 5.89 5.22 12 E5a_E6a KnownJunction 1 22.43 24.85 51.00 27.04 37.30 7.42 17.15 13 ER6a ExonRegion 0 11.21 11.76 21.81 14.03 10.81 8.36 6.77 14 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER7a ExonRegion 0 2.96 0.48 4.84 1.54 4.64 0.94 1.56 16 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER8a ExonRegion 0 6.87 0.95 6.38 0.55 3.86 0.37 1.88 18 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER9a ExonRegion 1 18.92 9.95 23.69 2.08 8.04 2.53 6.06 20 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER10a ExonRegion 1 13.18 8.16 17.25 5.04 3.31 1.76 3.76 22 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E11_Aa NovelBoundary 0 2.62 5.91 1.95 7.18 5.76 4.50 7.51 24 ER11a ExonRegion 0 16.81 9.04 18.11 9.23 4.80 3.43 7.44 25 E11a_E12a KnownJunction 0 9.26 13.50 13.28 5.80 13.83 2.97 13.77 26 ER12a ExonRegion 0 14.26 11.34 15.42 8.08 6.47 3.66 9.49 27 E12a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER13a ExonRegion 0 4.40 0.43 3.21 0.49 5.13 0.00 2.42 29 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER14a ExonRegion 0 6.68 0.97 5.53 0.63 3.51 1.85 6.27 31 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER15a ExonRegion 0 12.88 14.65 18.98 12.34 14.84 6.80 19.97 33 E15a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER16a ExonRegion 0 11.59 12.22 22.03 13.86 19.63 5.42 26.12 35 E16_Da NovelBoundary 0 13.90 8.59 13.67 2.90 12.75 1.02 6.03 36 E16a_E17a KnownJunction 0 7.21 4.73 18.62 5.04 13.56 3.30 21.27 37 ER17a ExonRegion 0 13.73 9.50 18.44 8.79 15.97 8.50 18.44 38 E17a_E18a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 39 ER18a ExonRegion 0 14.86 5.61 14.85 6.09 12.21 7.03 17.07 40 E18a_E19a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER19a ExonRegion 0 14.59 11.74 15.65 7.39 8.83 10.08 13.09 42 E19a_E20a KnownJunction 0 35.23 21.70 37.78 15.17 19.73 16.16 32.36 43 ER20a ExonRegion 0 9.65 6.63 11.02 4.32 3.12 6.22 10.39 44 E20a_E21a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 ER21a ExonRegion 0 7.66 6.33 10.25 6.33 8.12 2.96 7.95 46 E21a_E22a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 ER22a ExonRegion 0 17.39 10.85 14.74 11.25 10.33 7.65 11.59 48 E22a_E23a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 ER23a ExonRegion 0 12.44 8.70 10.81 7.85 10.28 6.76 10.18 50 E23a_E24a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 I23_AR2 ActiveIntronRegion 1 2.31 2.56 7.00 5.06 9.67 1.23 7.95 52 I23_AR3 ActiveIntronRegion 1 1.89 5.34 12.71 10.92 12.71 1.23 11.55 53 ER24a ExonRegion 0 10.90 2.57 9.73 0.89 8.19 2.80 5.93 54 E24a_E25a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 ER25a ExonRegion 0 0.00 0.00 0.00 0.00 0.15 0.00 0.00 56 E25a_E26a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 ER26a ExonRegion 0 6.41 0.29 7.90 1.26 8.59 0.20 1.61 58 E26a_E27a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 ER27a ExonRegion 1 22.99 3.57 29.99 7.25 20.23 2.04 5.42 60 E27a_E28a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 61 I27 Intron 1 10.91 2.72 13.16 2.08 11.47 2.05 14.05 62 I27_AR2 ActiveIntronRegion 1 16.30 3.62 20.03 2.55 16.80 2.92 20.20 63 E28_Aa NovelBoundary 0 26.19 2.60 24.98 1.27 38.04 4.66 23.27 64 ER28a ExonRegion 0 53.97 19.72 54.22 20.40 48.75 26.39 31.01