Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	NEK3	Gene	0	22.08	9.93	13.70	3.47	55.91	4.45	27.41
2	400357	Transcript	0	1.37	8.28	5.04	1.06	29.28	0.00	5.22
3	339406	Transcript	0	0	0	0	0	0	0	0
4	258597	Transcript	0	0.00	0.00	0.02	0.00	0.00	0.00	0.00
5	378101	Transcript	0	0.34	0.52	0.23	0.00	1.19	0.00	0.45
6	IG48_AR2	ActiveIntergenicRegion	0	4.44	4.65	3.36	0.82	22.00	1.42	4.41
7	ER1a	ExonRegion	0	0.28	1.01	0.70	0.69	0.54	0.66	0.67
8	E1_Ab	KnownBoundary	0	1.40	0.00	1.29	0.00	1.94	0.00	0.89
9	ER1b	ExonRegion	0	7.77	1.88	5.85	0.00	21.57	1.33	9.69
10	E1a_E3a	KnownJunction	0	14.74	4.05	13.12	0.00	45.25	2.89	20.25
11	ER2a	ExonRegion	0	0.03	1.03	0.47	0.00	1.43	0.00	0.32
12	E2a_E3a	KnownJunction	0	0.65	0.00	0.00	0.00	0.95	0.00	0.57
13	ER3a	ExonRegion	0	10.52	5.92	10.62	1.63	19.03	1.57	15.42
14	E3a_E4a	KnownJunction	0	23.52	12.01	20.15	0.00	22.66	1.66	33.44
15	E4_Aa	NovelBoundary	0	6.66	0.00	2.31	0.00	11.64	0.00	7.85
16	ER4a	ExonRegion	0	18.29	9.62	16.61	0.27	54.86	2.57	29.71
17	E4a_E5a	KnownJunction	0	16.39	12.64	16.97	1.38	55.86	7.93	35.83
18	ER5a	ExonRegion	0	31.32	15.58	20.82	5.41	59.13	8.16	42.49
19	E5a_E6a	KnownJunction	0	33.03	12.98	27.88	6.56	71.42	7.21	37.29
20	ER6a	ExonRegion	0	33.18	13.68	24.85	4.10	76.04	6.63	40.44
21	E6a_E7a	KnownJunction	0	42.43	9.22	19.07	10.78	67.91	10.24	42.48
22	ER7a	ExonRegion	0	50.33	11.84	24.83	8.45	77.39	9.21	48.62
23	E7a_E8a	KnownJunction	0	43.63	13.90	33.02	4.39	72.39	6.19	44.41
24	ER8a	ExonRegion	0	38.20	20.08	30.96	6.45	102.85	5.89	50.35
25	E8a_E9a	KnownJunction	0	44.14	19.62	25.41	7.72	177.00	0.00	46.95
26	ER9a	ExonRegion	0	63.92	20.10	30.49	5.33	170.20	7.82	65.91
27	E9a_E10a	KnownJunction	0	63.84	16.55	26.60	3.74	113.35	13.61	64.09
28	ER10a	ExonRegion	0	38.32	18.77	21.61	5.01	97.13	11.08	49.84
29	E10a_E11a	KnownJunction	0	30.44	16.24	13.18	4.12	48.71	6.24	21.12
30	ER11a	ExonRegion	0	28.33	13.62	17.88	4.24	81.82	7.58	34.13
31	E11a_E12a	KnownJunction	0	12.33	3.23	11.51	2.95	37.39	4.50	26.61
32	E11a_E13a	KnownJunction	0	1.37	8.28	5.04	1.06	29.28	0.00	5.22
33	E11b_E12b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER11b	ExonRegion	0	0.00	0.00	0.04	0.00	0.00	0.00	0.00
35	E12_Ab	NovelBoundary	0	10.70	2.26	12.01	0.00	25.45	0.00	19.33
36	ER12a	ExonRegion	0	17.16	3.48	13.95	2.49	40.17	3.76	33.19
37	ER12b	ExonRegion	0	13.60	4.86	15.67	1.25	37.68	7.56	29.78
38	E12a_E13a	KnownJunction	0	11.28	7.41	13.22	1.35	30.55	11.26	27.53
39	ER13a	ExonRegion	0	25.02	13.78	17.97	1.56	68.39	5.94	31.25
40	E13a_E14a	KnownJunction	0	33.45	11.85	24.42	0.00	78.38	1.66	44.59
41	ER14a	ExonRegion	0	42.87	10.07	22.37	2.92	96.74	2.81	45.67
42	E14a_E15a	KnownJunction	0	31.96	5.46	18.91	4.33	73.84	3.48	29.21
43	E14a_E16a	NovelJunction	1	2.34	4.54	1.37	1.68	10.83	0.00	11.16
44	ER15a	ExonRegion	0	41.25	10.44	15.62	3.91	84.03	5.32	34.87
45	E15a_E16a	KnownJunction	0	20.66	10.14	14.86	4.50	60.10	7.13	28.58
46	ER16a	ExonRegion	0	27.10	11.55	14.64	4.98	81.22	5.60	32.85
47	E16a_E17a	KnownJunction	0	20.21	19.52	10.88	1.30	76.86	5.12	31.87
48	ER17a	ExonRegion	0	15.26	10.68	10.17	5.27	50.40	3.97	22.87
49	ER17b	ExonRegion	0	0.96	0.00	0.68	0.00	1.01	0.00	0.00