Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DDX51	Gene	0	40.62	64.42	70.94	126.93	62.08	44.34	37.69
2	329073	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	397333	Transcript	0	37.43	67.83	66.30	161.15	63.10	51.51	36.66
4	ER1a	ExonRegion	0	0.55	9.20	0.57	9.89	0.91	7.38	0.41
5	E1a_E2a	KnownJunction	0	4.02	33.76	3.91	36.63	7.33	21.36	2.34
6	ER2a	ExonRegion	0	11.72	40.27	15.41	51.44	13.99	28.85	9.98
7	E2a_E3a	KnownJunction	0	24.22	79.47	30.05	103.27	45.28	44.41	31.07
8	ER3a	ExonRegion	0	54.49	131.50	95.73	221.30	78.88	76.10	60.57
9	E3a_E4a	KnownJunction	0	70.68	145.75	111.74	235.72	125.73	67.05	59.95
10	E4_Aa	NovelBoundary	1	36.90	8.12	59.46	9.05	3.02	11.36	3.47
11	ER4a	ExonRegion	0	89.36	143.16	145.06	274.30	97.15	90.25	84.22
12	E4a_E5a	KnownJunction	0	72.88	150.72	147.99	277.95	113.03	91.28	84.24
13	ER5a	ExonRegion	0	76.93	131.19	130.05	249.84	98.86	91.66	73.35
14	E5a_E6a	KnownJunction	0	65.37	127.42	103.60	207.71	113.33	86.05	55.59
15	E6_Aa	NovelBoundary	1	31.68	9.54	62.35	11.59	2.26	6.16	10.45
16	ER6a	ExonRegion	0	40.59	124.09	104.97	184.13	84.28	57.35	54.74
17	E6_Da	NovelBoundary	0	8.65	28.53	24.20	28.69	12.13	21.12	5.62
18	E6a_E7a	KnownJunction	0	31.58	111.36	88.31	163.17	56.53	44.22	50.82
19	E6a_E8a	NovelJunction	0	0.00	1.08	1.55	8.48	0.97	3.27	1.39
20	I6	Intron	0	5.82	18.20	16.99	21.37	6.39	16.81	6.92
21	I6_AR1	ActiveIntronRegion	0	5.86	18.35	17.11	21.53	6.44	16.95	6.98
22	E7_Aa	NovelBoundary	0	16.69	26.56	40.50	49.90	4.17	39.21	18.33
23	ER7a	ExonRegion	0	27.71	92.32	72.65	150.31	47.40	58.15	46.06
24	E7a_E8a	KnownJunction	1	21.95	78.05	83.07	124.46	30.94	42.85	45.79
25	ER8a	ExonRegion	0	21.68	74.13	58.94	122.09	50.23	53.84	34.47
26	E8_Da	NovelBoundary	0	14.54	2.78	25.44	0.00	5.16	1.50	8.64
27	E8a_E9a	KnownJunction	0	18.99	77.16	47.64	133.64	43.27	47.52	36.00
28	I8_AR1	ActiveIntronRegion	0	10.70	4.42	18.58	3.96	6.24	0.48	4.38
29	I8_AR2	ActiveIntronRegion	0	13.83	6.68	24.53	2.58	7.46	2.45	7.57
30	I8_AR3	ActiveIntronRegion	0	9.62	3.69	19.46	3.27	5.05	2.92	7.82
31	ER9a	ExonRegion	0	41.11	87.86	83.03	134.41	51.89	50.36	43.11
32	E9a_E10a	KnownJunction	0	51.49	100.12	82.87	171.68	66.90	45.24	46.78
33	ER10a	ExonRegion	0	47.29	98.96	84.00	145.74	71.01	55.96	46.65
34	E10a_E11a	KnownJunction	0	48.18	73.01	74.57	150.08	64.25	42.21	48.02
35	ER11a	ExonRegion	0	44.96	84.61	81.83	158.73	74.13	38.96	50.88
36	E11a_E12a	KnownJunction	0	33.20	84.09	71.71	159.49	89.24	47.54	48.94
37	ER12a	ExonRegion	0	50.11	96.43	71.92	170.69	79.60	46.13	59.79
38	E12a_E13a	KnownJunction	0	48.02	82.62	67.47	170.67	65.72	45.29	53.56
39	ER13a	ExonRegion	0	38.23	92.04	70.78	173.11	78.45	56.51	45.16
40	E13a_E14a	KnownJunction	0	33.28	93.79	73.78	178.58	74.74	58.42	36.72
41	ER14a	ExonRegion	0	27.79	81.30	61.48	183.68	64.16	51.01	36.85
42	E14a_E16a	KnownJunction	0	29.49	82.23	56.85	201.12	56.78	60.84	36.24
43	ER15a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER16a	ExonRegion	0	45.36	53.42	75.75	121.18	69.41	42.18	37.08
45	IG18_AR2	ActiveIntergenicRegion	0	15.49	6.83	15.57	7.50	24.76	17.87	14.32
46	IG18_SR1	SilentIntergenicRegion	0	13.59	4.11	7.42	2.80	12.15	4.82	7.89
47	IG18_AR1	ActiveIntergenicRegion	0	10.71	3.15	11.77	3.06	9.73	2.36	8.25