Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SNRPN	Gene	0	60.01	72.40	61.21	62.98	2234.23	51.28	181.27
2	400098	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	400100	Transcript	0	0.00	0.00	0.00	0.00	1.11	0.00	0.00
4	400097	Transcript	0	0.00	0.00	0.00	0.00	0.94	0.00	0.00
5	338094	Transcript	0	0.38	1.21	3.05	0.62	46.68	0.00	2.70
6	390687	Transcript	0	0	0	0	0	0	0	0
7	346403	Transcript	0	22.72	6.28	23.44	10.77	857.70	10.38	47.13
8	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	3.20	0.00	0.00
9	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	1.51	0.00	0.00
12	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	1.82	0.00	0.00
13	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	1.88	0.00	0.00
14	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	4.97	0.00	0.00
16	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER5a	ExonRegion	0	0.00	0.12	0.00	0.00	12.24	0.00	0.00
18	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	1.03	0.00	0.00
20	E6_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	13.39	0.00	1.35
21	ER6b	ExonRegion	0	0.59	0.99	0.59	1.06	30.30	0.00	0.67
22	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER7a	ExonRegion	0	0.88	1.99	0.11	0.57	54.07	0.00	2.04
24	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	Ix	Intron	0	16.18	4.15	13.43	2.70	115.01	1.13	9.16
26	Ix_AR1	ActiveIntronRegion	0	20.44	3.77	18.50	2.48	86.06	0.92	9.23
27	Ix_SR3	SilentIntronRegion	0	32.63	4.96	20.28	3.47	200.77	0.44	21.67
28	Ix_AR7	ActiveIntronRegion	0	26.03	16.53	15.22	12.59	454.10	6.63	16.88
29	ER8a	ExonRegion	0	44.60	12.91	49.08	16.18	2752.44	11.45	93.43
30	E8a_E9b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	Ix_AR4	ActiveIntronRegion	0	10.74	5.14	14.80	4.35	114.55	1.22	10.83
32	ER9a	ExonRegion	0	64.16	18.83	68.42	30.55	2516.21	29.42	139.98
33	ER9b	ExonRegion	0	154.95	132.13	154.98	114.98	5090.76	101.02	417.68
34	E9a_E10a	KnownJunction	0	238.83	234.55	245.55	193.00	9109.31	167.47	685.24
35	E9a_E11a	NovelJunction	0	2.92	23.64	2.59	19.91	51.59	9.30	3.48
36	ER10a	ExonRegion	0	223.13	222.27	239.45	190.14	7962.80	165.61	662.56
37	E10a_E11a	KnownJunction	0	194.97	218.81	205.67	180.45	6352.67	190.92	603.98
38	ER11a	ExonRegion	0	161.15	206.08	183.79	175.51	7019.45	134.96	567.16
39	E11a_E12a	KnownJunction	0	114.41	164.41	145.01	150.79	6350.73	131.16	427.95
40	ER12a	ExonRegion	0	94.71	169.29	100.78	133.23	3955.12	107.23	323.92
41	E12a_E13a	KnownJunction	0	88.39	142.23	74.31	135.59	4807.97	116.61	283.38
42	ER13a	ExonRegion	0	92.69	166.26	87.89	147.17	3442.93	115.60	346.44
43	E13a_E14a	KnownJunction	0	116.66	152.64	87.39	135.75	2803.20	118.37	336.95
44	ER14a	ExonRegion	0	103.54	137.74	86.40	135.27	2868.02	105.19	263.67
45	E14a_E15a	KnownJunction	0	90.54	98.83	79.22	103.22	2491.97	99.56	230.02
46	E14a_E16a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER15a	ExonRegion	0	42.41	67.39	37.19	58.09	1212.72	46.80	121.53
48	ER15b	ExonRegion	0	0.77	2.43	6.10	1.25	92.32	0.00	5.40
49	ER16a	ExonRegion	0	3.99	0.00	1.91	1.77	56.90	1.71	1.40
50	IG59	Intergenic	0	8.62	3.48	9.71	2.23	192.17	2.28	7.06
51	IG59_AR1	ActiveIntergenicRegion	0	2.61	0.24	2.30	0.00	10.02	0.00	0.00
52	IG59_SR1	SilentIntergenicRegion	0	3.11	1.11	3.71	0.76	21.88	0.30	2.55
53	IG59_AR2	ActiveIntergenicRegion	0	11.68	5.85	10.73	3.96	204.84	5.21	7.46
54	IG59_SR3	SilentIntergenicRegion	0	6.48	2.89	9.03	0.87	252.22	1.05	4.72
55	IG59_AR4	ActiveIntergenicRegion	0	13.24	5.50	16.63	4.33	349.10	3.52	12.59
56	IG59_SR4	SilentIntergenicRegion	0	9.37	3.17	12.70	0.95	283.74	2.09	12.23
57	IG59_AR5	ActiveIntergenicRegion	0	15.24	3.08	13.83	1.59	314.77	1.56	11.27