Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CHD8	Gene	0	109.32	95.27	156.68	124.51	264.41	70.66	122.05
2	399982	Transcript	0	49.33	64.86	81.58	84.03	114.50	31.54	68.98
3	262707	Transcript	0	1.28	0.00	2.71	0.00	0.00	0.00	0.00
4	IG29	Intergenic	0	4.58	3.46	4.73	3.38	8.14	2.09	4.83
5	IG29_AR20	ActiveIntergenicRegion	0	4.66	12.65	12.61	12.43	37.46	7.19	12.62
6	IG29_AR19	ActiveIntergenicRegion	0	8.11	2.52	9.09	3.63	12.17	1.28	2.98
7	IG29_AR18	ActiveIntergenicRegion	0	7.73	2.81	12.49	1.79	10.88	2.99	3.54
8	IG29_AR17	ActiveIntergenicRegion	0	9.57	2.95	15.83	1.50	12.59	2.82	5.65
9	IG29_AR16	ActiveIntergenicRegion	0	8.92	3.64	12.19	2.49	17.01	2.45	5.92
10	IG29_AR15	ActiveIntergenicRegion	0	6.92	3.10	10.46	2.36	12.69	2.45	4.50
11	IG29_AR14	ActiveIntergenicRegion	0	3.24	1.38	5.34	1.06	11.63	1.23	3.49
12	IG29_AR13	ActiveIntergenicRegion	0	5.25	1.21	7.00	0.00	12.01	1.23	3.37
13	IG29_AR11	ActiveIntergenicRegion	0	6.53	1.08	5.15	0.96	7.55	0.57	5.64
14	IG29_AR9	ActiveIntergenicRegion	0	7.19	0.49	4.43	2.40	12.16	0.16	5.39
15	IG29_AR8	ActiveIntergenicRegion	0	6.24	0.86	3.55	0.00	7.72	1.23	2.52
16	IG29_AR5	ActiveIntergenicRegion	0	7.16	1.12	2.77	0.71	7.75	0.38	3.68
17	IG29_AR4	ActiveIntergenicRegion	0	5.46	1.09	2.23	0.59	8.17	0.47	3.59
18	IG29_AR2	ActiveIntergenicRegion	0	9.96	11.87	7.59	6.36	31.92	5.64	12.63
19	IG29_SR1	SilentIntergenicRegion	0	15.14	41.90	24.44	36.23	66.41	24.50	26.50
20	IG29_AR1	ActiveIntergenicRegion	0	42.44	79.04	76.25	99.33	78.42	59.72	50.85
21	ER1a	ExonRegion	0	44.19	64.46	83.94	85.79	93.78	37.67	63.20
22	E1a_E3a	KnownJunction	0	54.48	65.26	79.21	82.28	135.23	25.41	74.75
23	ER2a	ExonRegion	0	1.28	0.00	2.71	0.00	0.00	0.00	0.00
24	ER3a	ExonRegion	0	51.23	97.55	77.51	105.43	100.31	57.20	82.02
25	E3a_E4a	KnownJunction	0	48.82	52.81	65.54	68.73	64.85	41.62	50.36
26	ER4a	ExonRegion	0	55.27	74.90	86.07	104.55	111.94	56.34	76.93
27	E4a_E5a	KnownJunction	0	67.49	79.16	120.04	121.72	197.47	49.07	90.76
28	ER5a	ExonRegion	0	81.21	87.39	128.12	126.46	169.33	63.11	118.21
29	E5a_E6a	KnownJunction	0	72.12	96.81	130.15	123.05	132.81	63.49	113.85
30	ER6a	ExonRegion	0	83.23	93.36	144.76	109.47	174.03	45.53	103.43
31	E6a_E7a	KnownJunction	0	73.59	92.40	121.54	93.92	142.19	48.61	80.14
32	ER7a	ExonRegion	0	76.21	97.44	142.74	101.69	143.47	52.38	95.29
33	E7a_E8a	KnownJunction	0	64.54	93.50	149.98	103.03	172.62	51.70	101.04
34	ER8a	ExonRegion	0	76.57	101.74	161.39	122.69	196.49	59.68	102.24
35	E8a_E9a	KnownJunction	0	82.26	90.93	135.51	108.53	206.92	48.35	83.70
36	ER9a	ExonRegion	0	100.04	83.40	149.21	97.77	187.44	43.78	99.01
37	E9a_E10a	KnownJunction	0	108.95	94.92	149.32	108.36	193.07	46.60	84.05
38	ER10a	ExonRegion	0	100.93	98.48	149.30	103.41	186.98	53.65	91.33
39	E10a_E11a	KnownJunction	0	108.65	81.86	149.08	85.53	172.62	34.63	85.43
40	ER11a	ExonRegion	0	147.76	90.82	195.77	121.68	225.71	46.46	93.66
41	E11a_E12a	KnownJunction	0	129.46	98.10	183.05	117.93	331.66	55.82	104.91
42	ER12a	ExonRegion	0	166.53	77.86	223.53	117.52	239.83	65.48	101.82
43	E12a_E13a	KnownJunction	0	139.59	81.49	166.41	111.05	197.29	54.54	92.77
44	ER13a	ExonRegion	0	131.07	81.32	173.63	111.89	279.90	58.77	114.91
45	E13a_E14a	KnownJunction	0	160.14	91.63	166.21	126.16	339.18	46.93	121.06
46	ER14a	ExonRegion	0	193.51	114.29	230.82	138.53	351.48	66.97	146.36
47	E14a_E15a	KnownJunction	1	280.16	104.38	310.17	151.09	512.33	81.61	143.39
48	ER15a	ExonRegion	1	254.50	121.13	295.17	146.38	343.24	79.40	146.51
49	E15a_E16a	KnownJunction	0	205.32	103.12	237.00	117.60	330.12	61.34	120.31
50	E16_Aa	NovelBoundary	1	62.50	0.00	98.47	0.00	0.00	0.00	0.00
51	ER16a	ExonRegion	0	127.70	71.18	197.41	87.70	234.61	39.48	114.58
52	E16a_E17a	KnownJunction	0	103.09	53.17	168.58	75.96	165.66	30.15	103.99
53	ER17a	ExonRegion	0	87.31	64.85	165.06	95.86	209.94	43.93	105.26
54	E17a_E18a	KnownJunction	0	83.25	64.97	149.01	101.62	205.26	33.96	94.04
55	ER18a	ExonRegion	0	73.75	71.61	134.26	87.43	214.35	35.65	108.28
56	E18a_E19a	KnownJunction	0	96.53	72.14	132.83	97.99	231.50	40.01	116.59
57	ER19a	ExonRegion	0	80.57	91.23	156.21	108.34	281.13	43.36	129.33
58	E19a_E20a	KnownJunction	0	124.77	114.83	187.16	118.58	283.99	49.47	153.39
59	ER20a	ExonRegion	0	198.65	100.97	224.56	106.83	469.97	52.94	147.99
60	E20a_E21a	KnownJunction	1	300.37	146.96	288.10	151.52	484.41	98.11	165.69
61	ER21a	ExonRegion	1	383.35	143.22	324.70	186.13	563.00	97.31	171.67
62	E21a_E22a	KnownJunction	1	390.03	125.58	312.48	199.07	726.37	101.92	191.28
63	ER22a	ExonRegion	0	200.05	72.80	188.41	114.88	316.73	50.88	123.71
64	E22a_E23a	KnownJunction	0	130.63	76.82	187.85	104.82	266.54	38.78	101.18
65	ER23a	ExonRegion	0	120.06	72.39	175.70	102.99	268.35	47.24	115.58
66	E23a_E24a	KnownJunction	0	153.10	75.24	197.74	93.95	298.86	60.84	119.72
67	ER24a	ExonRegion	0	192.96	100.35	234.17	124.07	352.53	77.27	154.73
68	E24a_E25a	KnownJunction	0	166.05	92.97	231.25	149.33	365.60	78.74	162.76
69	ER25a	ExonRegion	0	161.69	98.51	203.28	131.10	352.95	64.58	147.26
70	E25a_E26a	KnownJunction	0	157.32	78.68	169.33	124.32	387.40	48.78	139.40
71	ER26a	ExonRegion	0	123.13	83.26	182.65	137.60	325.52	45.81	147.24
72	E26a_E27a	KnownJunction	0	120.12	101.51	171.31	116.36	326.36	46.90	126.79
73	ER27a	ExonRegion	0	139.44	117.01	214.62	154.39	322.63	62.01	151.17
74	E27a_E28a	KnownJunction	0	142.08	129.31	208.77	180.78	315.99	70.38	143.17
75	ER28a	ExonRegion	0	129.81	128.69	200.37	167.78	280.90	59.25	135.47
76	E28a_E29a	KnownJunction	0	117.51	109.95	179.77	168.94	279.63	58.85	130.85
77	E28a_E30a	NovelJunction	1	1.79	1.60	4.34	0.00	0.00	8.25	0.00
78	ER29a	ExonRegion	0	123.62	129.24	186.65	174.05	340.15	66.89	154.73
79	E29a_E30a	KnownJunction	0	99.20	120.32	145.37	128.71	394.57	51.32	120.40
80	ER30a	ExonRegion	0	155.69	119.65	201.85	155.77	433.69	78.76	137.27
81	E30a_E31a	KnownJunction	0	283.13	129.91	340.62	203.10	535.52	122.39	211.09
82	ER31a	ExonRegion	0	221.52	128.14	263.06	191.25	427.03	117.75	190.14
83	E31a_E32a	KnownJunction	0	174.71	104.98	204.63	142.96	480.26	71.13	146.75
84	ER32a	ExonRegion	0	72.37	113.00	131.64	137.70	249.79	94.20	138.35
85	E32a_E33a	KnownJunction	0	73.87	126.47	145.61	157.64	283.23	113.68	158.51
86	ER33a	ExonRegion	0	77.68	116.55	154.95	145.21	341.50	100.05	158.94
87	E33a_E34a	KnownJunction	0	71.13	115.83	151.71	129.39	345.77	111.57	145.51
88	ER34a	ExonRegion	0	83.66	121.71	151.45	166.37	349.95	102.18	155.34
89	E34a_E35a	KnownJunction	0	109.09	129.31	176.32	162.22	473.57	107.82	150.01
90	ER35a	ExonRegion	0	113.94	131.50	172.26	184.73	399.76	112.85	160.84
91	E35a_E36a	KnownJunction	0	93.78	106.08	147.87	163.09	360.45	117.89	108.39
92	E35a_E37a	NovelJunction	1	6.39	6.33	9.59	6.31	14.71	1.02	42.58
93	ER36a	ExonRegion	0	99.91	106.10	168.01	142.62	385.97	100.51	125.17
94	E36a_E37a	KnownJunction	0	90.69	113.60	173.56	139.63	326.91	110.66	131.53
95	ER37a	ExonRegion	0	88.41	107.45	178.94	148.55	386.39	113.60	138.93
96	E37a_E38a	KnownJunction	0	88.29	92.92	184.60	150.55	445.27	85.57	157.00
97	ER38a	ExonRegion	0	69.61	86.90	103.04	121.98	248.55	95.14	122.32