Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AVIL	Gene	0	62.30	15.42	49.85	24.33	3.68	19.24	6.73
2	257861	Transcript	0	48.94	12.65	41.45	20.47	1.66	17.04	4.71
3	IG39	Intergenic	0	13.99	8.79	20.55	12.19	1.16	9.68	4.19
4	IG39_SR3	SilentIntergenicRegion	0	6.88	6.14	9.54	5.01	1.46	6.15	2.90
5	IG39_AR4	ActiveIntergenicRegion	0	10.37	9.11	15.84	10.16	0.94	8.13	3.62
6	IG39_SR2	SilentIntergenicRegion	0	17.94	9.19	28.14	18.22	1.48	13.19	4.60
7	IG39_AR3	ActiveIntergenicRegion	0	19.01	17.88	27.65	19.70	0.44	13.79	6.54
8	IG39_AR2	ActiveIntergenicRegion	0	21.90	9.12	29.07	13.89	1.50	11.33	5.39
9	IG39_AR1	ActiveIntergenicRegion	0	7.65	6.47	13.38	9.41	0.61	7.56	3.57
10	ER1a	ExonRegion	0	7.30	3.91	12.89	7.15	0.43	6.48	1.04
11	E1_Da	NovelBoundary	0	4.26	3.84	5.46	12.19	2.21	7.34	2.39
12	E1a_E2a	KnownJunction	0	3.34	4.12	11.64	3.06	0.00	1.34	3.34
13	E1a_E4a	NovelJunction	1	0.00	0.00	1.21	9.97	0.00	3.83	0.00
14	I1_AR1	ActiveIntronRegion	0	7.01	6.18	9.10	8.35	0.56	3.29	1.63
15	I1_AR2	ActiveIntronRegion	0	7.25	7.74	8.56	6.47	2.28	3.04	2.39
16	E2_Aa	NovelBoundary	0	10.28	2.68	8.58	8.80	6.75	7.40	0.69
17	ER2a	ExonRegion	0	8.24	3.89	14.70	4.44	2.16	8.89	4.59
18	E2_Da	NovelBoundary	0	4.07	1.63	11.57	9.27	1.98	4.37	2.45
19	E2a_E3a	KnownJunction	1	10.08	1.21	11.61	5.53	0.00	15.38	3.20
20	E3_Aa	NovelBoundary	0	3.66	7.86	8.02	5.39	4.54	1.66	2.55
21	ER3a	ExonRegion	0	12.90	9.52	27.28	14.32	2.89	13.32	5.66
22	E3_Da	NovelBoundary	0	4.87	5.44	7.70	12.49	4.38	2.57	4.77
23	E3a_E4a	KnownJunction	0	14.60	9.22	17.56	11.08	0.00	9.51	1.33
24	E4_Aa	NovelBoundary	1	8.80	10.80	9.67	9.97	2.33	0.00	5.46
25	ER4a	ExonRegion	0	17.17	13.83	24.58	25.71	2.57	15.06	3.40
26	E4a_E5a	KnownJunction	0	14.02	15.89	25.39	25.52	0.00	22.99	5.35
27	ER5a	ExonRegion	0	20.07	16.76	32.48	20.79	1.90	20.52	3.73
28	E5_Da	NovelBoundary	0	11.02	8.17	5.27	1.38	0.92	2.97	5.26
29	E5a_E6a	KnownJunction	0	24.12	16.68	22.55	9.43	0.00	18.71	0.00
30	ER6a	ExonRegion	0	25.65	14.57	29.67	22.46	1.99	17.74	5.46
31	E6a_E7a	KnownJunction	0	32.80	14.95	31.99	21.70	0.00	9.76	0.77
32	E6a_E9a	NovelJunction	0	2.49	2.81	7.80	11.00	0.00	10.34	0.00
33	E7_Aa	NovelBoundary	0	8.56	2.68	6.73	1.19	0.00	9.97	4.64
34	ER7a	ExonRegion	0	37.30	15.01	40.04	16.84	0.92	8.43	2.28
35	E7_Da	NovelBoundary	0	10.23	5.18	11.24	9.92	2.01	1.47	5.68
36	E7a_E8a	KnownJunction	0	46.75	16.81	38.76	22.16	0.95	7.77	3.98
37	E8_Aa	NovelBoundary	1	10.66	5.07	4.66	13.49	4.20	1.58	2.79
38	ER8a	ExonRegion	0	47.22	16.30	35.59	16.75	1.77	8.62	3.14
39	E8_Da	NovelBoundary	1	26.40	11.66	20.43	24.06	5.37	3.32	4.10
40	E8a_E9a	KnownJunction	1	43.94	12.45	37.52	8.86	0.00	1.37	2.35
41	I8	Intron	0	20.71	3.03	16.43	7.57	2.11	2.49	4.09
42	I8_AR1	ActiveIntronRegion	0	24.52	3.27	19.76	8.64	2.08	3.07	4.67
43	E9_Aa	NovelBoundary	1	5.37	5.67	13.59	15.58	2.12	8.17	3.54
44	ER9a	ExonRegion	0	51.62	15.38	52.34	20.87	1.07	19.02	8.17
45	E9a_E10a	KnownJunction	1	63.52	10.38	60.51	34.24	0.00	27.95	4.18
46	ER10a	ExonRegion	0	48.37	9.07	61.21	21.99	2.45	16.34	6.45
47	E10a_E11a	KnownJunction	0	23.70	9.72	42.42	11.81	0.00	5.95	4.83
48	E10a_E13a	NovelJunction	0	13.89	7.33	7.31	11.81	0.00	11.23	4.43
49	ER11a	ExonRegion	0	38.29	11.23	34.73	8.57	2.39	6.44	5.19
50	E11a_E12a	KnownJunction	0	23.15	8.96	23.21	4.09	0.00	7.66	0.00
51	E12_Aa	NovelBoundary	0	10.05	4.83	14.40	7.12	0.85	1.58	3.10
52	ER12a	ExonRegion	0	43.61	11.84	34.62	15.15	1.54	9.72	3.90
53	E12a_E13a	KnownJunction	0	48.87	13.27	37.98	19.59	0.00	18.63	1.59
54	E13_Aa	NovelBoundary	0	3.50	1.63	9.18	9.83	0.90	1.66	5.14
55	ER13a	ExonRegion	0	68.45	19.04	56.88	36.98	1.37	25.53	9.31
56	E13_Da	NovelBoundary	1	16.27	1.47	10.25	11.11	0.00	7.85	1.30
57	E13a_E14a	KnownJunction	1	40.21	10.17	39.96	24.44	0.00	29.88	3.43
58	E13a_E15a	NovelJunction	0	8.28	0.00	5.00	5.39	0.00	2.49	8.71
59	I13	Intron	0	16.31	6.07	12.72	9.44	3.15	1.96	3.36
60	I13_SR1	SilentIntronRegion	0	20.05	2.33	9.76	3.82	1.04	1.88	2.32
61	I13_AR3	ActiveIntronRegion	1	13.65	8.82	14.92	13.56	4.70	2.02	4.14
62	E14_Aa	NovelBoundary	0	15.82	5.96	11.93	16.04	8.97	4.66	7.24
63	ER14a	ExonRegion	0	40.91	14.16	46.28	30.61	5.65	20.36	5.41
64	E14_Da	NovelBoundary	1	33.35	6.59	20.49	19.99	7.26	5.57	6.46
65	E14a_E15a	KnownJunction	0	51.52	9.12	57.94	14.93	0.00	22.59	5.04
66	I14	Intron	1	12.95	7.66	12.43	9.32	7.75	0.71	4.66
67	I14_SR1	SilentIntronRegion	1	13.13	7.76	12.61	9.47	7.86	0.72	4.73
68	E15_Aa	NovelBoundary	1	51.14	15.58	38.30	16.58	26.16	3.08	9.79
69	ER15a	ExonRegion	0	56.56	30.10	60.18	27.39	4.84	18.64	9.57
70	E15_Da	NovelBoundary	0	16.31	6.07	20.18	6.75	8.88	0.00	8.14
71	E15a_E16a	KnownJunction	0	40.96	13.66	31.28	16.55	0.00	12.54	5.04
72	I15_SR2	SilentIntronRegion	0	9.62	0.53	10.94	2.71	7.81	2.14	2.36
73	E16_Aa	NovelBoundary	0	2.99	2.73	9.34	4.93	10.21	5.57	4.72
74	ER16a	ExonRegion	0	49.97	19.78	51.91	19.75	8.29	20.91	10.29
75	E16a_E17a	KnownJunction	1	40.12	1.39	38.05	13.71	0.00	19.24	5.26
76	ER17a	ExonRegion	1	69.94	6.37	56.83	28.57	2.30	21.59	5.29
77	E17_Da	NovelBoundary	1	8.51	6.52	15.18	16.42	7.33	1.26	5.02
78	E17a_E18a	KnownJunction	0	97.85	11.45	60.74	35.03	0.00	25.67	6.28
79	I17	Intron	0	15.47	5.35	12.27	7.10	2.50	4.37	2.84
80	I17_AR1	ActiveIntronRegion	0	18.20	6.10	14.11	7.73	2.30	6.00	3.38
81	E18_Aa	NovelBoundary	1	12.55	4.86	15.35	19.42	2.31	1.66	5.29
82	ER18a	ExonRegion	0	135.15	21.59	75.37	42.01	4.92	30.09	9.28
83	E18_Da	NovelBoundary	0	10.45	8.80	10.63	15.01	1.91	5.92	6.33
84	E18a_E19a	KnownJunction	1	220.54	16.42	93.85	53.10	2.35	48.24	5.00
85	I18_AR1	ActiveIntronRegion	0	6.36	2.02	5.53	2.26	7.86	0.52	1.10
86	E19_Aa	NovelBoundary	1	25.74	10.93	4.17	2.82	4.26	3.00	0.82
87	ER19a	ExonRegion	0	191.94	19.80	103.10	42.36	8.70	37.49	11.00
88	IG38	Intergenic	0	49.82	8.53	36.85	8.96	21.81	10.92	7.29
89	IG38_AR1	ActiveIntergenicRegion	0	49.91	8.55	36.92	8.98	21.86	10.93	7.31