Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ATXN2	Gene	0	82.71	102.08	104.55	191.78	138.58	223.64	74.21
2	377611	Transcript	0	0.67	8.80	0.89	2.68	0.00	4.50	0.00
3	377617	Transcript	0	0	0	0	0	0	0	0
4	389153	Transcript	0	44.87	60.67	48.31	161.82	97.74	158.01	41.99
5	389154	Transcript	0	38.14	62.56	55.70	111.16	153.70	136.73	38.83
6	392645	Transcript	0	13.09	6.12	9.10	8.35	15.42	4.19	6.79
7	IG28	Intergenic	0	6.52	5.99	9.74	6.80	9.06	7.52	6.64
8	IG28_AR3	ActiveIntergenicRegion	0	36.46	35.97	55.47	35.48	51.48	44.46	34.37
9	ER1a	ExonRegion	0	1.58	10.30	1.03	15.28	1.36	15.41	1.29
10	E1_Ab	KnownBoundary	0	32.09	59.61	15.32	76.15	12.68	77.91	10.46
11	ER1b	ExonRegion	1	49.48	60.39	32.98	98.90	40.22	93.08	17.38
12	E1a_E3a	KnownJunction	1	57.13	59.90	44.94	100.24	89.51	85.01	23.04
13	E1a_E6a	NovelJunction	0	0.95	8.35	2.82	13.19	0.00	16.24	0.00
14	E1a_E7a	NovelJunction	0	0.83	9.27	0.89	8.67	0.00	13.16	0.00
15	ER2a	ExonRegion	0	5.91	5.10	3.79	5.79	2.29	3.39	2.30
16	E2a_E3a	KnownJunction	0	5.56	0.00	7.85	6.01	11.78	0.00	5.82
17	ER3a	ExonRegion	1	159.61	94.89	139.96	172.45	174.62	159.25	53.73
18	E3a_E4a	KnownJunction	1	187.33	102.54	175.48	178.77	202.82	178.62	62.34
19	ER4a	ExonRegion	1	190.87	169.23	198.20	272.36	149.78	287.03	73.76
20	E4a_E5a	KnownJunction	0	150.91	189.97	165.47	244.88	139.12	312.11	70.58
21	E4a_E6a	KnownJunction	0	11.18	21.07	3.71	36.38	0.95	24.79	0.00
22	ER5a	ExonRegion	1	213.20	168.29	237.16	265.24	178.63	296.52	86.84
23	E5a_E6a	KnownJunction	1	241.74	150.80	279.27	269.07	256.02	260.04	101.51
24	ER6a	ExonRegion	0	172.80	164.99	241.25	315.18	230.03	297.05	94.09
25	E6a_E7a	KnownJunction	0	125.56	178.67	213.27	321.25	171.81	299.25	95.82
26	ER7a	ExonRegion	0	111.82	198.71	208.31	328.27	161.06	310.96	109.46
27	E7a_E8a	KnownJunction	0	131.62	185.11	200.01	294.83	187.17	275.90	97.44
28	ER8a	ExonRegion	0	150.80	214.49	223.67	316.47	211.97	314.73	116.68
29	E8a_E9a	KnownJunction	0	134.24	206.02	233.04	317.51	154.89	337.65	124.67
30	E8a_E10a	NovelJunction	1	5.02	17.76	7.30	1.08	1.04	6.35	0.69
31	ER9a	ExonRegion	0	135.93	159.78	219.89	277.00	186.32	288.73	91.65
32	E9_Da	NovelBoundary	0	23.20	16.10	40.90	40.88	9.54	21.57	18.85
33	E9a_E10a	KnownJunction	0	98.77	115.78	176.73	201.34	166.90	259.23	78.44
34	ER10a	ExonRegion	0	99.39	160.84	179.29	239.13	164.17	278.35	90.23
35	E10a_E11a	KnownJunction	0	82.06	136.85	105.38	231.82	151.20	256.88	70.75
36	E10a_E12a	NovelJunction	1	5.54	5.88	32.25	15.33	13.19	20.72	19.48
37	ER11a	ExonRegion	0	65.05	113.81	85.41	203.96	111.29	216.19	58.41
38	E11a_E12a	KnownJunction	0	38.64	109.53	79.40	195.68	78.66	220.83	56.28
39	ER12a	ExonRegion	0	74.21	119.69	114.07	220.94	125.00	245.65	72.83
40	E12_Da	KnownBoundary	0	0.00	2.18	4.91	1.54	5.53	3.73	6.02
41	E12a_E13a	KnownJunction	0	87.17	115.38	128.57	236.34	133.08	261.43	68.48
42	E12a_E14a	NovelJunction	0	4.69	7.72	10.85	8.37	6.55	12.44	5.03
43	ER12b	ExonRegion	1	27.82	13.25	15.66	13.26	32.19	9.18	12.27
44	E12_Db	NovelBoundary	1	333.05	196.43	691.37	192.21	177.14	492.18	88.93
45	ER13a	ExonRegion	0	100.65	133.02	138.63	275.07	139.16	271.94	74.03
46	E13a_E14a	KnownJunction	0	103.34	140.63	133.54	262.08	126.77	270.17	75.60
47	ER14a	ExonRegion	0	92.26	149.80	180.06	322.05	175.46	335.75	97.45
48	E14a_E15a	KnownJunction	0	105.10	144.91	194.27	398.89	217.07	408.03	103.77
49	ER15a	ExonRegion	0	120.13	148.90	217.95	358.41	184.27	383.94	114.48
50	E15a_E16a	KnownJunction	0	117.13	142.55	221.09	314.18	175.50	323.79	123.38
51	ER16a	ExonRegion	0	183.39	194.89	284.32	394.20	291.77	475.20	147.92
52	E16a_E17a	KnownJunction	0	198.96	204.23	249.57	359.58	435.51	477.06	152.66
53	E16a_E18a	NovelJunction	1	50.64	38.30	32.79	72.17	1.11	125.42	2.36
54	ER17a	ExonRegion	0	209.37	210.08	281.71	388.06	403.85	480.61	177.10
55	E17a_E18a	KnownJunction	0	168.87	192.67	240.99	410.84	383.78	476.10	184.36
56	ER18a	ExonRegion	0	185.75	253.66	258.13	472.55	398.53	550.54	201.78
57	E18a_E19a	KnownJunction	0	201.66	237.89	247.23	465.56	428.67	572.58	193.65
58	E18a_E20a	KnownJunction	0	0.67	8.80	0.89	2.68	0.00	4.50	0.00
59	ER19a	ExonRegion	0	146.86	217.16	178.25	368.00	361.83	449.54	150.42
60	E19_Da	NovelBoundary	0	27.72	50.55	42.49	93.22	89.01	111.09	28.85
61	E19a_E20a	KnownJunction	0	51.39	77.42	47.57	125.40	141.06	139.95	53.69
62	E19b_E20a	KnownJunction	0	51.42	86.91	77.50	153.74	235.78	190.04	53.97
63	ER19b	ExonRegion	0	59.81	98.61	87.16	175.20	222.71	200.86	61.16
64	ER20a	ExonRegion	0	173.13	249.50	187.74	479.77	382.98	566.70	206.90
65	E20a_E21a	KnownJunction	0	192.90	288.54	221.91	550.17	366.40	732.73	265.95
66	ER21a	ExonRegion	0	165.25	276.86	191.30	562.30	398.43	699.95	227.37
67	E21a_E22a	KnownJunction	0	59.15	153.35	55.07	224.72	143.23	333.84	93.53
68	E21a_E23a	KnownJunction	0	78.56	100.28	92.92	287.25	194.54	291.23	83.98
69	ER22a	ExonRegion	0	67.86	138.04	68.60	224.45	182.74	300.19	108.40
70	E22a_E23a	KnownJunction	0	63.81	121.16	79.70	201.86	177.44	282.87	126.56
71	ER23a	ExonRegion	0	137.96	243.85	165.28	514.97	405.33	589.37	214.35
72	E23a_E24a	KnownJunction	0	140.20	210.20	134.75	461.25	243.21	493.38	206.53
73	ER24a	ExonRegion	0	116.48	202.09	123.69	427.74	300.06	487.48	186.59
74	E24a_E25a	KnownJunction	0	79.99	98.62	57.38	224.34	166.40	278.05	100.38
75	E24a_E26a	NovelJunction	0	30.68	46.32	38.56	76.29	78.15	94.44	28.03
76	E25_Aa	NovelBoundary	1	43.56	8.14	33.93	3.98	11.18	10.18	7.47
77	ER25a	ExonRegion	0	120.59	106.25	82.68	239.98	150.89	332.74	117.90
78	E25a_E26a	KnownJunction	0	123.10	106.61	87.47	214.78	160.26	354.69	109.59
79	ER26a	ExonRegion	0	86.96	58.44	81.37	114.51	106.80	215.32	59.64
80	E26_Da	KnownBoundary	1	10.93	7.36	8.94	18.45	12.86	63.27	5.12
81	ER26b	ExonRegion	0	3.20	2.18	2.46	4.55	2.61	19.30	1.36