Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PTPN21	Gene	0	53.49	45.27	72.96	53.01	48.89	38.81	47.20
2	328736	Transcript	0	81.99	68.65	115.52	76.46	71.28	54.76	64.36
3	ER1a	ExonRegion	0	16.83	48.06	26.20	45.07	10.25	27.56	21.55
4	E1a_E2a	KnownJunction	1	21.46	44.37	46.30	44.86	6.96	16.56	22.61
5	ER2a	ExonRegion	0	40.15	63.35	70.94	57.59	29.61	36.87	35.51
6	E2a_E3a	KnownJunction	0	47.15	42.72	73.56	37.55	33.70	37.01	24.79
7	E2a_E4a	NovelJunction	0	2.44	8.30	3.87	2.60	2.19	1.05	0.00
8	ER3a	ExonRegion	1	91.35	67.04	146.05	85.80	54.45	53.54	47.95
9	E3a_E4a	KnownJunction	1	107.08	74.09	157.64	109.83	60.10	67.29	52.38
10	ER4a	ExonRegion	1	137.53	98.74	191.04	113.13	74.61	78.95	63.53
11	E4a_E5a	KnownJunction	1	139.14	120.35	218.69	128.38	68.28	87.02	67.19
12	ER5a	ExonRegion	1	149.50	123.97	208.94	129.49	94.79	83.30	68.02
13	E5a_E6a	KnownJunction	1	147.96	100.78	174.69	91.32	120.77	74.77	54.77
14	ER6a	ExonRegion	0	106.31	97.84	145.68	79.27	78.35	76.33	60.99
15	E6a_E7a	KnownJunction	0	57.28	77.19	126.43	63.66	66.51	56.95	57.41
16	E6a_E8a	NovelJunction	1	5.16	15.00	8.81	17.04	2.14	1.10	3.35
17	E6a_E9a	NovelJunction	0	1.03	1.63	0.00	9.05	0.00	0.00	0.00
18	ER7a	ExonRegion	0	105.79	87.70	147.30	73.11	78.43	64.78	71.81
19	E7a_E8a	KnownJunction	0	120.75	111.68	161.85	76.83	123.31	59.31	72.16
20	E8_Aa	NovelBoundary	1	46.77	0.00	67.01	0.00	3.16	0.00	1.38
21	ER8a	ExonRegion	0	116.65	109.41	173.17	97.06	98.78	71.50	113.36
22	E8a_E9a	KnownJunction	0	99.87	105.24	136.60	93.55	82.37	67.70	107.08
23	ER9a	ExonRegion	0	83.12	86.97	122.08	83.66	72.98	56.69	80.17
24	E9a_E10a	KnownJunction	0	58.93	50.31	104.23	61.44	66.28	48.19	66.76
25	ER10a	ExonRegion	0	79.21	64.35	131.06	90.78	94.20	64.25	120.01
26	E10a_E11a	KnownJunction	0	84.75	66.49	120.51	109.10	126.12	64.32	132.62
27	ER11a	ExonRegion	0	73.36	76.01	104.21	85.15	91.83	55.08	103.79
28	E11a_E12a	KnownJunction	0	53.29	91.24	87.50	95.90	113.14	51.70	90.20
29	ER12a	ExonRegion	0	22.75	33.32	29.62	41.49	23.51	26.60	34.23
30	E12a_E13a	KnownJunction	0	46.20	28.92	77.71	34.76	27.57	34.52	33.76
31	ER13a	ExonRegion	0	60.83	35.66	83.81	49.34	64.62	42.88	46.30
32	E13a_E14a	KnownJunction	0	116.48	34.63	125.81	56.86	93.27	50.17	54.04
33	ER14a	ExonRegion	0	147.02	61.04	163.01	78.37	97.51	61.50	84.59
34	E14_Da	NovelBoundary	1	14.90	5.44	4.87	1.68	8.39	2.63	3.32
35	E14a_E15a	KnownJunction	0	103.98	64.79	135.93	82.79	105.70	41.89	87.36
36	ER15a	ExonRegion	0	79.63	54.26	107.96	76.53	85.04	51.58	67.92
37	E15_Da	NovelBoundary	0	9.91	15.37	12.07	4.44	7.70	3.06	7.31
38	E15a_E16a	KnownJunction	0	42.48	33.18	56.62	64.34	49.26	50.38	47.41
39	I15	Intron	1	5.33	11.24	8.31	2.98	2.61	0.99	6.79
40	I15_AR1	ActiveIntronRegion	1	5.37	11.34	8.39	3.00	2.63	1.00	6.86
41	E16_Aa	NovelBoundary	1	8.88	18.55	11.51	1.54	4.54	4.05	10.36
42	ER16a	ExonRegion	0	53.44	52.94	76.71	70.99	61.16	50.97	59.99
43	E16a_E17a	KnownJunction	0	79.39	41.32	89.74	76.02	71.63	62.79	56.04
44	ER17a	ExonRegion	0	62.26	63.74	75.85	74.63	66.04	57.74	58.83
45	E17a_E18a	KnownJunction	0	65.54	57.04	74.42	74.74	51.55	51.46	43.93
46	ER18a	ExonRegion	0	52.34	34.15	71.47	42.85	52.00	34.31	43.55