Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 HERC2 Gene 0 62.53 29.74 73.72 34.09 123.63 19.85 55.35 2 261609 Transcript 0 60.40 28.38 70.11 31.65 119.80 17.39 51.70 3 ER1a ExonRegion 0 11.83 4.26 8.38 9.13 13.96 6.57 5.57 4 E1a_E2a KnownJunction 0 17.26 16.55 19.74 22.49 4.33 9.92 12.47 5 ER2a ExonRegion 0 14.97 14.55 18.03 16.73 10.33 10.90 15.78 6 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E2a_E4a NovelJunction 0 2.49 0.00 2.96 0.00 19.55 1.47 0.00 8 ER3a ExonRegion 0 41.36 29.49 58.97 26.47 56.08 26.45 36.92 9 E3a_E4a KnownJunction 0 51.52 31.26 70.27 20.97 59.45 33.42 52.31 10 ER4a ExonRegion 0 69.15 40.35 88.30 34.67 70.68 31.78 51.61 11 E4a_E5a KnownJunction 0 46.38 30.08 57.47 25.01 40.48 24.12 34.50 12 E4a_E10a NovelJunction 1 32.76 19.57 26.01 15.71 43.22 12.46 3.90 13 ER5a ExonRegion 0 60.52 38.07 69.76 34.21 47.90 15.16 40.35 14 E5a_E6a KnownJunction 0 45.65 19.89 37.95 19.23 23.24 7.50 24.56 15 ER6a ExonRegion 0 31.16 15.24 31.45 14.58 23.65 12.03 17.71 16 E6a_E7a KnownJunction 0 30.69 7.93 26.84 15.50 20.33 15.62 17.40 17 ER7a ExonRegion 0 21.31 16.51 18.60 15.37 21.91 7.02 18.47 18 E7a_E8a KnownJunction 0 20.95 10.82 18.06 17.34 30.66 10.48 18.65 19 ER8a ExonRegion 0 32.43 21.10 37.94 21.94 48.63 8.88 38.48 20 E8_Da NovelBoundary 1 1.37 0.00 0.00 25.41 2.84 0.00 2.65 21 E8a_E9a KnownJunction 1 36.93 22.28 53.39 29.07 67.45 2.68 46.56 22 ER9a ExonRegion 0 53.96 28.01 59.02 32.58 75.15 10.75 56.65 23 E9_Da NovelBoundary 1 1.50 5.23 6.06 2.95 7.49 1.66 21.01 24 E9a_E10a KnownJunction 1 46.43 31.32 55.44 33.29 51.18 8.04 31.24 25 ER10a ExonRegion 0 41.68 25.48 48.43 27.72 55.86 13.96 34.97 26 E10a_E11a KnownJunction 1 39.37 26.64 48.10 10.40 50.51 12.35 34.65 27 ER11a ExonRegion 0 40.22 25.11 47.71 26.85 56.04 13.27 35.26 28 E11a_E12a KnownJunction 0 26.85 15.18 34.80 21.40 32.48 12.89 29.77 29 ER12a ExonRegion 0 28.42 15.27 28.88 26.89 39.54 8.18 27.48 30 E12a_E13a KnownJunction 1 17.92 16.66 17.83 19.29 26.56 1.61 13.13 31 ER13a ExonRegion 0 22.23 14.99 21.57 18.89 38.52 6.25 19.34 32 E13a_E14a KnownJunction 0 19.38 13.87 25.92 12.87 29.95 2.95 21.34 33 ER14a ExonRegion 1 32.69 20.98 35.54 18.69 53.58 4.73 25.39 34 E14a_E15a KnownJunction 1 58.45 27.59 43.84 20.75 80.87 6.94 31.54 35 ER15a ExonRegion 0 54.83 36.24 65.73 30.08 75.29 12.08 41.63 36 E15a_E16a KnownJunction 0 32.08 30.00 57.19 27.44 58.21 9.70 37.88 37 ER16a ExonRegion 0 29.70 22.18 41.76 22.67 63.67 6.86 39.42 38 E16a_E17a KnownJunction 0 26.04 16.18 36.99 10.76 49.93 6.91 29.51 39 ER17a ExonRegion 0 31.73 18.82 34.99 15.89 49.79 7.00 34.31 40 E17a_E18a KnownJunction 0 47.95 25.38 35.54 13.74 79.76 13.37 29.26 41 E18_Aa NovelBoundary 1 23.10 0.00 13.97 0.00 4.22 0.00 1.33 42 ER18a ExonRegion 0 42.16 21.62 29.65 12.23 46.31 7.99 23.29 43 E18a_E19a KnownJunction 0 58.60 22.88 38.43 24.71 63.60 15.49 40.96 44 ER19a ExonRegion 0 56.45 23.89 51.55 28.21 67.90 18.68 39.22 45 E19a_E20a KnownJunction 0 59.07 36.78 63.93 28.82 64.64 16.54 32.30 46 ER20a ExonRegion 0 65.47 38.45 79.10 35.79 86.84 16.89 43.02 47 E20a_E21a KnownJunction 1 37.55 32.29 73.66 26.96 63.14 6.83 34.05 48 ER21a ExonRegion 1 39.48 26.14 64.30 26.87 65.03 7.41 29.67 49 E21a_E22a KnownJunction 1 47.97 23.78 64.39 21.02 64.57 5.98 18.95 50 ER22a ExonRegion 1 44.69 16.72 47.85 22.33 51.51 8.65 18.75 51 E22a_E23a KnownJunction 1 71.08 12.85 70.44 23.95 65.86 7.99 27.62 52 ER23a ExonRegion 0 83.75 21.19 78.60 29.82 90.46 11.50 40.70 53 E23a_E24a KnownJunction 1 101.22 20.78 96.64 26.77 92.14 15.28 39.94 54 ER24a ExonRegion 0 91.00 36.83 112.01 42.17 94.91 15.39 53.30 55 E24a_E25a KnownJunction 1 68.15 38.57 120.18 30.56 85.57 7.02 41.82 56 ER25a ExonRegion 0 58.41 35.65 92.11 36.14 60.72 16.44 47.98 57 E25a_E26a KnownJunction 0 30.69 27.87 55.00 23.62 47.56 10.32 33.15 58 ER26a ExonRegion 0 32.45 23.76 63.22 25.05 42.55 12.85 38.37 59 E26a_E27a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60 ER27a ExonRegion 0 14.11 5.55 22.81 7.14 17.51 4.84 13.33 61 E27a_E28a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 62 ER28a ExonRegion 1 27.35 11.72 31.02 13.50 32.22 1.77 25.51 63 E28a_E29a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 64 ER29a ExonRegion 0 26.51 11.86 38.79 13.11 29.69 3.09 25.67 65 E29a_E30a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66 ER30a ExonRegion 0 53.44 17.50 71.36 17.29 53.27 9.07 35.30 67 E30a_E31a KnownJunction 0 78.04 27.09 93.58 27.31 83.75 17.90 55.42 68 ER31a ExonRegion 0 65.63 18.11 76.71 15.82 40.97 12.06 38.90 69 E31a_E32a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70 ER32a ExonRegion 1 93.93 15.09 120.14 23.17 84.04 13.33 42.16 71 E32a_E33a KnownJunction 1 104.38 22.33 139.79 28.23 88.94 16.96 46.33 72 ER33a ExonRegion 0 107.45 26.89 144.29 28.54 105.24 13.25 61.21 73 E33a_E34a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74 ER34a ExonRegion 1 69.02 29.64 96.76 30.16 78.06 7.76 47.52 75 E34a_E35a KnownJunction 1 46.53 15.18 58.54 27.96 37.44 2.22 34.27 76 ER35a ExonRegion 0 45.65 29.33 56.90 27.34 64.57 11.55 44.66 77 E35a_E36a KnownJunction 1 32.04 27.30 31.56 26.25 40.04 5.84 39.48 78 ER36a ExonRegion 0 42.89 21.30 41.39 26.11 60.39 10.84 41.55 79 E36a_E37a KnownJunction 0 35.92 8.88 34.63 18.50 36.79 5.68 30.88 80 E37_Aa NovelBoundary 1 23.95 0.00 25.42 0.00 0.00 0.00 0.00 81 ER37a ExonRegion 0 44.33 32.75 69.81 32.79 84.37 13.67 52.74 82 E37a_E38a KnownJunction 0 54.53 43.72 75.23 44.78 127.62 14.74 60.79 83 ER38a ExonRegion 0 40.36 36.84 82.93 44.91 93.04 14.54 61.44 84 E38a_E39a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 85 ER39a ExonRegion 1 33.51 30.22 54.95 38.42 77.42 8.84 48.24 86 E39a_E40a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 87 ER40a ExonRegion 0 38.88 39.11 57.80 39.73 95.97 15.96 74.89 88 E40_Da NovelBoundary 0 2.79 12.58 7.11 3.09 3.07 5.79 11.01 89 E40a_E41a KnownJunction 0 30.04 23.85 37.29 28.69 42.58 18.49 48.47 90 ER41a ExonRegion 0 31.47 27.91 45.76 30.98 55.78 15.45 54.19 91 E41_Da NovelBoundary 1 0.00 0.00 1.14 26.93 2.17 0.00 5.06 92 E41a_E42a KnownJunction 0 39.94 40.90 65.50 48.30 65.31 25.57 47.08 93 ER42a ExonRegion 0 36.43 27.52 52.20 30.50 62.06 14.09 53.82 94 E42a_E43a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 95 ER43a ExonRegion 0 29.28 11.32 39.10 19.30 40.18 8.01 35.61 96 E43a_E44a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 97 ER44a ExonRegion 0 28.84 16.52 41.56 31.56 44.68 11.46 27.48 98 E44a_E45a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 99 ER45a ExonRegion 0 16.40 9.61 25.49 14.95 12.11 4.24 16.70 100 E45a_E46a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 101 ER46a ExonRegion 0 22.25 9.67 21.48 12.19 42.35 5.22 22.28 102 E46a_E47a KnownJunction 0 39.96 30.00 43.20 23.16 116.95 14.31 41.70 103 ER47a ExonRegion 0 52.15 26.32 43.72 23.53 84.74 12.71 43.72 104 E47a_E48a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 105 ER48a ExonRegion 0 140.13 36.72 121.14 38.40 172.92 25.28 95.28 106 E48a_E49a KnownJunction 0 75.84 20.44 64.49 21.21 106.99 16.27 63.45 107 ER49a ExonRegion 0 126.11 28.00 125.70 42.22 207.54 22.12 88.06 108 E49a_E50a KnownJunction 0 106.52 30.69 108.88 42.24 170.82 15.41 62.87 109 ER50a ExonRegion 0 97.57 35.43 115.93 42.67 145.45 18.59 66.65 110 E50a_E51a KnownJunction 1 86.37 26.74 121.21 50.61 200.03 11.90 70.98 111 ER51a ExonRegion 0 84.48 39.25 114.93 47.85 185.29 19.31 67.48 112 E51a_E52a KnownJunction 0 72.45 55.67 87.14 47.19 150.70 21.90 45.49 113 ER52a ExonRegion 0 71.02 50.31 104.07 46.32 143.09 25.50 73.59 114 E52a_E53a KnownJunction 0 70.01 31.16 96.60 23.79 151.57 17.53 71.16 115 ER53a ExonRegion 0 71.73 29.42 77.54 31.51 138.26 21.43 59.06 116 E53a_E54a KnownJunction 0 81.53 30.08 95.45 30.99 141.36 17.82 69.39 117 E54_Aa NovelBoundary 1 31.71 0.00 37.45 0.00 0.99 0.00 1.40 118 ER54a ExonRegion 0 101.40 34.04 109.84 36.57 147.61 17.57 61.92 119 E54a_E55a KnownJunction 0 134.47 48.23 123.81 44.54 162.68 23.99 66.40 120 ER55a ExonRegion 0 122.81 38.73 138.67 34.28 189.04 17.98 72.85 121 E55a_E56a KnownJunction 1 93.66 40.35 112.03 31.26 150.28 7.58 58.50 122 ER56a ExonRegion 0 92.40 29.76 110.64 40.27 151.36 17.76 63.02 123 E56a_E57a KnownJunction 0 55.64 22.99 67.35 41.29 128.89 20.26 42.25 124 ER57a ExonRegion 0 54.93 19.18 71.84 34.04 130.06 21.97 48.28 125 E57a_E58a KnownJunction 0 57.13 14.84 81.19 23.49 154.89 22.86 48.83 126 ER58a ExonRegion 0 52.59 16.47 68.65 22.55 132.51 15.27 51.03 127 E58a_E59a KnownJunction 0 46.45 17.73 52.11 20.70 89.56 6.51 45.01 128 E59_Aa NovelBoundary 1 13.85 1.29 19.82 1.57 6.34 0.00 2.71 129 ER59a ExonRegion 0 41.10 18.48 51.99 22.98 100.50 12.63 43.13 130 E59a_E60a KnownJunction 1 43.73 29.87 59.06 27.82 146.75 4.48 52.93 131 ER60a ExonRegion 0 54.74 26.42 63.60 25.27 140.81 13.24 53.84 132 E60a_E61a KnownJunction 0 54.31 29.35 70.24 23.03 132.88 19.38 51.23 133 ER61a ExonRegion 0 61.44 28.63 66.52 24.27 113.14 13.15 55.33 134 E61_Da NovelBoundary 1 36.28 2.78 39.20 1.35 7.49 0.00 6.39 135 E61a_E62a KnownJunction 0 70.03 26.80 78.52 37.52 129.97 10.40 46.71 136 ER62a ExonRegion 0 66.94 29.91 63.58 31.20 159.95 14.40 49.01 137 E62a_E63a KnownJunction 0 59.35 25.51 60.54 23.08 120.84 15.76 49.26 138 ER63a ExonRegion 0 74.00 35.73 80.58 31.46 156.84 16.52 83.67 139 E63_Da NovelBoundary 0 29.82 12.79 26.43 12.90 28.89 6.46 42.58 140 E63a_E64a KnownJunction 0 51.07 28.29 57.90 21.97 121.51 9.92 58.14 141 ER64a ExonRegion 0 48.72 26.56 53.62 29.32 111.94 17.27 59.64 142 E64a_E65a KnownJunction 0 45.25 20.12 48.14 30.78 117.32 15.25 50.37 143 ER65a ExonRegion 0 75.07 25.95 77.60 33.64 174.97 16.41 72.76 144 E65a_E66a KnownJunction 0 151.46 42.87 151.87 48.60 228.02 26.67 83.27 145 ER66a ExonRegion 0 162.18 42.46 163.64 60.96 245.06 36.56 97.47 146 E66a_E67a KnownJunction 0 114.89 34.28 122.55 42.45 196.13 36.47 91.18 147 ER67a ExonRegion 0 71.36 27.65 68.19 33.46 125.33 26.37 66.64 148 E67a_E68a KnownJunction 0 92.05 38.57 100.85 34.22 193.76 26.59 105.57 149 ER68a ExonRegion 0 63.70 30.26 69.11 34.46 114.01 19.55 66.58 150 E68a_E69a KnownJunction 0 70.21 44.90 66.88 37.41 135.67 16.16 73.66 151 ER69a ExonRegion 0 61.80 32.81 58.37 39.03 140.27 16.38 64.64 152 E69a_E70a KnownJunction 1 79.43 31.16 57.45 40.61 120.27 8.79 65.64 153 ER70a ExonRegion 0 51.86 33.97 40.91 36.27 129.68 14.06 57.29 154 E70a_E71a KnownJunction 1 81.93 47.37 53.03 37.58 174.83 6.57 86.29 155 ER71a ExonRegion 0 58.71 37.42 49.07 28.81 141.95 16.27 62.35 156 E71a_E72a KnownJunction 0 32.76 35.97 35.93 35.25 107.24 15.46 60.69 157 ER72a ExonRegion 0 46.18 35.70 48.16 30.88 143.17 18.64 63.29 158 E72a_E73a KnownJunction 0 35.52 30.19 42.92 31.24 146.02 18.14 45.99 159 ER73a ExonRegion 0 58.34 32.66 68.71 41.24 151.61 21.13 58.10 160 E73a_E74a KnownJunction 0 67.49 39.20 62.30 48.55 93.53 18.57 51.21 161 ER74a ExonRegion 0 126.20 36.40 133.26 53.88 245.49 22.47 84.13 162 E74a_E75a KnownJunction 0 113.68 34.91 142.51 54.26 341.32 21.68 89.71 163 ER75a ExonRegion 0 151.52 38.70 169.74 55.51 289.89 23.20 95.52 164 E75a_E76a KnownJunction 0 142.67 44.79 155.49 37.36 303.81 17.07 96.25 165 ER76a ExonRegion 0 119.01 37.58 136.92 53.09 263.88 24.31 103.24 166 E76a_E77a KnownJunction 0 101.41 49.23 131.09 56.32 184.75 31.86 77.22 167 ER77a ExonRegion 0 98.72 47.91 124.19 54.45 252.23 32.51 97.78 168 E77a_E78a KnownJunction 0 67.18 39.04 84.21 49.20 245.65 20.50 72.89 169 ER78a ExonRegion 0 66.82 28.29 94.03 38.36 213.74 27.03 72.71 170 E78a_E79a KnownJunction 0 49.34 26.14 61.84 40.56 244.73 32.24 70.93 171 ER79a ExonRegion 0 77.33 35.60 104.32 50.68 220.48 29.89 93.13 172 E79a_E80a KnownJunction 0 65.06 22.70 88.13 49.50 224.26 19.35 85.82 173 ER80a ExonRegion 0 60.92 27.59 68.30 37.38 169.07 20.87 68.54 174 E80a_E81a KnownJunction 0 52.79 29.16 64.44 33.92 137.86 16.11 59.05 175 ER81a ExonRegion 0 81.66 34.04 84.76 39.05 221.35 24.98 62.97 176 E81a_E82a KnownJunction 0 180.48 42.51 158.68 66.59 395.73 30.58 103.10 177 ER82a ExonRegion 0 195.44 61.80 175.34 72.96 349.80 43.50 118.48 178 E82a_E83a KnownJunction 0 175.83 67.83 176.78 75.31 282.54 47.86 115.11 179 ER83a ExonRegion 0 156.47 46.36 151.91 70.51 344.04 38.21 112.77 180 E83a_E84a KnownJunction 0 119.68 50.15 122.98 47.22 340.84 45.61 116.56 181 ER84a ExonRegion 0 76.01 35.09 111.38 50.77 235.47 31.24 91.01 182 E84a_E85a KnownJunction 0 62.94 32.60 94.30 48.85 217.69 35.19 76.37 183 ER85a ExonRegion 0 58.83 33.89 95.60 44.26 183.09 25.84 68.88 184 E85a_E86a KnownJunction 0 48.40 37.80 75.93 38.74 155.03 29.88 60.58 185 ER86a ExonRegion 0 50.08 36.16 88.47 33.80 192.27 37.93 58.63 186 E86a_E87a KnownJunction 0 44.01 32.08 93.32 27.88 176.19 30.12 57.50 187 E87_Aa NovelBoundary 1 19.61 1.39 29.56 0.00 0.90 1.05 2.77 188 ER87a ExonRegion 0 48.89 35.58 82.73 39.89 152.28 41.96 79.45 189 E87_Da NovelBoundary 1 24.67 1.21 28.81 0.00 3.11 1.26 5.02 190 E87a_E88a KnownJunction 0 51.32 42.45 81.06 42.70 141.91 51.05 69.98 191 ER88a ExonRegion 0 57.30 53.12 79.34 51.23 190.27 47.20 84.45 192 E88a_E89a KnownJunction 0 71.40 60.56 90.72 61.25 300.29 35.19 96.98 193 ER89a ExonRegion 0 75.37 57.22 84.27 56.06 230.62 38.59 82.36 194 E89a_E90a KnownJunction 0 112.52 75.95 117.56 88.91 307.29 42.34 89.41 195 ER90a ExonRegion 0 130.53 59.99 138.45 70.04 353.69 54.28 110.57 196 E90a_E91a KnownJunction 0 140.66 56.09 138.08 69.00 287.95 44.09 88.47 197 ER91a ExonRegion 0 120.83 50.81 130.31 61.95 374.85 53.17 109.78 198 E91a_E92a KnownJunction 0 84.23 48.37 100.16 52.01 398.26 51.03 99.86 199 ER92a ExonRegion 0 83.14 50.86 107.36 70.17 270.85 48.90 98.52 200 E92a_E93a KnownJunction 0 98.42 67.41 127.05 80.05 324.38 62.15 95.50 201 ER93a ExonRegion 0 63.86 35.50 73.70 41.98 176.37 45.35 54.16