Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C1S	Gene	0	436.53	20.60	385.13	101.24	19.72	939.80	5.47
2	406697	Transcript	0	3.21	2.06	9.03	3.51	5.96	8.06	1.82
3	360817	Transcript	1	14.40	2.84	14.32	11.05	0.80	83.63	0.05
4	382222	Transcript	0	26.42	1.62	24.35	5.46	1.43	54.10	0.34
5	328916	Transcript	0	0	0	0	0	0	0	0
6	403949	Transcript	0	2.01	1.28	5.67	3.63	0.84	10.23	0.77
7	402681	Transcript	0	184.16	18.18	207.61	63.45	0.00	903.69	1.65
8	ER1a	ExonRegion	0	1.77	8.23	15.19	11.03	17.35	6.06	7.94
9	E1_Da	NovelBoundary	0	7.58	4.31	7.92	6.99	18.26	10.13	9.89
10	E1a_E2a	KnownJunction	0	1.45	0.00	5.72	0.00	5.44	2.14	2.34
11	ER2a	ExonRegion	0	2.52	2.35	9.12	4.81	14.21	7.58	2.84
12	E2_Da	NovelBoundary	0	7.51	2.78	2.80	2.60	21.21	4.53	7.09
13	E2a_E3a	KnownJunction	0	0.00	0.00	0.75	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	0	1.67	1.88	11.10	3.34	1.75	3.04	0.61
15	E3a_E4a	KnownJunction	0	0.72	3.94	4.89	3.36	5.16	1.61	0.00
16	E4_Aa	NovelBoundary	1	10.43	13.50	8.32	5.12	1.08	1.26	7.34
17	ER4a	ExonRegion	0	1.78	2.13	11.33	3.05	4.98	2.37	0.65
18	E4a_E6c	KnownJunction	0	0.00	0.00	3.12	1.06	2.03	3.16	0.00
19	ER5a	ExonRegion	0	2.65	0.00	1.59	1.41	0.51	5.61	0.11
20	E5_Ab	KnownBoundary	0	6.04	0.00	3.75	2.79	1.15	13.56	0.00
21	ER5b	ExonRegion	0	188.16	10.07	168.78	62.39	9.64	576.99	4.94
22	E5a_E6b	KnownJunction	0	40.37	6.12	42.41	42.29	2.03	444.29	0.00
23	E5a_E6c	KnownJunction	0	26.15	5.67	27.06	20.70	1.08	161.66	0.00
24	ER6a	ExonRegion	0	2.01	1.28	5.67	3.63	0.84	10.23	0.77
25	E6_Ab	KnownBoundary	0	22.95	0.00	22.81	5.74	1.18	14.47	1.45
26	ER6b	ExonRegion	0	201.27	16.92	165.03	89.01	7.65	870.23	5.20
27	E6_Ac	KnownBoundary	0	284.65	15.00	210.76	58.38	8.94	694.86	5.69
28	E6_Ad	KnownBoundary	0	214.17	23.38	244.07	75.72	6.32	826.75	2.38
29	ER6c	ExonRegion	0	344.48	27.94	325.76	104.98	11.99	1141.05	5.91
30	ER6d	ExonRegion	0	359.56	30.18	378.30	114.50	18.61	1262.67	4.05
31	E6a_E7a	KnownJunction	0	428.56	26.64	467.64	118.90	24.37	1370.57	5.75
32	E6a_E8a	NovelJunction	0	0.00	7.78	0.55	2.93	0.00	17.07	0.89
33	ER7a	ExonRegion	0	389.11	33.87	487.03	139.47	25.17	1523.18	5.43
34	E7_Da	KnownBoundary	0	148.24	19.60	207.75	62.53	7.52	707.89	2.98
35	E7a_E7b	KnownJunction	0	184.16	18.18	207.61	63.45	0.00	903.69	1.65
36	E7_Ab	KnownBoundary	0	193.12	17.23	194.39	71.52	8.58	875.01	2.12
37	ER7b	ExonRegion	0	368.08	37.66	449.33	152.13	18.49	1778.51	5.40
38	ER7c	ExonRegion	0	483.91	28.02	539.89	147.45	23.65	1545.76	7.39
39	E7b_E8a	KnownJunction	0	511.13	23.07	573.10	132.42	38.36	1342.13	8.20
40	ER8a	ExonRegion	0	590.65	33.31	713.00	143.38	28.11	1386.40	9.83
41	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	E8a_E11a	KnownJunction	0	537.37	34.39	578.55	99.29	20.89	986.69	9.87
43	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	I9_AR1	ActiveIntronRegion	1	68.15	3.99	73.30	20.30	2.49	62.98	1.03
46	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	E10a_E11b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	E11_Ab	NovelBoundary	0	576.25	53.44	750.10	143.94	15.91	1305.09	10.20
49	ER11a	ExonRegion	0	580.66	47.94	724.80	128.48	20.85	1256.69	11.59
50	ER11b	ExonRegion	0	667.66	42.93	702.23	132.22	35.14	1216.08	6.44
51	E11b_E12a	KnownJunction	0	943.90	29.77	717.35	111.34	37.05	962.25	6.25
52	ER11c	ExonRegion	0	912.52	32.09	695.62	122.41	30.71	958.12	4.67
53	ER12a	ExonRegion	0	979.56	29.85	716.40	133.84	28.11	1065.56	9.13
54	E12_Da	KnownBoundary	0	1144.01	23.88	795.70	147.35	30.20	1294.64	10.81
55	E12a_E13a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
56	ER12b	ExonRegion	0	1365.22	26.86	839.31	150.53	38.62	1213.07	7.16
57	E12b_E14a	KnownJunction	0	1392.54	30.03	870.18	143.80	49.40	1204.62	5.46
58	ER13a	ExonRegion	0	0.00	0.00	1.53	0.00	2.63	0.00	0.00
59	E13_Da	NovelBoundary	1	79.29	53.28	80.01	90.81	0.00	34.87	80.40
60	E13a_E14b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
61	E14_Ab	NovelBoundary	0	525.10	0.00	352.59	1.25	0.00	9.27	0.00
62	ER14a	ExonRegion	0	1351.99	28.67	868.27	140.66	45.19	1216.68	7.29
63	ER14b	ExonRegion	0	1276.79	26.87	891.92	153.89	42.89	1356.45	9.53
64	E14a_E15a	KnownJunction	0	1137.55	24.67	863.79	161.41	38.18	1318.41	4.99
65	ER15a	ExonRegion	0	1017.03	31.96	842.05	183.05	49.29	1402.47	7.43
66	E15_Da	NovelBoundary	0	1006.70	33.94	773.27	155.20	37.78	1249.27	5.95
67	E15b_E16a	KnownJunction	0	1004.35	33.08	754.03	151.47	33.61	1161.34	9.97
68	ER15b	ExonRegion	0	1065.05	36.80	817.66	168.13	39.99	1312.53	9.39
69	ER16a	ExonRegion	0	962.08	39.83	770.56	164.88	38.46	1353.72	7.49
70	E16a_E17a	KnownJunction	0	880.38	45.42	757.99	175.58	43.89	1476.18	5.55
71	ER17a	ExonRegion	0	774.91	38.09	720.32	162.84	34.33	1445.16	9.01
72	E17a_E18a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
73	E17a_E19b	KnownJunction	0	647.32	34.42	581.90	143.12	29.81	1314.26	8.93
74	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
75	ER18a	ExonRegion	0	0.05	0.00	0.08	0.00	0.00	0.00	0.00
76	ER19a	ExonRegion	0	316.98	19.44	290.60	65.47	14.58	649.17	4.05
77	ER19b	ExonRegion	0	576.70	28.89	506.64	112.90	23.12	1095.13	9.42
78	E19a_E20a	KnownJunction	0	521.71	18.94	492.49	78.16	29.69	929.95	8.36
79	ER20a	ExonRegion	0	516.28	27.77	461.03	157.94	23.39	1514.19	6.54
80	E20_Da	KnownBoundary	0	114.74	5.99	101.71	42.24	1.84	566.06	2.09
81	ER20b	ExonRegion	0	86.79	3.31	95.13	25.33	5.27	370.12	2.00
82	ER20c	ExonRegion	0	18.95	0.00	20.10	4.99	2.70	46.59	2.02
83	IG45_AR4	ActiveIntergenicRegion	0	39.58	6.53	101.46	32.02	3.04	173.13	2.15