Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DNAJC14	Gene	0	53.22	50.89	91.39	59.42	135.27	76.70	85.62
2	317287	Transcript	0	37.97	33.23	74.77	61.06	0.00	41.46	54.75
3	317269	Transcript	0	43.63	50.29	84.38	51.72	180.44	62.75	76.76
4	357606	Transcript	0	0	0	0	0	0	0	0
5	ER1a	ExonRegion	0	9.88	9.00	8.62	8.46	44.74	13.49	12.17
6	E1a_E2a	KnownJunction	0	29.24	12.06	35.39	21.59	241.43	6.35	39.58
7	I1	Intron	1	1.53	1.82	2.39	4.35	0.45	24.81	1.34
8	I1_SR2	SilentIntronRegion	1	1.65	1.90	2.57	4.67	0.48	26.57	1.44
9	E2_Aa	NovelBoundary	1	1.74	3.81	1.54	9.21	0.00	37.68	3.63
10	ER2a	ExonRegion	0	31.30	20.91	38.50	34.85	110.79	41.75	46.76
11	E2_Ab	KnownBoundary	1	31.53	27.95	32.39	48.66	31.74	88.31	50.85
12	ER2b	ExonRegion	0	46.20	57.56	79.45	64.74	110.62	97.76	77.80
13	E2_Da	KnownBoundary	0	57.53	29.53	100.12	58.87	170.89	61.72	93.30
14	ER2c	ExonRegion	0	59.56	52.27	90.37	58.86	135.03	69.86	81.47
15	E2_Db	NovelBoundary	0	12.75	13.87	10.36	6.45	3.00	18.84	16.50
16	E2b_E3a	KnownJunction	0	56.56	57.32	110.61	89.48	171.37	98.52	88.81
17	I2_SR2	SilentIntronRegion	1	12.39	9.78	15.36	6.65	10.02	23.49	16.91
18	E3_Aa	NovelBoundary	1	34.56	19.70	46.24	8.40	36.10	34.89	72.66
19	ER3a	ExonRegion	0	51.01	64.46	117.61	86.83	194.41	111.75	111.15
20	E3_Da	NovelBoundary	1	12.53	6.28	18.77	5.93	12.79	15.38	31.99
21	E3a_E4a	KnownJunction	0	39.79	72.40	114.29	86.29	224.86	91.25	94.27
22	I3	Intron	1	13.36	8.27	16.72	8.03	20.40	9.23	38.79
23	I3_AR1	ActiveIntronRegion	1	13.47	8.34	16.87	8.11	20.59	9.32	39.13
24	E4_Aa	NovelBoundary	1	14.67	14.82	15.25	12.49	21.90	14.71	36.53
25	ER4a	ExonRegion	0	65.53	69.45	136.33	97.57	252.95	100.86	142.85
26	E4_Da	NovelBoundary	1	10.00	16.55	21.94	15.44	46.52	15.09	42.51
27	E4a_E5a	KnownJunction	0	59.27	59.03	125.18	95.74	240.10	114.57	144.80
28	I4	Intron	1	19.65	14.77	31.53	10.39	28.23	7.73	43.58
29	I4_SR1	SilentIntronRegion	1	17.56	10.65	25.74	9.30	21.05	7.42	44.41
30	I4_AR1	ActiveIntronRegion	1	21.13	17.49	35.44	11.16	32.96	8.00	43.47
31	E5_Aa	NovelBoundary	1	13.95	23.54	32.97	15.60	24.92	10.13	42.46
32	ER5a	ExonRegion	0	80.89	84.13	166.01	104.75	253.22	115.08	169.92
33	E5_Da	NovelBoundary	1	19.24	28.50	42.19	10.59	49.91	29.37	59.99
34	E5a_E6a	KnownJunction	0	51.24	64.89	132.35	106.06	244.06	102.27	125.49
35	I5	Intron	1	6.85	7.64	13.84	1.94	14.92	2.86	19.06
36	I5_AR1	ActiveIntronRegion	1	6.98	7.79	14.08	1.96	15.20	2.91	19.39
37	E6_Aa	NovelBoundary	0	21.81	15.97	31.96	11.00	36.33	10.34	43.87
38	ER6a	ExonRegion	0	63.19	57.13	119.65	84.09	207.10	74.54	110.16
39	E6_Da	NovelBoundary	0	21.91	10.64	40.14	15.09	32.85	5.76	37.63
40	E6a_E7a	KnownJunction	0	50.32	34.34	78.74	48.38	126.49	44.78	59.78
41	I6	Intron	1	12.18	16.39	22.12	7.11	18.01	10.48	24.84
42	I6_SR1	SilentIntronRegion	1	12.98	17.36	23.41	7.36	19.11	10.77	26.40
43	E7_Aa	NovelBoundary	0	17.64	8.67	27.49	12.22	17.04	20.53	40.10
44	ER7a	ExonRegion	0	52.71	44.47	92.82	60.10	139.96	57.33	77.77
45	E7_Da	KnownBoundary	0	25.30	27.35	47.09	24.22	49.10	38.59	42.49
46	E7a_E7b	KnownJunction	0	37.97	33.23	74.77	61.06	0.00	41.46	54.75
47	E7_Ab	KnownBoundary	0	25.15	25.43	37.12	36.36	74.30	40.12	41.39
48	ER7b	ExonRegion	0	58.86	56.37	98.36	77.06	134.27	84.59	90.26
49	ER7c	ExonRegion	0	36.65	53.50	61.54	57.42	113.68	72.19	69.19
50	E7_Db	KnownBoundary	0	18.16	28.43	44.03	26.98	145.21	32.48	38.18
51	E7_Ad	KnownBoundary	0	23.47	36.52	56.12	28.42	224.97	33.93	51.94
52	ER7d	ExonRegion	0	27.51	50.30	69.91	42.65	224.17	50.51	67.59
53	ER7e	ExonRegion	0	29.20	52.24	73.83	41.15	228.38	50.27	66.78
54	ER7f	ExonRegion	0	32.02	51.75	76.23	40.82	244.74	50.59	68.99
55	ER7g	ExonRegion	0	68.73	52.15	129.79	66.08	150.74	87.30	125.35
56	E7_Dd	KnownBoundary	0	53.61	31.13	86.74	63.83	98.25	73.78	80.00
57	ER7h	ExonRegion	0	56.14	42.74	93.04	46.36	118.57	65.29	80.19