Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PCCA	Gene	0	61.67	13.67	43.54	17.58	229.38	14.23	33.37
2	376279	Transcript	0	12.43	1.26	7.99	1.11	43.50	2.63	1.36
3	376277	Transcript	0	0.70	1.03	0.00	0.06	7.15	0.00	0.61
4	376285	Transcript	0	0	0	0	0	0	0	0
5	376286	Transcript	0	0.64	0.00	0.34	0.10	6.88	0.00	0.22
6	376254	Transcript	0	8.48	2.50	9.09	3.64	18.21	2.49	3.20
7	IG25_SR2	SilentIntergenicRegion	0	0.94	0.26	1.51	0.39	9.10	0.26	1.25
8	IG25_AR4	ActiveIntergenicRegion	0	3.41	2.97	4.91	2.11	53.00	1.49	16.45
9	ER1a	ExonRegion	0	15.14	4.48	4.55	4.05	40.23	1.30	7.34
10	E1a_E2a	KnownJunction	0	3.15	6.09	3.16	4.50	15.42	0.00	1.45
11	ER2a	ExonRegion	0	24.08	12.37	16.47	7.48	36.95	5.96	16.52
12	E2a_E3a	KnownJunction	0	48.03	10.56	36.72	9.24	70.84	9.11	32.58
13	ER3a	ExonRegion	0	86.51	16.58	61.68	16.08	156.82	15.50	45.07
14	E3a_E4a	KnownJunction	0	74.24	18.84	59.31	14.63	250.75	25.83	39.60
15	ER4a	ExonRegion	0	67.27	23.63	47.43	19.32	262.69	25.34	41.22
16	E4a_E5a	KnownJunction	0	69.73	20.31	37.59	30.59	184.40	11.74	36.47
17	ER5a	ExonRegion	0	62.88	24.17	49.80	34.31	171.97	21.06	38.24
18	E5a_E6a	KnownJunction	0	82.13	34.39	67.40	34.32	217.23	27.15	35.57
19	ER6a	ExonRegion	0	102.98	31.02	72.52	30.55	285.04	21.59	50.82
20	E6a_E7a	KnownJunction	0	97.37	22.20	63.52	25.74	362.69	12.01	52.64
21	ER7a	ExonRegion	0	75.17	35.51	59.16	31.28	277.07	19.35	49.50
22	E7a_E8a	KnownJunction	0	69.03	22.28	45.87	20.32	225.23	13.37	33.87
23	ER8a	ExonRegion	0	68.97	23.31	49.91	17.26	231.25	10.14	45.29
24	E8a_E9a	KnownJunction	1	49.74	20.15	38.83	9.97	228.71	4.74	35.43
25	ER9a	ExonRegion	0	42.46	17.58	39.19	14.43	217.59	9.53	37.53
26	E9a_E10a	KnownJunction	0	41.96	15.24	38.67	10.84	219.72	16.16	35.97
27	ER10a	ExonRegion	0	67.09	10.93	47.52	13.11	268.78	12.01	36.41
28	E10a_E12a	KnownJunction	0	105.48	12.27	59.88	12.16	249.59	10.16	44.80
29	E10b_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER10b	ExonRegion	0	0.77	0.00	0.34	0.31	13.77	0.00	0.67
31	ER11a	ExonRegion	0	1.15	0.00	0.68	0.00	6.88	0.00	0.00
32	ER12a	ExonRegion	0	71.48	15.06	55.83	16.50	190.27	13.09	29.57
33	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER13a	ExonRegion	0	78.83	18.38	60.60	20.70	259.32	16.64	31.52
35	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER14a	ExonRegion	0	48.24	23.04	46.14	18.09	240.67	16.56	27.48
37	E14a_E15a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	ER15a	ExonRegion	0	58.12	18.84	41.38	20.65	296.50	11.33	33.08
39	E15a_E17a	KnownJunction	0	70.18	16.00	40.22	20.48	403.47	6.91	33.99
40	ER16a	ExonRegion	0	4.73	1.19	5.60	2.56	17.46	2.41	1.96
41	E16a_E17a	KnownJunction	0	12.23	3.81	12.57	4.71	18.95	2.57	4.44
42	ER17a	ExonRegion	0	95.01	13.26	56.25	20.37	367.00	8.65	44.92
43	E17a_E18a	KnownJunction	0	102.99	10.59	51.76	14.55	377.49	12.49	46.68
44	ER18a	ExonRegion	0	108.38	10.65	70.83	15.49	434.19	15.52	48.98
45	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER19a	ExonRegion	0	133.81	14.07	74.26	22.69	376.14	24.25	60.74
47	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	ER20a	ExonRegion	0	95.59	9.85	80.17	17.06	407.99	19.35	50.99
49	E20a_E21a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	ER21a	ExonRegion	0	63.47	9.15	57.41	15.38	304.18	17.00	37.46
51	E21a_E22a	KnownJunction	0	62.25	6.49	52.71	12.14	335.37	7.69	35.08
52	ER22a	ExonRegion	0	71.60	8.37	44.08	20.17	259.80	10.98	34.04
53	E22a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	ER23a	ExonRegion	1	63.25	10.06	35.56	34.15	278.51	17.23	30.16
55	E23a_E24a	KnownJunction	0	62.35	8.62	32.98	24.33	291.62	12.81	27.37
56	E23a_E26a	KnownJunction	0	12.43	1.26	7.99	1.11	43.50	2.63	1.36
57	ER24a	ExonRegion	1	68.57	6.51	30.73	24.83	271.77	15.64	34.78
58	E24a_E25a	KnownJunction	0	0.00	1.50	0.00	0.00	8.16	0.00	0.79
59	E24a_E26a	KnownJunction	0	36.48	5.31	18.16	17.04	159.66	13.24	29.71
60	ER25a	ExonRegion	0	2.11	1.59	0.00	0.18	13.30	0.00	1.05
61	E25a_E26a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
62	ER26a	ExonRegion	1	66.97	8.69	38.60	15.14	286.56	22.43	36.54
63	E26_Da	NovelBoundary	1	35.42	0.00	16.86	0.00	4.10	0.00	1.56
64	E26a_E27a	KnownJunction	1	80.04	6.70	33.30	14.06	219.16	27.98	33.16
65	ER27a	ExonRegion	0	30.92	5.21	24.02	10.98	139.90	12.21	23.44