Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	HERC2P3	Gene	0	61.46	17.39	63.98	23.65	39.10	15.10	15.17
2	324413	Transcript	0	51.94	14.77	51.97	19.33	32.11	13.46	11.54
3	ER1a	ExonRegion	0	1.54	3.26	3.74	4.14	4.85	1.24	0.68
4	E1a_E2a	KnownJunction	0	0.00	0.00	0.66	0.00	0.00	0.00	0.00
5	ER2a	ExonRegion	0	23.32	12.75	27.68	11.95	18.15	10.65	10.26
6	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER3a	ExonRegion	0	69.85	22.32	80.10	23.23	50.15	25.79	17.43
8	E3a_E4a	KnownJunction	0	57.11	15.79	60.99	21.78	40.41	23.80	16.28
9	E3a_E5a	NovelJunction	1	58.15	6.88	63.17	12.98	20.89	5.98	2.62
10	ER4a	ExonRegion	0	148.29	53.00	133.33	70.06	105.55	57.87	31.76
11	E4a_E5a	KnownJunction	1	335.80	104.06	263.61	103.08	157.29	88.60	37.71
12	ER5a	ExonRegion	0	408.99	100.33	379.21	134.54	227.15	79.49	62.89
13	E5a_E6a	KnownJunction	1	330.98	66.26	347.60	96.44	185.62	78.31	41.83
14	ER6a	ExonRegion	0	253.55	79.94	283.13	101.60	145.36	56.33	53.14
15	E6a_E7a	KnownJunction	0	152.58	56.80	168.19	79.08	102.63	48.99	36.90
16	ER7a	ExonRegion	0	150.15	54.85	192.85	70.59	104.28	49.32	42.77
17	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER8a	ExonRegion	0	40.59	13.30	55.12	21.02	29.55	17.55	13.34
19	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER9a	ExonRegion	0	36.73	2.26	33.85	8.81	9.85	4.30	9.60
21	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER10a	ExonRegion	0	39.32	6.35	46.34	14.22	1.63	7.21	9.19
23	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER11a	ExonRegion	0	70.08	7.15	80.61	18.98	6.47	9.26	10.54
25	E11a_E12a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER12a	ExonRegion	0	19.47	0.48	20.22	0.69	1.21	0.30	3.50
27	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER13a	ExonRegion	0	0.68	0.00	2.67	0.00	6.97	0.54	0.30
29	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER14a	ExonRegion	0	25.30	1.09	28.31	1.46	26.24	1.30	6.48
31	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER15a	ExonRegion	0	24.06	2.30	26.28	2.41	13.68	0.38	3.83
33	E15a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	E16_Aa	NovelBoundary	0	30.86	0.00	36.26	0.00	0.00	0.00	8.68
35	ER16a	ExonRegion	0	13.85	1.32	19.53	5.83	12.59	0.79	1.89
36	E16a_E17a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER17a	ExonRegion	0	31.25	1.91	28.86	5.35	15.99	3.50	9.24
38	E17a_E18a	KnownJunction	0	51.76	3.07	48.24	1.68	24.85	2.81	12.01
39	E18_Aa	NovelBoundary	1	19.36	0.00	17.60	0.00	1.94	0.00	0.00
40	ER18a	ExonRegion	0	48.52	3.12	47.07	3.82	18.06	2.29	16.80
41	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	ER19a	ExonRegion	0	35.74	1.67	39.77	3.44	15.10	1.83	14.34
43	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER20a	ExonRegion	1	31.95	17.11	30.14	16.28	37.74	7.10	18.08
45	E20a_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER21a	ExonRegion	1	61.27	46.28	65.95	51.82	83.39	30.84	35.75
47	E21_Da	NovelBoundary	0	48.93	59.85	93.21	60.01	48.73	29.32	19.69
48	E21a_E22a	KnownJunction	1	60.48	40.96	30.08	54.21	75.84	49.90	40.08
49	E22_Aa	NovelBoundary	0	27.14	19.52	36.64	28.53	9.82	23.53	12.43
50	ER22a	ExonRegion	1	43.58	22.61	36.00	28.69	44.29	22.02	21.64
51	E22a_E23a	KnownJunction	0	46.68	4.10	43.56	5.55	23.95	4.29	9.20
52	ER23a	ExonRegion	0	42.16	7.63	43.00	10.13	19.73	6.24	9.75
53	E23_Da	NovelBoundary	0	6.86	1.63	5.10	0.00	3.27	0.00	8.21
54	E23a_E24a	KnownJunction	0	55.68	5.25	49.02	6.45	10.93	3.00	8.73
55	ER24a	ExonRegion	0	20.83	2.26	21.31	4.22	3.42	1.13	3.99
56	E24a_E25a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
57	ER25a	ExonRegion	0	10.05	2.57	10.56	4.82	10.18	2.02	1.76
58	E25a_E26a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	ER26a	ExonRegion	0	2.78	5.95	1.70	7.96	13.25	3.78	0.00
60	E26a_E27a	KnownJunction	0	4.22	6.83	0.73	12.14	22.55	4.40	0.00
61	I26_AR4	ActiveIntronRegion	0	0.34	3.23	1.19	3.03	10.10	2.34	0.00
62	I26_SR3	SilentIntronRegion	0	0.00	1.42	1.35	3.74	10.80	3.68	0.00
63	I26_AR5	ActiveIntronRegion	0	0.41	0.63	1.52	3.56	8.62	1.18	0.00
64	I26_SR4	SilentIntronRegion	0	0.71	0.85	1.47	2.73	9.12	1.14	0.00
65	I26_AR7	ActiveIntronRegion	0	1.15	1.95	2.17	4.38	16.18	2.73	0.00
66	I26_SR5	SilentIntronRegion	0	1.68	3.42	2.71	4.53	21.50	3.68	0.00
67	I26_AR8	ActiveIntronRegion	0	3.07	1.82	2.54	4.99	23.15	3.68	0.00
68	E27_Aa	NovelBoundary	0	0.88	1.39	0.00	1.68	14.73	0.00	0.00
69	ER27a	ExonRegion	0	3.86	7.98	4.51	18.07	32.94	6.14	0.00
70	IG23_AR21	ActiveIntergenicRegion	0	8.47	7.04	5.80	11.38	37.57	7.47	0.00
71	IG23_SR19	SilentIntergenicRegion	0	1.47	2.24	1.75	8.25	5.73	2.82	0.00
72	IG23_AR20	ActiveIntergenicRegion	0	1.10	1.93	0.99	2.29	7.65	2.06	0.00
73	IG23_SR18	SilentIntergenicRegion	0	0.01	1.39	0.51	3.12	7.66	0.23	0.00
74	IG23_AR18	ActiveIntergenicRegion	0	0.18	0.26	0.46	1.65	7.56	1.80	0.00