Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C12orf48	Gene	0	5.97	0.33	2.43	0.58	145.36	4.05	8.44
2	358383	Transcript	0	0.52	0.00	0.00	0.00	34.49	0.83	0.76
3	378128	Transcript	0	5.39	0.00	2.05	0.00	46.29	0.00	0.00
4	327680	Transcript	0	4.91	1.02	0.86	0.63	130.68	4.40	6.36
5	392909	Transcript	0	1.16	0.09	3.81	0.09	78.49	4.23	6.48
6	392914	Transcript	0	102.63	55.21	83.09	39.63	3.13	46.70	29.23
7	392911	Transcript	0	0.00	0.00	0.00	0.00	0.01	0.00	0.00
8	ER1a	ExonRegion	0	0.00	0.00	0.34	0.00	11.31	0.00	0.93
9	E1_Ab	KnownBoundary	0	2.22	1.10	1.24	2.33	46.27	3.22	3.81
10	ER1b	ExonRegion	0	0.04	0.00	2.83	0.00	124.80	0.88	7.95
11	E1a_E2a	KnownJunction	0	0.00	0.00	3.46	0.00	93.59	3.59	8.56
12	ER2a	ExonRegion	0	0.71	0.00	4.02	0.00	57.25	6.67	8.46
13	E2a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E2a_E9a	KnownJunction	0	1.65	0.00	6.77	0.00	150.72	6.41	11.91
15	E2a_E10a	NovelJunction	0	1.60	0.00	0.89	0.00	13.16	0.00	0.00
16	E4_Aa	NovelBoundary	0	4129.69	2330.01	2636.25	1815.21	678.35	1641.57	1742.51
17	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER4a	ExonRegion	0	0.00	0.00	0.37	0.00	0.00	0.00	0.00
19	E4_Da	NovelBoundary	0	311.12	183.93	195.32	161.27	108.99	162.81	143.06
20	E4a_E7a	KnownJunction	0	513.13	276.06	414.38	198.14	15.38	233.51	146.15
21	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E7_Aa	NovelBoundary	0	290.07	130.49	237.11	137.60	172.41	125.37	89.06
24	ER7a	ExonRegion	0	0.00	0.00	0.68	0.00	0.27	0.00	0.00
25	E7_Da	NovelBoundary	0	3834.55	2671.70	2538.28	2157.72	1076.11	1973.62	1997.13
26	E7a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E8_Aa	NovelBoundary	0	92.63	55.46	70.37	58.30	34.33	49.77	49.62
28	ER8a	ExonRegion	0	7.85	0.85	2.31	1.67	19.31	0.00	2.34
29	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER9a	ExonRegion	0	2.82	0.00	4.92	0.22	218.97	6.08	12.30
31	E9_Da	KnownBoundary	0	3.91	0.00	2.05	1.16	221.51	8.92	12.70
32	ER9b	ExonRegion	0	9.43	1.52	4.46	2.15	181.16	7.23	18.23
33	E9_Db	KnownBoundary	0	0.73	0.00	0.00	0.00	7.58	2.73	1.18
34	E9b_E10a	KnownJunction	0	8.93	1.23	1.72	1.06	168.19	3.19	10.02
35	ER9c	ExonRegion	0	0.66	0.17	0.85	0.17	6.26	2.05	1.05
36	ER10a	ExonRegion	0	11.56	1.91	1.54	0.09	228.62	6.05	14.19
37	E10a_E11a	KnownJunction	0	10.10	0.00	0.63	0.00	249.36	2.60	16.60
38	E10a_E12a	NovelJunction	0	1.02	0.00	0.55	0.00	13.88	1.13	3.14
39	ER11a	ExonRegion	0	8.35	0.01	2.38	0.97	193.23	4.32	11.83
40	E11a_E12a	KnownJunction	0	5.74	0.00	4.45	1.35	216.30	1.05	9.16
41	ER12a	ExonRegion	0	10.46	0.00	2.88	0.87	233.12	4.35	10.43
42	E12a_E13a	KnownJunction	0	8.31	0.00	0.52	1.19	133.25	6.11	13.64
43	E12a_E15a	KnownJunction	0	1.03	0.00	0.00	0.00	67.89	1.66	1.52
44	E12a_E18a	KnownJunction	0	5.39	0.00	2.05	0.00	46.29	0.00	0.00
45	ER13a	ExonRegion	0	5.32	0.45	0.44	0.43	170.05	5.72	9.27
46	E13a_E14a	KnownJunction	0	12.27	1.02	1.74	0.00	219.79	4.15	15.85
47	ER14a	ExonRegion	0	9.16	0.56	0.84	0.00	165.30	2.96	12.68
48	E14a_E15a	KnownJunction	0	17.69	0.00	0.89	0.00	383.09	1.66	19.23
49	ER15a	ExonRegion	0	7.98	0.02	0.30	0.00	257.86	1.47	11.43
50	E15b_E17a	KnownJunction	0	3.64	0.00	0.00	0.00	132.55	3.56	4.24
51	E15b_E18a	NovelJunction	0	6.89	0.00	3.77	0.00	78.82	2.09	1.49
52	ER15b	ExonRegion	0	4.15	0.00	0.00	0.00	124.56	3.68	5.26
53	ER16a	ExonRegion	0	0.00	0.00	0.00	0.00	1.08	0.00	0.00
54	ER17a	ExonRegion	0	4.99	0.49	1.22	0.79	123.53	3.86	9.37
55	E17a_E18a	KnownJunction	0	6.11	2.57	1.35	1.11	135.94	5.79	5.46
56	ER18a	ExonRegion	0	7.62	0.25	3.43	0.72	195.59	4.86	9.57
57	ER19a	ExonRegion	0	0.00	0.00	0.00	0.00	0.04	0.00	0.00