Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TPP2	Gene	0	184.31	141.94	186.51	227.49	323.60	177.64	88.30
2	376052	Transcript	0	73.72	33.44	61.69	33.27	140.59	32.94	36.77
3	376065	Transcript	0	326.62	143.15	330.73	266.06	714.85	245.83	121.56
4	376047	Transcript	0	6.54	16.62	4.70	9.98	18.04	17.35	3.08
5	376043	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	5.66	13.69	8.68	11.45	16.93	19.62	7.36
7	ER1b	ExonRegion	0	28.84	57.18	26.51	79.05	25.95	71.43	18.06
8	E1a_E2a	KnownJunction	0	94.40	108.50	92.44	173.90	54.31	176.10	40.33
9	ER2a	ExonRegion	0	122.40	190.79	128.52	257.22	154.10	225.95	59.07
10	E2a_E3a	KnownJunction	1	2.79	14.76	1.55	5.23	6.94	20.53	3.45
11	E2a_E4a	KnownJunction	0	123.02	233.74	127.02	268.42	112.08	238.46	44.47
12	E3_Aa	NovelBoundary	0	108.85	77.16	109.82	86.99	6.71	81.39	71.33
13	ER3a	ExonRegion	0	10.29	18.48	7.86	14.74	29.15	14.18	2.71
14	ER4a	ExonRegion	0	155.48	222.95	175.18	276.20	126.50	237.79	57.69
15	E4a_E5a	KnownJunction	0	152.90	196.93	184.56	257.64	152.59	224.42	71.16
16	ER5a	ExonRegion	0	121.40	160.75	170.66	240.45	187.35	186.47	59.36
17	E5a_E6a	KnownJunction	0	91.24	116.49	165.04	205.97	185.78	127.89	61.54
18	ER6a	ExonRegion	0	123.45	154.26	177.94	265.78	205.39	161.92	70.74
19	E6a_E7a	KnownJunction	0	117.83	161.86	169.57	253.92	223.04	154.23	79.53
20	ER7a	ExonRegion	0	139.41	211.60	201.60	286.80	242.37	190.64	81.74
21	E7a_E8a	KnownJunction	0	107.67	192.33	146.86	258.80	222.09	181.11	72.23
22	ER8a	ExonRegion	0	136.46	181.30	171.66	240.21	258.30	150.88	67.08
23	E8a_E9a	KnownJunction	0	150.01	154.53	174.00	216.48	300.59	141.80	59.46
24	ER9a	ExonRegion	0	233.44	167.32	226.58	274.14	398.96	156.77	84.87
25	E9a_E10a	KnownJunction	0	307.65	189.18	263.24	279.39	374.72	160.50	87.85
26	E9a_E11a	NovelJunction	0	11.02	7.28	0.62	15.33	0.00	18.14	0.00
27	ER10a	ExonRegion	0	300.89	215.85	273.14	300.31	384.26	203.13	99.85
28	E10a_E11a	KnownJunction	0	316.74	212.69	245.88	320.49	458.61	209.12	94.76
29	ER11a	ExonRegion	0	272.91	212.28	232.13	310.24	379.60	179.03	105.33
30	E11a_E12a	KnownJunction	0	186.11	157.29	164.57	257.58	268.27	138.29	84.21
31	ER12a	ExonRegion	0	179.96	162.51	163.70	279.96	350.40	126.03	99.19
32	E12a_E13a	KnownJunction	0	189.28	199.98	191.47	293.94	347.29	143.35	104.35
33	E12a_E14a	NovelJunction	0	3.17	23.54	2.14	24.49	0.00	20.31	1.43
34	ER13a	ExonRegion	0	210.93	200.86	210.11	314.49	337.45	180.87	113.04
35	E13a_E14a	KnownJunction	0	268.74	219.47	252.83	357.09	404.42	193.12	134.77
36	ER14a	ExonRegion	0	192.96	163.48	233.02	247.89	368.08	164.56	108.19
37	E14a_E15a	KnownJunction	0	115.96	86.30	160.37	105.74	304.07	88.79	68.06
38	ER15a	ExonRegion	0	162.53	137.51	209.56	240.06	335.32	139.68	92.33
39	E15_Da	NovelBoundary	1	77.22	1.21	85.79	0.00	1.08	0.00	0.89
40	E15a_E16a	KnownJunction	0	216.37	129.54	232.34	263.35	409.49	152.87	98.94
41	ER16a	ExonRegion	0	233.01	145.91	229.91	282.10	420.72	183.55	114.51
42	E16a_E17a	KnownJunction	0	218.24	193.88	223.13	325.39	390.68	244.31	112.79
43	ER17a	ExonRegion	0	283.09	175.31	262.05	314.11	510.09	224.17	123.68
44	E17a_E18a	KnownJunction	0	288.84	170.76	247.44	280.37	530.12	226.43	121.11
45	ER18a	ExonRegion	0	260.79	181.69	243.41	320.67	528.12	201.82	141.33
46	E18a_E19a	KnownJunction	0	181.32	198.14	208.20	333.82	433.95	212.15	127.94
47	ER19a	ExonRegion	0	150.71	190.85	216.86	315.32	447.72	216.68	144.30
48	E19a_E20a	KnownJunction	0	173.66	210.41	233.58	337.45	480.44	269.39	141.48
49	ER20a	ExonRegion	0	139.45	162.51	213.06	286.78	396.88	191.96	113.24
50	E20_Da	NovelBoundary	0	22.36	62.34	19.92	59.41	13.28	48.05	25.31
51	E20a_E21a	KnownJunction	0	106.23	112.00	190.03	219.19	342.77	121.94	102.41
52	I20	Intron	0	67.49	44.90	57.01	50.86	26.32	37.70	23.79
53	I20_AR3	ActiveIntronRegion	0	64.00	45.95	54.44	50.28	23.99	34.32	23.36
54	I20_SR1	SilentIntronRegion	0	112.97	53.24	90.48	72.04	44.71	66.14	35.37
55	E21_Aa	NovelBoundary	0	90.29	48.89	78.36	73.39	34.10	52.45	36.07
56	ER21a	ExonRegion	0	155.58	131.79	236.97	256.63	388.66	188.85	120.88
57	E21a_E22a	KnownJunction	0	171.01	145.07	265.43	263.73	361.12	205.58	136.91
58	ER22a	ExonRegion	0	239.84	156.58	283.13	253.80	610.28	219.11	134.91
59	E22a_E23a	KnownJunction	0	606.56	170.74	472.99	286.54	1229.43	255.99	186.90
60	E23_Aa	NovelBoundary	1	336.52	3.57	251.21	2.82	9.31	0.00	1.35
61	ER23a	ExonRegion	0	659.07	271.14	553.36	481.21	914.52	432.69	205.56
62	E23a_E24a	KnownJunction	0	242.02	205.13	231.59	305.94	524.29	281.40	95.81
63	ER24a	ExonRegion	0	317.62	194.01	297.65	303.50	520.43	253.75	126.46
64	E24a_E25a	KnownJunction	0	54.71	28.27	45.41	28.09	109.96	19.97	22.59
65	E24a_E27a	KnownJunction	0	326.62	143.15	330.73	266.06	714.85	245.83	121.56
66	ER25a	ExonRegion	0	80.29	34.08	71.49	35.01	133.71	35.77	42.71
67	E25a_E27a	KnownJunction	0	86.15	37.96	68.17	36.71	178.11	43.07	45.01
68	ER26a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
69	E27_Aa	NovelBoundary	0	43.98	35.36	17.10	12.98	35.71	20.85	27.47
70	ER27a	ExonRegion	0	342.05	192.51	321.40	328.89	580.03	296.70	139.50
71	E27a_E28a	KnownJunction	0	315.27	195.30	316.58	361.53	536.30	304.69	158.59
72	ER28a	ExonRegion	0	296.38	211.79	298.07	353.39	522.49	314.02	143.14
73	E28a_E29a	KnownJunction	0	299.73	232.19	293.59	332.41	528.23	270.49	154.98
74	ER29a	ExonRegion	0	252.05	184.91	241.24	294.38	564.79	255.40	128.41
75	E29a_E30a	KnownJunction	0	207.54	138.58	206.89	250.86	443.67	232.51	108.56
76	ER30a	ExonRegion	0	209.10	169.28	199.53	254.62	391.21	249.45	111.47
77	E30a_E31a	KnownJunction	0	221.41	135.93	216.20	242.60	322.97	263.23	126.76
78	E30a_E32a	NovelJunction	0	3.54	3.26	1.54	4.61	0.00	8.31	0.00
79	ER31a	ExonRegion	0	152.02	128.51	178.31	219.80	259.79	267.98	106.25
80	E31a_E32a	KnownJunction	0	125.74	124.87	163.29	176.01	254.87	255.99	85.70
81	ER32a	ExonRegion	0	97.24	60.60	82.15	108.36	167.13	110.13	49.33
82	IG33_AR1	ActiveIntergenicRegion	0	4.28	6.67	3.81	6.22	3.80	13.00	1.72