Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MED4	Gene	0	104.27	95.12	185.08	112.23	202.37	139.89	116.16
2	378586	Transcript	0	26.13	3.15	24.17	0.86	59.13	5.69	18.16
3	258648	Transcript	0	17.36	45.52	38.43	42.26	47.55	49.79	20.94
4	378594	Transcript	0	0.35	1.28	1.37	0.05	0.83	1.24	0.03
5	ER1a	ExonRegion	0	0.55	0.00	0.34	0.04	2.14	0.00	0.55
6	ER1b	ExonRegion	0	39.87	23.17	56.24	21.99	210.49	27.19	27.18
7	E1_Da	KnownBoundary	0	55.64	66.57	147.57	62.77	374.22	74.96	66.91
8	E1a_E3a	KnownJunction	1	51.71	6.31	48.01	1.68	116.12	11.39	35.77
9	ER1c	ExonRegion	0	10.73	41.49	28.54	37.37	63.99	49.32	16.14
10	E1b_E3a	KnownJunction	0	24.23	82.44	52.01	70.19	43.13	79.68	29.82
11	E1b_E4a	NovelJunction	1	0.00	7.51	0.00	1.68	0.00	14.74	0.00
12	I1_SR1	SilentIntronRegion	0	21.82	14.48	20.17	5.61	6.82	3.32	5.58
13	ER2a	ExonRegion	0	0.70	0.37	1.15	0.11	0.75	0.81	0.07
14	E2a_E3a	KnownJunction	0	0.00	2.18	1.60	0.00	0.90	1.66	0.00
15	ER3a	ExonRegion	0	106.51	117.01	199.18	128.08	114.45	153.94	116.32
16	E3a_E4a	KnownJunction	0	148.21	142.39	345.58	186.58	131.42	243.32	168.44
17	ER4a	ExonRegion	0	225.62	228.24	387.17	244.66	398.22	320.75	210.39
18	E4a_E5a	KnownJunction	0	204.07	192.94	317.84	224.67	367.25	250.63	198.86
19	E4a_E6a	NovelJunction	1	0.65	7.91	4.02	9.92	0.00	37.09	0.77
20	ER5a	ExonRegion	0	226.83	216.08	347.47	220.28	390.61	264.08	218.66
21	E5a_E6a	KnownJunction	0	217.74	210.01	330.47	185.01	503.57	232.57	224.30
22	ER6a	ExonRegion	0	241.88	207.55	374.76	207.66	502.45	273.13	306.71
23	E6a_E7a	KnownJunction	0	191.63	181.30	320.50	208.55	334.13	288.12	257.62
24	ER7a	ExonRegion	0	147.35	205.02	256.17	224.00	352.46	276.82	259.68
25	E7a_E8a	KnownJunction	0	143.02	187.92	282.26	223.96	407.53	241.31	284.52
26	E8_Aa	NovelBoundary	1	58.28	4.89	119.22	1.35	0.00	1.15	0.00
27	ER8a	ExonRegion	0	121.08	135.00	265.99	165.68	314.78	202.74	197.25
28	E8_Da	KnownBoundary	0	200.83	90.06	334.97	135.67	296.57	195.05	165.17
29	ER8b	ExonRegion	0	167.91	93.37	271.35	133.59	235.44	167.99	118.96
30	E8_Db	KnownBoundary	0	31.89	10.19	53.43	17.09	79.39	34.84	21.40
31	ER8c	ExonRegion	0	17.11	12.64	34.73	19.22	35.52	20.38	16.84
32	IG48_AR4	ActiveIntergenicRegion	0	7.09	3.30	8.89	1.97	4.89	0.33	5.14
33	IG48_AR2	ActiveIntergenicRegion	0	9.12	4.95	9.46	5.80	8.56	2.54	2.74
34	IG48_SR1	SilentIntergenicRegion	0	9.02	5.33	12.17	3.79	7.03	3.43	4.90