Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PSEN1	Gene	0	189.22	149.53	123.84	96.52	93.73	163.52	149.62
2	394157	Transcript	0	13.33	2.78	9.36	1.73	1.71	1.36	1.86
3	357710	Transcript	0	0	0	0	0	0	0	0
4	261970	Transcript	0	2.74	0.00	3.19	1.68	0.00	1.02	0.00
5	324501	Transcript	0	0	0	0	0	0	0	0
6	344094	Transcript	0	5.40	4.41	1.39	0.69	0.74	3.11	1.46
7	394164	Transcript	0	19.01	9.14	8.13	7.73	2.31	13.20	8.36
8	406768	Transcript	0	14.07	8.85	4.28	2.40	2.72	3.54	2.28
9	IG35	Intergenic	0	12.27	8.08	9.77	8.28	10.44	10.45	7.56
10	IG35_AR1	ActiveIntergenicRegion	0	26.50	27.15	31.03	26.51	44.47	32.02	13.69
11	IG35_SR1	SilentIntergenicRegion	0	8.36	5.21	6.30	5.14	8.62	8.94	4.38
12	IG35_AR2	ActiveIntergenicRegion	0	16.54	9.77	12.18	11.16	10.54	15.71	8.74
13	ER1a	ExonRegion	0	6.09	5.83	3.52	3.19	7.09	3.24	11.93
14	ER1b	ExonRegion	0	32.09	67.96	35.33	38.32	33.20	87.60	64.31
15	E1a_E3a	KnownJunction	0	42.89	96.52	58.43	55.48	15.42	118.78	92.81
16	ER2a	ExonRegion	0	33.86	18.29	13.38	9.20	3.50	14.71	15.07
17	E2_Da	NovelBoundary	0	75.71	30.42	36.01	14.44	9.73	17.82	23.23
18	E2a_E3a	KnownJunction	1	4.16	0.00	2.87	6.26	1.13	11.68	1.66
19	I2_AR1	ActiveIntronRegion	0	60.48	18.28	24.90	10.80	5.25	6.70	19.16
20	I2_AR2	ActiveIntronRegion	0	41.07	12.39	11.69	9.56	4.51	6.25	14.05
21	I2_AR8	ActiveIntronRegion	0	40.47	15.59	14.79	4.99	1.21	9.19	10.68
22	I2_AR9	ActiveIntronRegion	0	38.95	13.55	15.53	3.26	1.62	8.20	11.26
23	I2_AR11	ActiveIntronRegion	0	39.71	11.54	13.72	3.87	1.79	7.66	16.96
24	I2_AR14	ActiveIntronRegion	0	55.56	11.93	21.53	5.11	3.64	5.14	16.89
25	I2_SR3	SilentIntronRegion	0	54.87	16.64	26.28	6.23	10.61	6.50	26.44
26	I2_AR15	ActiveIntronRegion	0	65.17	13.44	27.31	6.62	9.11	7.59	30.06
27	ER3a	ExonRegion	0	66.84	146.86	70.12	73.43	26.07	157.27	110.46
28	E3a_E4a	KnownJunction	0	118.87	212.85	108.48	117.82	33.77	215.36	142.21
29	ER4a	ExonRegion	0	170.54	266.65	159.79	166.65	98.14	283.21	231.64
30	E4_Da	NovelBoundary	1	32.26	65.89	31.03	52.04	41.98	69.20	53.87
31	E4a_E6a	KnownJunction	0	65.74	141.84	63.36	82.28	75.61	126.33	128.14
32	E4b_E6a	KnownJunction	0	48.60	144.34	35.44	71.74	64.62	112.56	87.29
33	ER4b	ExonRegion	0	42.46	136.06	36.41	76.06	64.92	116.37	86.57
34	ER5a	ExonRegion	0	23.23	6.62	7.04	3.71	5.45	2.39	4.57
35	E5a_E6a	KnownJunction	1	4.92	11.09	1.52	1.08	0.00	4.69	0.00
36	ER6a	ExonRegion	0	204.53	347.17	156.41	198.73	123.03	324.67	290.60
37	E6a_E7a	KnownJunction	0	255.26	335.59	217.45	168.70	182.92	310.31	296.99
38	ER7a	ExonRegion	0	305.61	323.58	234.25	157.98	185.25	263.05	290.80
39	E7_Da	KnownBoundary	0	17.46	7.28	8.38	4.88	4.15	1.34	2.85
40	E7a_E8a	KnownJunction	0	407.87	350.07	287.97	183.30	264.05	281.42	322.27
41	E7a_E9a	NovelJunction	1	1.03	1.31	0.00	0.00	0.00	9.65	0.66
42	ER7b	ExonRegion	0	13.33	2.78	9.36	1.73	1.71	1.36	1.86
43	ER8a	ExonRegion	0	518.68	350.93	371.90	174.87	237.12	319.46	354.62
44	E8a_E9a	KnownJunction	0	541.34	376.02	381.22	169.54	172.50	319.56	307.68
45	ER9a	ExonRegion	0	570.09	368.00	339.37	205.77	252.64	332.48	348.17
46	E9a_E10a	KnownJunction	0	440.88	296.58	238.19	188.23	203.33	266.90	277.17
47	E9a_E11a	NovelJunction	1	28.51	28.08	11.53	9.05	2.03	23.61	6.84
48	ER10a	ExonRegion	0	420.81	332.07	257.75	221.71	239.55	327.47	287.46
49	E10a_E11a	KnownJunction	0	425.73	335.59	304.82	266.17	220.13	385.57	319.38
50	ER11a	ExonRegion	0	391.51	315.90	282.18	227.21	175.95	341.12	331.71
51	E11_Da	NovelBoundary	1	87.36	17.39	11.11	1.03	3.16	7.08	6.19
52	E11a_E12a	KnownJunction	0	4.07	2.15	1.47	0.00	0.00	1.61	0.00
53	E11a_E13a	KnownJunction	0	393.58	257.38	279.78	213.59	192.58	296.51	289.18
54	E11a_E14a	KnownJunction	0	2.74	0.00	3.19	1.68	0.00	1.02	0.00
55	ER12a	ExonRegion	0	11.24	8.04	1.80	2.06	2.22	5.56	4.38
56	E12a_E13a	KnownJunction	0	0.88	3.05	0.89	0.00	0.00	2.17	0.00
57	ER13a	ExonRegion	0	298.59	311.18	219.65	207.55	180.41	295.07	298.15
58	E13a_E14a	KnownJunction	0	294.38	315.23	237.34	217.84	169.02	305.49	312.63
59	ER14a	ExonRegion	0	237.83	340.03	219.82	215.53	160.17	370.85	321.02
60	E14a_E15a	KnownJunction	0	216.70	345.29	240.99	192.89	178.64	398.78	327.67
61	ER15a	ExonRegion	0	411.74	268.79	261.15	194.18	203.75	349.09	304.11
62	IG36	Intergenic	0	30.64	21.86	17.51	11.77	15.54	18.21	18.93
63	IG36_AR1	ActiveIntergenicRegion	0	103.57	71.74	61.71	39.70	56.41	62.44	65.44
64	IG36_SR1	SilentIntergenicRegion	0	13.29	2.65	1.63	0.90	0.51	1.33	0.37