Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CLSTN3	Gene	0	100.95	71.23	125.59	211.85	58.80	509.68	54.85
2	266546	Transcript	0	143.87	99.07	181.20	295.02	89.25	696.11	79.48
3	331148	Transcript	0	1.54	1.07	1.78	1.99	0.32	2.63	0.30
4	IG48	Intergenic	0	79.34	15.86	83.26	30.65	4.03	57.43	20.52
5	IG48_AR1	ActiveIntergenicRegion	0	29.80	6.75	37.27	7.46	1.52	15.79	9.17
6	IG48_SR1	SilentIntergenicRegion	0	65.08	16.81	76.50	34.90	4.76	51.09	19.05
7	IG48_AR2	ActiveIntergenicRegion	0	122.70	15.11	131.93	25.98	5.13	68.35	25.27
8	IG48_SR2	SilentIntergenicRegion	0	180.41	22.80	189.25	50.55	10.96	88.46	27.14
9	IG48_AR3	ActiveIntergenicRegion	0	114.84	21.56	113.10	41.30	4.69	78.57	26.45
10	IG48_AR4	ActiveIntergenicRegion	0	29.97	8.60	32.12	16.30	2.20	38.18	14.85
11	ER1a	ExonRegion	0	74.40	48.46	71.45	121.70	43.26	344.31	22.23
12	E1a_E2a	KnownJunction	0	46.55	51.02	63.57	163.98	33.63	449.16	27.24
13	E1a_E4a	NovelJunction	0	0.58	1.52	0.00	9.83	0.00	11.20	0.00
14	I1	Intron	0	28.46	5.34	30.15	9.87	3.11	13.55	9.99
15	I1_SR4	SilentIntronRegion	0	31.15	4.59	22.02	8.91	2.99	6.33	8.02
16	I1_SR5	SilentIntronRegion	0	35.17	5.26	35.89	6.63	3.59	13.37	9.86
17	I1_AR5	ActiveIntronRegion	0	34.84	7.64	46.25	16.62	3.95	24.99	15.21
18	E2_Aa	NovelBoundary	0	28.01	6.49	31.47	29.39	7.12	45.51	11.68
19	ER2a	ExonRegion	0	92.79	70.42	120.30	233.37	37.53	605.44	58.14
20	E2a_E3a	KnownJunction	0	92.21	74.93	123.60	207.25	25.27	529.19	51.39
21	E2a_E4a	NovelJunction	1	11.38	8.46	15.30	26.39	1.75	24.15	4.90
22	ER3a	ExonRegion	0	79.79	83.17	107.92	211.69	53.79	549.01	52.21
23	E3a_E4a	KnownJunction	0	61.72	71.25	82.26	210.44	68.67	606.37	57.91
24	I3	Intron	0	48.64	6.61	41.24	21.14	1.61	28.56	6.28
25	I3_AR2	ActiveIntronRegion	0	54.76	7.18	45.89	23.43	1.58	31.57	6.98
26	ER4a	ExonRegion	0	124.06	108.37	168.08	328.12	77.78	740.87	83.71
27	E4a_E5a	KnownJunction	0	155.18	108.37	185.64	363.86	77.94	776.71	97.88
28	E4a_E6a	NovelJunction	0	0.63	4.49	6.12	9.18	0.00	12.92	3.83
29	ER5a	ExonRegion	0	160.42	108.50	221.93	328.62	94.86	730.21	82.05
30	E5a_E6a	KnownJunction	0	150.86	124.11	217.55	302.28	86.08	810.59	73.29
31	ER6a	ExonRegion	0	145.05	97.02	193.99	297.91	86.19	691.07	77.14
32	E6a_E7a	KnownJunction	0	150.21	96.31	188.71	240.65	91.73	587.29	67.50
33	ER7a	ExonRegion	0	171.12	116.39	205.66	310.98	96.05	701.27	98.17
34	E7_Da	NovelBoundary	0	28.62	14.76	45.14	42.45	3.20	15.65	12.27
35	E7a_E8a	KnownJunction	0	165.33	128.78	186.31	318.18	108.67	780.81	94.80
36	E7a_E9a	NovelJunction	0	5.56	6.20	2.51	7.80	0.00	40.44	7.52
37	I7	Intron	0	14.71	4.81	27.96	20.08	2.39	18.86	5.95
38	I7_AR1	ActiveIntronRegion	0	19.82	6.92	37.85	22.26	2.80	23.99	8.47
39	ER8a	ExonRegion	0	129.74	115.65	173.20	316.73	94.95	736.16	92.35
40	E8a_E9a	KnownJunction	0	163.56	72.04	201.40	280.23	98.37	724.05	90.17
41	ER9a	ExonRegion	0	148.85	115.66	186.26	357.17	91.10	783.52	113.56
42	E9a_E10a	KnownJunction	0	166.57	104.72	174.31	348.34	69.92	750.39	92.37
43	E9a_E11a	NovelJunction	1	1.03	7.54	0.75	7.78	0.99	26.96	0.00
44	ER10a	ExonRegion	0	200.35	104.23	253.33	364.67	131.00	785.52	104.76
45	E10a_E11a	KnownJunction	0	177.40	93.37	247.05	302.04	154.78	701.14	94.27
46	E10a_E13a	NovelJunction	1	0.00	1.55	1.83	2.87	1.18	13.83	10.40
47	ER11a	ExonRegion	0	181.39	103.37	223.02	302.72	103.34	720.49	78.55
48	E11a_E12a	KnownJunction	0	228.00	116.36	258.21	324.52	114.96	791.08	86.20
49	E11a_E13a	NovelJunction	1	1.69	0.00	10.78	9.78	1.06	24.76	4.18
50	ER12a	ExonRegion	0	200.37	92.12	219.60	318.23	125.02	645.67	82.16
51	E12a_E13a	KnownJunction	0	144.62	82.33	170.58	258.96	104.29	552.05	70.58
52	ER13a	ExonRegion	0	184.58	99.38	223.75	357.05	104.29	719.16	95.27
53	E13a_E14a	KnownJunction	0	158.30	120.30	212.78	344.08	123.82	726.01	104.63
54	ER14a	ExonRegion	0	165.51	110.95	226.88	335.31	110.77	727.55	94.61
55	E14a_E15a	KnownJunction	0	182.50	136.66	222.74	377.51	92.95	865.23	121.59
56	ER15a	ExonRegion	0	131.27	133.62	187.94	373.62	96.77	857.90	90.92
57	E15a_E16a	KnownJunction	0	209.68	137.74	253.52	391.36	144.24	999.07	108.62
58	ER16a	ExonRegion	0	141.89	113.81	176.89	317.25	91.87	793.51	84.27
59	E16a_E18a	KnownJunction	0	115.73	66.65	142.45	237.75	80.36	574.18	44.11
60	E16a_E19a	NovelJunction	0	0.72	3.23	3.87	15.93	2.31	54.14	4.39
61	ER17a	ExonRegion	0	5.77	2.39	6.55	7.16	1.27	10.42	1.20
62	E17a_E18a	KnownJunction	0	0.00	1.42	0.00	0.00	0.00	0.00	0.00
63	ER18a	ExonRegion	0	85.22	66.73	115.01	193.45	50.30	604.51	44.08
64	E18_Da	KnownBoundary	0	0.98	1.37	0.89	2.60	0.00	0.00	0.00
65	E18a_E19a	KnownJunction	0	47.88	63.34	88.59	188.96	30.94	616.56	30.08
66	ER18b	ExonRegion	0	0.41	0.46	0.55	0.79	0.03	0.11	0.00
67	E18b_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
68	ER19a	ExonRegion	0	50.34	38.13	56.50	115.86	19.71	347.90	24.67
69	IG49_AR7	ActiveIntergenicRegion	0	2.92	1.89	3.49	6.67	0.30	11.61	0.00
70	IG49_AR8	ActiveIntergenicRegion	0	1.14	4.93	5.52	13.34	4.78	13.23	2.42