Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ARL6IP4	Gene	0	89.42	165.92	92.59	146.16	141.87	119.59	233.90
2	392435	Transcript	0	74.17	134.14	82.56	132.23	75.18	101.92	182.30
3	315580	Transcript	0	162.59	219.20	155.49	228.22	197.63	157.49	375.14
4	392433	Transcript	0	5.08	11.02	4.34	7.05	6.43	6.20	5.57
5	357866	Transcript	0	5.92	35.72	10.26	39.26	1.06	19.90	7.05
6	IG5	Intergenic	0	0.74	0.63	0.52	0.00	7.62	0.00	1.23
7	IG5_AR1	ActiveIntergenicRegion	0	0.74	0.63	0.53	0.00	7.66	0.00	1.23
8	ER1a	ExonRegion	0	1.98	6.40	3.05	8.02	5.77	5.94	5.85
9	E1_Da	NovelBoundary	0	47.37	43.98	48.53	39.34	45.55	23.45	64.41
10	E1a_E2b	KnownJunction	0	70.98	118.64	89.18	154.34	107.89	98.86	242.87
11	ER2a	ExonRegion	0	1.90	5.21	2.16	4.31	1.99	2.64	2.98
12	E2_Ab	KnownBoundary	0	2.74	2.86	2.57	3.28	2.97	0.00	4.64
13	E2_Ac	KnownBoundary	0	34.77	88.90	28.22	92.84	10.28	61.99	67.89
14	ER2b	ExonRegion	0	38.42	103.04	46.62	122.32	67.22	71.33	88.62
15	ER2c	ExonRegion	0	61.90	178.31	66.70	161.66	93.03	130.74	158.63
16	E2_Da	KnownBoundary	0	43.79	130.54	58.00	126.95	72.22	104.06	114.01
17	E2a_E2d	NovelJunction	0	11.13	10.30	15.43	9.70	9.57	2.81	54.72
18	E2a_E2e	KnownJunction	0	74.17	134.14	82.56	132.23	75.18	101.92	182.30
19	ER2d	ExonRegion	0	46.67	91.70	51.87	93.52	38.90	79.32	106.61
20	E2_Db	KnownBoundary	0	8.90	17.97	10.04	6.12	6.62	10.21	5.90
21	E2b_E2d	KnownJunction	0	31.49	14.58	28.53	25.25	8.90	23.93	88.51
22	E2b_E2e	NovelJunction	0	80.23	193.33	97.16	189.53	98.74	133.19	155.58
23	E2b_E2f	KnownJunction	1	0.60	6.67	9.90	26.87	2.12	5.65	1.36
24	ER2e	ExonRegion	0	8.27	16.83	6.52	9.80	10.87	9.75	8.16
25	E2_Ad	KnownBoundary	0	7.89	12.22	4.22	5.77	6.43	5.57	6.56
26	E2_Ae	KnownBoundary	0	47.48	35.41	48.31	24.06	30.73	32.13	142.21
27	ER2f	ExonRegion	0	54.82	44.34	52.78	37.77	28.34	40.76	140.34
28	ER2g	ExonRegion	0	166.03	296.45	209.87	258.65	295.91	230.83	507.49
29	E2_Af	KnownBoundary	0	172.41	366.64	223.62	328.53	400.80	282.39	565.52
30	ER2h	ExonRegion	0	141.45	369.24	160.73	333.43	278.96	285.15	440.33
31	E2_Dc	KnownBoundary	0	14.07	62.55	19.17	57.68	35.52	56.49	33.78
32	E2c_E2g	KnownJunction	0	11.23	64.76	10.62	51.64	0.00	34.14	12.74
33	E2_Ag	KnownBoundary	0	26.60	96.89	33.24	82.57	277.21	59.52	77.95
34	ER2i	ExonRegion	0	110.65	308.57	126.13	274.33	403.47	221.66	318.00
35	ER2j	ExonRegion	0	187.20	400.36	216.48	355.14	682.43	292.84	555.36
36	E2_Dd	KnownBoundary	0	288.92	484.79	314.95	440.58	853.92	390.02	835.71
37	ER2k	ExonRegion	0	396.13	539.36	373.16	494.83	569.74	438.10	984.29
38	E2e_E3a	KnownJunction	0	414.54	563.21	393.91	489.73	469.96	480.36	1062.72
39	E3_Aa	NovelBoundary	1	124.64	21.94	134.48	8.61	4.61	13.35	7.40
40	ER3a	ExonRegion	0	350.48	679.41	395.65	535.63	399.42	473.53	1006.07
41	ER3b	ExonRegion	0	311.02	561.31	316.77	482.71	369.52	363.42	787.78
42	E3b_E4a	KnownJunction	0	432.25	554.91	375.51	523.16	418.96	434.45	1001.81
43	E3b_E4b	NovelJunction	0	0.00	4.73	0.53	8.32	0.00	4.40	1.63
44	ER3c	ExonRegion	0	402.76	575.76	362.45	512.50	403.04	416.68	980.41
45	E4_Aa	NovelBoundary	1	196.76	11.95	167.66	4.06	1.82	0.99	9.93
46	ER4a	ExonRegion	0	454.59	605.21	433.44	564.61	759.03	424.56	1091.78
47	E4_Da	KnownBoundary	0	20.73	36.12	30.47	17.61	27.85	8.36	33.02
48	E4a_E4b	KnownJunction	0	293.68	423.81	282.46	431.18	386.37	291.05	661.77
49	ER4b	ExonRegion	1	21.70	44.43	23.55	20.76	26.81	10.81	38.95
50	E4_Ab	KnownBoundary	0	17.07	37.52	9.50	17.61	18.81	9.73	15.75
51	ER4c	ExonRegion	0	112.09	235.90	110.73	212.01	180.24	161.85	283.68
52	ER4d	ExonRegion	0	1.63	7.59	4.66	5.14	8.40	5.36	6.66