Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CHST11	Gene	0	2.42	0.95	48.89	28.58	55.84	87.39	60.93
2	303694	Transcript	0	0.87	0.19	25.69	17.48	23.83	58.37	36.28
3	IG4	Intergenic	0	5.42	3.60	9.31	13.21	0.81	17.39	1.31
4	IG4_AR1	ActiveIntergenicRegion	0	17.67	5.91	15.81	9.55	1.45	15.56	1.40
5	IG4_SR1	SilentIntergenicRegion	0	62.27	24.57	60.61	44.07	7.21	61.89	6.76
6	IG4_SR2	SilentIntergenicRegion	0	36.90	21.08	51.39	42.29	8.52	56.42	4.40
7	IG4_AR2	ActiveIntergenicRegion	0	2.69	1.21	7.79	13.09	1.21	13.49	0.00
8	IG4_SR3	SilentIntergenicRegion	0	14.47	8.57	20.69	29.17	1.04	39.38	4.05
9	IG4_AR4	ActiveIntergenicRegion	0	3.27	5.05	7.75	23.09	0.70	29.82	0.93
10	IG4_SR5	SilentIntergenicRegion	0	3.30	2.46	6.62	9.81	0.72	12.65	0.69
11	IG4_AR6	ActiveIntergenicRegion	0	0.19	1.38	8.18	3.66	0.55	8.66	1.89
12	ER1a	ExonRegion	0	0.00	0.00	0.35	7.51	0.28	9.69	0.34
13	E1_Da	NovelBoundary	0	0.00	0.00	1.28	5.61	0.00	34.36	3.43
14	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	I1	Intron	0	0.64	0.00	2.61	4.12	2.19	19.40	5.01
16	I1_AR1	ActiveIntronRegion	0	0.65	0.00	2.63	4.17	2.21	19.55	5.06
17	E2_Aa	NovelBoundary	0	0.68	0.00	14.34	14.03	7.75	42.88	18.03
18	ER2a	ExonRegion	0	1.12	0.00	27.21	20.94	17.57	82.63	28.57
19	E2_Da	NovelBoundary	0	0.82	0.00	7.70	8.29	1.18	21.09	1.99
20	E2a_E3a	KnownJunction	0	0.00	0.00	18.28	20.54	12.01	51.99	35.97
21	I2_AR3	ActiveIntronRegion	0	0.53	0.53	6.16	9.33	2.71	9.18	5.31
22	ER3a	ExonRegion	0	0.88	0.00	35.89	22.89	29.65	80.76	52.71
23	E3a_E4a	KnownJunction	0	0.92	0.00	37.06	16.99	33.63	84.42	59.62
24	ER4a	ExonRegion	0	3.14	1.35	61.06	33.47	73.64	99.09	76.72
25	IG5	Intergenic	0	1.61	1.31	5.36	2.70	3.66	18.04	6.56
26	IG5_AR1	ActiveIntergenicRegion	0	0.93	0.09	19.85	6.69	20.17	22.32	40.05
27	IG5_AR2	ActiveIntergenicRegion	0	0.68	0.16	24.31	9.27	22.25	42.59	38.76
28	IG5_AR3	ActiveIntergenicRegion	0	14.44	10.56	15.85	11.07	3.66	104.06	4.21
29	IG5_SR4	SilentIntergenicRegion	0	8.38	2.83	6.39	5.52	1.31	25.51	2.02
30	IG5_AR4	ActiveIntergenicRegion	0	13.74	12.42	10.45	10.85	3.57	83.40	5.37