Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 KIF5A Gene 0 0.99 2.33 3.13 6.68 83.54 0.17 2.98 2 286452 Transcript 0 0.77 2.37 3.30 6.71 80.10 0.06 2.50 3 ER1a ExonRegion 0 0.00 0.57 4.15 4.08 97.58 0.05 0.97 4 E1a_E2a KnownJunction 0 0.00 0.00 4.99 6.94 118.58 0.00 1.72 5 ER2a ExonRegion 0 0.62 2.60 6.99 8.20 126.82 2.03 3.96 6 E2a_E3a KnownJunction 0 0.60 2.92 7.10 8.40 169.46 0.00 3.98 7 ER3a ExonRegion 0 0.78 1.95 6.75 4.43 142.81 0.00 3.62 8 E3a_E4a KnownJunction 0 1.57 3.02 7.44 2.95 124.12 0.00 3.70 9 ER4a ExonRegion 0 1.16 0.88 4.97 6.08 110.32 0.00 4.03 10 E4a_E5a KnownJunction 0 0.00 0.00 2.51 5.82 88.41 0.00 0.89 11 ER5a ExonRegion 0 0.58 2.68 2.65 5.85 88.79 0.00 1.27 12 E5a_E6a KnownJunction 0 1.03 4.54 1.58 5.85 97.67 0.00 1.53 13 ER6a ExonRegion 0 0.54 2.54 3.02 9.29 85.40 0.00 2.58 14 E6a_E7a KnownJunction 0 1.03 1.05 4.84 6.10 86.79 0.00 2.41 15 ER7a ExonRegion 0 0.58 1.96 3.53 7.11 77.69 0.00 3.27 16 E7a_E8a KnownJunction 0 2.07 2.73 2.44 8.26 84.24 0.00 3.35 17 ER8a ExonRegion 0 0.93 3.89 2.55 9.17 83.80 0.00 2.73 18 E8a_E9a KnownJunction 0 0.63 1.21 0.52 6.34 89.84 0.00 4.66 19 ER9a ExonRegion 0 1.24 3.18 2.66 6.51 98.79 0.00 1.69 20 E9a_E10a KnownJunction 0 0.68 3.63 3.41 6.10 82.83 0.00 2.88 21 ER10a ExonRegion 0 0.60 4.46 2.12 6.90 87.21 0.00 2.42 22 E10a_E11a KnownJunction 0 0.00 3.26 2.31 1.19 83.57 0.00 1.50 23 ER11a ExonRegion 0 0.41 1.21 1.33 5.55 50.34 0.00 3.16 24 E11a_E12a KnownJunction 0 0.60 0.97 2.31 4.39 40.50 0.00 3.83 25 ER12a ExonRegion 0 0.86 2.27 1.96 6.48 45.19 0.00 1.95 26 E12a_E13a KnownJunction 0 0.80 2.84 2.21 9.59 43.59 0.00 1.36 27 ER13a ExonRegion 0 0.72 1.62 1.82 5.15 55.93 0.00 0.89 28 E13a_E14a KnownJunction 0 0.80 2.55 0.65 3.77 62.47 0.00 1.38 29 ER14a ExonRegion 0 0.40 4.95 1.11 4.02 56.11 0.00 1.84 30 E14a_E15a KnownJunction 0 0.92 2.31 2.27 6.26 56.11 0.00 1.61 31 ER15a ExonRegion 0 0.14 0.26 1.17 7.58 58.36 1.23 1.69 32 E15a_E16a KnownJunction 0 0.00 0.00 0.00 10.78 34.97 0.00 2.22 33 ER16a ExonRegion 0 0.74 0.00 2.65 4.99 43.28 0.00 2.38 34 E16a_E17a KnownJunction 0 0.88 0.00 3.42 6.23 69.46 0.00 3.68 35 ER17a ExonRegion 0 1.00 0.78 3.91 5.85 48.58 0.00 1.30 36 E17a_E18a KnownJunction 0 3.15 0.00 3.64 9.13 50.23 0.00 2.92 37 ER18a ExonRegion 0 1.13 1.96 3.55 10.15 56.28 0.00 2.34 38 E18a_E19a KnownJunction 0 0.00 3.78 5.03 6.15 55.26 0.00 1.32 39 ER19a ExonRegion 0 1.47 2.28 2.28 6.43 59.29 0.00 1.82 40 E19a_E20a KnownJunction 0 1.30 2.44 3.43 12.19 58.16 0.00 2.54 41 ER20a ExonRegion 0 0.40 3.95 3.77 8.26 70.47 0.00 3.15 42 E20a_E21a KnownJunction 0 1.03 6.62 2.76 5.12 77.50 0.00 1.96 43 ER21a ExonRegion 0 0.87 5.18 2.13 6.44 75.34 0.00 1.84 44 E21a_E22a KnownJunction 0 1.00 5.02 3.05 4.20 71.60 0.00 1.53 45 ER22a ExonRegion 0 0.50 4.00 4.13 4.23 67.02 0.00 1.26 46 E22a_E23a KnownJunction 0 0.00 0.00 4.27 3.98 84.00 0.00 2.87 47 ER23a ExonRegion 0 0.26 3.30 4.67 9.48 99.28 0.00 3.75 48 E23a_E24a KnownJunction 0 1.03 7.57 7.76 13.41 147.54 0.00 2.22 49 ER24a ExonRegion 0 0.74 4.76 5.79 11.17 84.74 0.00 3.62 50 E24a_E25a KnownJunction 0 0.82 5.44 6.27 6.47 89.03 0.00 3.04 51 ER25a ExonRegion 0 0.93 2.44 3.70 6.58 95.28 0.00 2.61 52 E25a_E26a KnownJunction 0 0.92 0.00 3.41 10.78 76.81 0.00 3.97 53 ER26a ExonRegion 0 0.35 2.90 2.24 10.47 74.54 0.00 2.48 54 E26a_E27a KnownJunction 0 0.00 2.42 0.80 5.34 79.16 0.00 3.11 55 E27a_E28a KnownJunction 0 1.03 0.00 1.60 1.63 67.98 0.00 2.39 56 ER27a ExonRegion 0 0.77 1.30 1.81 3.74 77.89 0.00 1.28 57 ER28a ExonRegion 0 1.12 0.80 5.41 9.00 113.31 0.00 4.68 58 E28a_E29a KnownJunction 0 0.63 0.00 2.05 5.82 53.09 0.00 1.75 59 I28 Intron 0 0.47 2.05 1.04 3.14 23.24 0.19 0.98 60 I28_AR1 ActiveIntronRegion 0 0.59 2.58 1.12 3.55 26.23 0.22 1.15 61 I28_SR2 SilentIntronRegion 0 0.68 0.00 0.73 1.74 20.70 0.42 0.29 62 ER29a ExonRegion 0 1.38 2.14 2.95 6.37 92.07 0.23 3.62