Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	DIP2B	Gene	0	135.93	113.00	140.42	191.98	88.31	55.69	124.53
2	301180	Transcript	0	114.08	125.17	122.03	196.38	69.78	47.32	124.63
3	ER1a	ExonRegion	0	11.69	45.34	11.45	61.02	4.42	13.78	12.62
4	E1a_E2a	KnownJunction	0	46.65	119.04	54.79	153.66	19.43	29.94	46.22
5	ER2a	ExonRegion	0	93.98	162.37	91.94	201.90	54.52	51.02	88.20
6	E2a_E3a	KnownJunction	0	132.03	191.83	120.65	244.80	47.24	67.59	106.14
7	E2a_E4a	NovelJunction	0	0.00	9.62	2.11	2.19	0.00	5.47	1.18
8	ER3a	ExonRegion	0	95.05	214.62	108.21	267.47	41.98	76.27	116.86
9	E3a_E4a	KnownJunction	0	120.27	216.87	112.12	246.61	49.33	80.91	123.65
10	E4_Aa	NovelBoundary	1	67.24	3.18	48.28	0.00	0.00	0.00	1.58
11	ER4a	ExonRegion	0	114.17	230.79	124.10	302.45	67.42	80.00	148.65
12	E4a_E5a	KnownJunction	0	67.64	249.29	109.90	307.92	69.76	76.75	148.26
13	E4a_E6a	NovelJunction	1	4.54	17.18	12.01	18.18	0.92	2.55	23.95
14	ER5a	ExonRegion	0	89.62	227.65	126.93	303.50	67.60	69.28	147.35
15	E5a_E6a	KnownJunction	0	125.81	225.72	180.13	318.27	54.04	83.48	178.02
16	ER6a	ExonRegion	0	151.34	195.67	175.06	266.91	63.45	63.81	142.41
17	E6a_E7a	KnownJunction	0	140.43	212.75	166.88	246.85	60.79	60.67	138.44
18	ER7a	ExonRegion	0	191.63	182.41	199.47	247.03	67.77	58.59	138.27
19	E7a_E8a	KnownJunction	0	184.34	147.41	178.15	234.07	66.65	51.13	118.81
20	ER8a	ExonRegion	0	113.74	107.26	118.20	174.40	40.07	35.24	98.20
21	E8a_E9a	KnownJunction	0	73.14	122.58	107.96	150.19	46.82	37.41	112.34
22	ER9a	ExonRegion	0	67.11	102.26	95.89	146.15	47.77	32.25	116.18
23	E9a_E10a	KnownJunction	0	77.37	100.36	97.96	139.14	53.94	31.52	102.56
24	ER10a	ExonRegion	0	70.72	100.76	108.50	166.86	49.52	27.31	110.43
25	E10a_E11a	KnownJunction	1	66.98	118.77	104.70	169.32	37.05	23.69	94.79
26	ER11a	ExonRegion	0	85.84	119.69	108.67	186.84	52.14	42.69	113.01
27	E11a_E12a	KnownJunction	0	112.54	120.38	118.21	171.65	74.00	47.38	111.41
28	ER12a	ExonRegion	0	95.07	119.44	109.37	156.22	56.27	37.47	104.12
29	E12a_E13a	KnownJunction	0	87.81	93.05	94.74	145.10	49.70	27.44	79.25
30	E12a_E15a	NovelJunction	0	7.86	8.51	12.17	16.61	2.17	2.89	2.94
31	ER13a	ExonRegion	0	93.17	92.61	107.96	165.06	53.88	26.57	114.64
32	E13a_E14a	KnownJunction	0	55.73	49.05	76.45	109.29	53.97	14.50	104.89
33	E13a_E15a	NovelJunction	0	1.77	18.92	9.14	33.11	1.11	4.42	0.00
34	ER14a	ExonRegion	0	76.02	68.85	94.41	117.12	63.32	20.13	111.81
35	E14a_E15a	KnownJunction	0	78.59	86.17	106.83	120.66	92.30	26.85	106.01
36	ER15a	ExonRegion	0	79.57	88.79	105.92	167.41	59.16	30.51	113.35
37	E15a_E16a	KnownJunction	0	72.58	101.59	83.00	196.33	38.77	44.41	111.36
38	ER16a	ExonRegion	0	68.95	100.07	83.33	169.84	46.69	34.46	101.19
39	E16a_E17a	KnownJunction	0	69.90	101.20	82.51	142.91	48.36	23.99	93.03
40	ER17a	ExonRegion	0	59.49	98.87	79.63	142.14	51.85	28.05	95.65
41	E17a_E18a	KnownJunction	0	57.16	67.96	58.95	138.98	35.85	26.24	86.29
42	ER18a	ExonRegion	0	81.95	98.22	85.80	162.59	46.17	30.66	104.35
43	E18a_E19a	KnownJunction	0	82.48	116.83	92.47	188.77	71.88	39.37	113.05
44	ER19a	ExonRegion	0	99.48	95.64	116.19	184.10	60.43	39.02	110.30
45	E19a_E20a	KnownJunction	0	114.74	99.78	129.76	177.61	57.93	30.36	107.01
46	ER20a	ExonRegion	0	138.47	101.70	148.99	184.21	66.68	39.07	111.37
47	E20a_E21a	KnownJunction	0	148.77	78.63	142.37	142.39	46.50	28.89	111.28
48	ER21a	ExonRegion	0	168.40	120.89	177.43	201.99	89.93	46.51	150.72
49	E21a_E22a	KnownJunction	0	192.22	117.38	209.49	213.45	111.74	56.47	146.28
50	ER22a	ExonRegion	0	180.65	112.50	190.17	223.09	97.14	57.92	172.60
51	E22a_E23a	KnownJunction	0	129.03	115.54	150.64	215.05	100.65	68.82	150.15
52	ER23a	ExonRegion	0	134.08	110.84	148.95	191.09	87.14	46.84	141.36
53	E23a_E24a	KnownJunction	0	161.74	93.08	124.39	159.49	85.39	36.37	114.91
54	ER24a	ExonRegion	0	209.29	136.73	165.36	237.56	102.85	45.33	153.45
55	E24a_E25a	KnownJunction	0	222.71	163.36	191.57	264.44	127.09	59.23	162.80
56	ER25a	ExonRegion	0	210.43	134.35	178.03	249.50	116.56	56.00	187.49
57	E25a_E26a	KnownJunction	0	191.45	140.68	160.16	235.88	91.36	65.87	197.54
58	ER26a	ExonRegion	0	171.42	161.52	155.97	246.08	99.06	63.96	182.83
59	E26a_E27a	KnownJunction	0	119.73	139.13	115.88	214.67	113.17	60.25	155.74
60	ER27a	ExonRegion	0	151.63	138.16	145.52	219.46	107.62	56.29	169.50
61	E27a_E28a	KnownJunction	0	128.00	120.19	133.26	236.83	88.82	42.50	140.46
62	ER28a	ExonRegion	0	124.09	147.03	127.51	240.30	97.08	66.53	147.93
63	E28a_E29a	KnownJunction	0	251.97	181.06	192.39	253.27	135.74	73.46	180.23
64	ER29a	ExonRegion	0	172.06	183.00	170.39	272.09	104.29	67.99	190.36
65	E29a_E30a	KnownJunction	0	125.24	154.21	141.02	238.92	88.27	64.32	180.35
66	ER30a	ExonRegion	0	146.68	131.57	119.85	238.44	88.43	52.75	143.25
67	E30a_E31a	KnownJunction	0	106.06	143.34	107.75	206.08	96.43	71.77	146.52
68	E31_Aa	NovelBoundary	1	45.81	5.99	53.06	3.36	2.17	3.22	7.57
69	ER31a	ExonRegion	0	161.01	149.00	147.66	220.81	84.73	72.41	164.84
70	E31a_E32a	KnownJunction	0	119.58	130.39	111.18	184.25	80.29	48.32	115.50
71	ER32a	ExonRegion	0	105.02	99.69	109.60	163.31	62.75	47.76	108.61
72	E32a_E33a	KnownJunction	0	75.34	84.15	104.40	159.32	58.78	34.28	98.03
73	ER33a	ExonRegion	0	73.79	79.26	92.36	151.73	52.54	41.07	104.54
74	E33a_E34a	KnownJunction	0	64.84	61.16	76.06	136.13	51.32	36.77	97.02
75	ER34a	ExonRegion	0	66.72	78.21	91.53	141.59	51.73	34.43	99.25
76	E34a_E35a	KnownJunction	0	58.93	86.46	90.68	144.80	45.60	37.55	78.79
77	ER35a	ExonRegion	0	81.02	87.49	108.01	163.78	56.94	44.54	105.20
78	E35a_E36a	KnownJunction	0	77.57	102.12	89.44	170.65	67.13	37.57	124.04
79	ER36a	ExonRegion	0	89.76	112.61	106.62	199.63	62.51	47.20	121.96
80	E36a_E37a	KnownJunction	0	102.18	100.36	98.25	184.41	65.03	54.40	115.02
81	ER37a	ExonRegion	0	101.82	98.10	104.68	216.18	97.05	49.02	140.67
82	E37a_E38a	KnownJunction	0	127.06	104.82	135.20	232.93	119.53	50.73	143.16
83	ER38a	ExonRegion	0	162.18	96.86	162.28	183.36	113.13	65.18	124.26
84	IG29_AR2	ActiveIntergenicRegion	0	1.42	3.99	3.83	9.43	0.99	6.86	0.67