Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZNF839	Gene	0	28.12	15.01	17.88	9.15	33.55	7.27	21.79
2	262236	Transcript	0	21.69	6.53	8.33	2.87	24.73	2.07	8.68
3	398436	Transcript	0	10.77	4.97	9.54	0.62	16.78	0.74	6.79
4	ER1a	ExonRegion	0	0.44	1.67	0.65	0.80	0.69	0.37	0.19
5	E1a_E2a	KnownJunction	0	1.67	2.71	1.64	1.68	8.92	2.49	0.00
6	I1	Intron	0	9.75	2.99	5.47	0.99	8.41	0.73	6.10
7	I1_AR1	ActiveIntronRegion	0	13.66	6.73	5.21	2.37	6.06	1.87	6.71
8	I1_SR2	SilentIntronRegion	0	9.38	2.17	5.78	0.67	9.51	0.43	6.32
9	E2_Aa	NovelBoundary	0	11.02	1.55	4.53	1.19	7.26	1.05	7.62
10	ER2a	ExonRegion	0	25.66	16.02	19.24	6.28	30.22	5.34	23.12
11	E2a_E3a	KnownJunction	0	20.78	9.06	8.92	4.14	27.48	3.30	8.73
12	E2a_E4a	KnownJunction	0	1.92	0.00	0.00	0.00	2.31	0.00	0.00
13	E2a_E5a	NovelJunction	0	6.44	5.78	4.34	0.00	23.12	0.00	15.49
14	ER3a	ExonRegion	0	34.59	10.57	17.21	6.02	37.24	4.13	19.07
15	E3_Da	NovelBoundary	0	1.55	1.97	0.63	8.67	2.10	0.00	4.79
16	E3a_E4a	KnownJunction	1	50.49	13.00	14.83	4.20	56.30	2.95	14.10
17	I3_SR2	SilentIntronRegion	0	1.07	3.60	0.55	5.27	8.17	3.37	4.48
18	ER4a	ExonRegion	1	82.34	13.02	25.77	1.27	71.76	1.75	25.36
19	E4a_E5a	KnownJunction	1	102.29	10.22	42.91	0.00	65.84	2.84	33.64
20	E5_Aa	NovelBoundary	0	79.71	20.65	51.00	15.36	36.58	19.83	36.14
21	ER5a	ExonRegion	0	143.37	32.10	61.48	9.93	167.96	9.04	63.61
22	E5_Da	NovelBoundary	0	17.16	16.63	21.79	11.87	17.24	7.37	9.43
23	E5a_E6a	KnownJunction	0	70.95	12.43	26.97	4.09	66.95	1.45	30.81
24	ER6a	ExonRegion	0	51.67	14.22	26.69	8.34	52.73	4.80	28.02
25	E6_Da	NovelBoundary	0	0.68	10.43	1.68	5.58	1.18	2.65	3.34
26	E6a_E7a	KnownJunction	1	33.15	6.65	10.71	10.67	40.43	2.81	29.47
27	ER7a	ExonRegion	0	31.63	10.07	17.26	7.77	43.82	2.32	20.52
28	E7a_E8a	KnownJunction	0	19.61	9.93	19.08	1.25	31.26	1.47	13.59
29	E7b_E8a	KnownJunction	0	1.03	0.00	0.00	0.00	1.15	0.00	0.83
30	ER7b	ExonRegion	0	1.54	0.00	0.68	0.00	1.48	0.00	0.67
31	I7_AR1	ActiveIntronRegion	1	12.31	3.93	3.88	8.11	13.19	4.79	9.40
32	E8_Aa	NovelBoundary	0	15.57	16.92	11.18	24.41	26.83	13.19	16.07
33	ER8a	ExonRegion	0	15.88	16.80	14.77	14.01	22.27	11.43	20.79
34	IG2	Intergenic	0	6.75	6.11	8.11	9.66	8.35	5.21	9.94
35	IG2_AR1	ActiveIntergenicRegion	0	7.02	8.06	9.20	15.98	4.78	9.80	15.15
36	IG2_SR3	SilentIntergenicRegion	0	14.85	4.84	13.21	7.13	19.77	1.79	8.21
37	IG2_AR5	ActiveIntergenicRegion	0	21.85	3.64	15.19	7.84	43.27	1.40	7.71
38	IG2_SR4	SilentIntergenicRegion	0	6.90	1.66	7.95	4.29	23.97	0.00	4.40
39	IG2_AR7	ActiveIntergenicRegion	0	7.81	4.90	8.01	4.27	14.31	1.34	9.18