Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NAT12	Gene	0	57.24	35.92	105.99	69.25	62.69	55.04	63.37
2	298406	Transcript	0	0.48	7.37	3.20	23.60	3.24	11.35	3.20
3	395257	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	IG6_SR1	SilentIntergenicRegion	0	6.60	2.50	11.67	2.34	11.41	2.99	5.11
5	IG6_AR1	ActiveIntergenicRegion	0	7.39	3.82	10.89	2.09	14.34	2.04	7.50
6	IG6_SR2	SilentIntergenicRegion	0	12.00	5.19	17.85	2.65	21.17	2.70	13.80
7	IG6_AR2	ActiveIntergenicRegion	0	8.81	3.66	15.33	3.08	16.24	2.31	9.57
8	IG6_AR3	ActiveIntergenicRegion	0	7.95	3.56	15.79	2.91	15.65	3.31	9.86
9	IG6_SR3	SilentIntergenicRegion	0	5.92	3.03	14.77	1.56	10.90	0.99	9.07
10	IG6_AR4	ActiveIntergenicRegion	0	4.90	3.65	13.48	1.64	8.08	0.00	5.14
11	IG6_AR5	ActiveIntergenicRegion	0	4.06	1.75	12.94	0.03	5.03	0.37	7.46
12	IG6_SR4	SilentIntergenicRegion	0	6.36	3.17	11.02	0.80	11.21	2.24	8.76
13	IG6_AR6	ActiveIntergenicRegion	0	6.62	3.12	10.36	2.02	14.45	1.73	8.29
14	ER1a	ExonRegion	0	0.00	6.53	1.22	17.07	2.49	7.04	0.34
15	E1a_E2a	KnownJunction	0	0.00	5.41	1.39	19.13	1.15	8.87	0.69
16	ER2a	ExonRegion	1	0.77	6.07	2.03	18.70	0.81	6.13	0.00
17	ER2b	ExonRegion	0	3.94	13.90	6.59	27.62	2.57	18.23	11.05
18	E2_Da	KnownBoundary	1	7.13	12.53	15.52	45.65	6.73	29.40	30.05
19	E2a_E2c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER2c	ExonRegion	0	1.17	11.45	8.15	39.49	8.51	23.35	11.78
21	E2_Ac	KnownBoundary	1	3.91	17.13	15.52	41.64	3.14	34.33	19.06
22	ER2d	ExonRegion	0	23.71	41.35	46.37	69.49	35.25	53.69	43.94
23	E2b_E3a	KnownJunction	0	38.69	52.78	133.77	103.19	82.53	87.96	94.44
24	E2b_E5a	NovelJunction	0	0.92	3.13	2.92	8.86	0.00	11.04	0.00
25	ER3a	ExonRegion	0	71.68	58.65	156.06	103.43	102.63	77.76	113.49
26	E3a_E4a	KnownJunction	0	67.56	61.79	143.24	120.77	126.24	109.85	111.36
27	E3a_E5a	NovelJunction	0	0.63	5.94	6.45	1.52	0.00	8.01	0.00
28	ER4a	ExonRegion	0	78.46	69.51	195.73	134.65	128.77	93.31	153.22
29	E4a_E5a	KnownJunction	0	76.06	61.95	204.58	127.06	149.15	81.85	167.31
30	ER5a	ExonRegion	0	77.79	37.30	139.66	74.05	78.85	61.39	75.23
31	IG7_AR1	ActiveIntergenicRegion	0	42.76	23.95	89.98	54.19	77.46	50.95	74.63
32	IG7_SR1	SilentIntergenicRegion	0	9.67	7.06	15.43	13.12	20.87	12.21	11.75
33	IG7_AR2	ActiveIntergenicRegion	0	18.37	15.43	38.90	23.87	42.45	21.67	21.93
34	IG7_SR2	SilentIntergenicRegion	0	8.78	9.20	20.42	10.69	0.00	17.78	14.12
35	IG7_AR3	ActiveIntergenicRegion	0	17.81	10.87	28.40	28.16	34.66	31.08	16.33