Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SIDT2	Gene	0	51.55	50.85	50.03	112.37	49.23	52.94	128.21
2	278951	Transcript	0	1.76	2.97	1.54	5.80	0.70	4.62	2.21
3	324225	Transcript	0	55.44	66.28	52.64	111.83	49.75	39.82	119.65
4	392956	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	IG30	Intergenic	0	15.29	3.56	9.90	3.72	4.54	1.94	7.78
6	IG30_SR1	SilentIntergenicRegion	0	17.34	2.18	13.06	3.49	8.69	0.06	12.13
7	IG30_AR1	ActiveIntergenicRegion	0	29.83	4.97	23.03	6.23	12.74	1.23	19.69
8	IG30_SR2	SilentIntergenicRegion	0	29.97	7.13	16.28	5.89	14.05	1.46	12.59
9	IG30_AR2	ActiveIntergenicRegion	0	25.61	6.25	16.41	4.29	9.61	0.03	15.70
10	IG30_SR3	SilentIntergenicRegion	0	16.49	3.89	8.98	3.47	4.17	2.86	8.62
11	IG30_AR3	ActiveIntergenicRegion	0	20.02	3.32	11.82	4.91	3.89	0.53	8.23
12	IG30_AR4	ActiveIntergenicRegion	0	11.29	4.15	8.65	4.99	4.54	1.85	5.32
13	IG30_SR5	SilentIntergenicRegion	0	8.77	2.22	12.85	2.85	1.46	2.51	7.10
14	IG30_AR6	ActiveIntergenicRegion	0	10.23	0.70	12.77	3.72	2.40	4.05	6.15
15	ER1a	ExonRegion	0	4.80	9.40	4.77	24.15	2.09	13.20	9.40
16	E1_Ab	KnownBoundary	0	9.05	16.47	6.97	19.29	3.43	33.34	21.76
17	ER1b	ExonRegion	0	10.61	27.62	10.97	43.13	4.13	39.05	28.32
18	E1_Ac	KnownBoundary	0	11.03	32.34	13.39	57.03	4.03	30.36	32.00
19	ER1c	ExonRegion	0	18.84	43.69	21.07	85.09	19.97	52.31	55.58
20	E1_Da	KnownBoundary	0	34.88	45.92	38.56	115.65	52.15	72.12	105.26
21	E1a_E23a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER1d	ExonRegion	0	47.42	60.49	47.59	129.47	45.24	68.33	108.77
23	E1b_E2a	KnownJunction	0	43.11	61.58	40.57	133.88	38.82	61.85	107.56
24	E1b_E3a	NovelJunction	0	0.00	0.00	0.89	8.26	0.00	4.26	0.00
25	ER2a	ExonRegion	0	42.46	58.01	42.49	136.52	29.02	70.75	111.51
26	E2a_E3a	KnownJunction	0	63.86	68.75	61.52	177.80	38.71	83.51	146.32
27	ER3a	ExonRegion	0	51.63	57.14	55.07	142.65	61.55	58.29	150.27
28	E3a_E4a	KnownJunction	0	36.60	64.65	49.51	117.66	53.21	51.24	131.33
29	ER4a	ExonRegion	0	39.61	56.65	52.69	123.88	56.32	52.82	148.69
30	E4a_E5a	KnownJunction	0	32.11	39.07	39.23	97.45	50.49	44.11	126.59
31	ER5a	ExonRegion	0	38.44	68.87	46.77	136.27	49.30	61.86	166.15
32	E5a_E6a	KnownJunction	0	26.87	62.95	35.95	120.31	45.83	63.09	132.88
33	ER6a	ExonRegion	0	32.57	61.61	40.32	122.87	50.68	62.67	148.19
34	E6a_E7a	KnownJunction	0	36.67	51.31	46.62	106.55	61.64	53.25	133.84
35	ER7a	ExonRegion	0	39.37	52.77	46.19	126.82	47.40	62.16	133.79
36	E7a_E8a	KnownJunction	0	37.35	52.20	33.25	110.29	33.68	46.26	120.15
37	ER8a	ExonRegion	0	39.06	55.31	32.81	95.34	40.43	46.31	118.55
38	E8a_E9a	KnownJunction	0	34.77	58.69	40.78	98.15	43.69	44.59	127.51
39	E8a_E11a	NovelJunction	1	0.70	1.10	1.32	33.67	1.18	11.74	0.00
40	ER9a	ExonRegion	0	43.06	56.34	50.90	86.48	34.19	40.71	117.96
41	E9a_E10a	KnownJunction	1	43.08	59.03	44.63	68.16	42.79	24.76	105.15
42	ER10a	ExonRegion	0	41.08	63.31	41.03	71.69	49.69	31.09	122.57
43	E10a_E11a	KnownJunction	0	34.40	53.70	36.46	66.21	52.38	28.43	127.02
44	E11_Aa	NovelBoundary	1	9.30	16.63	2.44	14.03	1.13	1.66	5.66
45	ER11a	ExonRegion	0	36.02	58.26	48.83	105.39	47.65	46.54	134.60
46	E11a_E12a	KnownJunction	0	32.90	56.80	52.11	138.38	41.33	71.69	134.10
47	ER12a	ExonRegion	0	48.30	66.67	51.16	126.55	52.62	56.82	128.94
48	E12a_E13a	KnownJunction	0	0.58	0.00	0.00	0.00	0.00	0.00	0.00
49	E12a_E14a	KnownJunction	0	55.44	66.28	52.64	111.83	49.75	39.82	119.65
50	ER13a	ExonRegion	0	0.05	0.00	0.00	0.00	0.68	0.00	0.00
51	E13a_E14a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
52	ER14a	ExonRegion	0	80.76	71.30	91.20	169.80	111.72	80.13	222.72
53	E14a_E15a	KnownJunction	0	128.80	75.40	108.60	201.99	126.44	81.39	298.67
54	ER15a	ExonRegion	0	137.56	92.05	113.67	232.26	121.99	100.56	295.35
55	E15a_E16a	KnownJunction	0	132.60	95.73	116.99	222.69	124.79	117.87	267.22
56	ER16a	ExonRegion	0	114.75	97.50	105.38	191.94	102.11	77.66	288.75
57	E16a_E17a	KnownJunction	1	97.97	107.27	86.29	162.14	107.54	45.80	283.46
58	E16a_E18a	NovelJunction	1	1.39	1.34	5.10	31.75	0.00	12.06	1.26
59	ER17a	ExonRegion	0	127.17	88.68	101.76	159.70	147.77	49.40	278.73
60	E17a_E18a	KnownJunction	0	110.89	59.64	87.49	150.63	91.10	38.30	207.39
61	ER18a	ExonRegion	0	102.26	63.61	90.23	181.24	110.09	60.80	218.43
62	E18a_E19a	KnownJunction	0	66.91	46.45	63.79	165.69	59.78	68.66	183.21
63	ER19a	ExonRegion	0	76.80	63.59	80.78	184.00	80.78	85.46	239.49
64	E19a_E20a	KnownJunction	0	96.50	56.14	91.12	223.42	68.17	72.23	305.63
65	ER20a	ExonRegion	0	53.51	59.41	56.00	178.71	60.73	65.60	204.05
66	E20a_E21a	KnownJunction	0	62.47	68.78	65.00	182.54	47.81	74.50	259.90
67	ER21a	ExonRegion	0	51.70	69.34	57.76	171.76	78.90	57.62	225.88
68	E21a_E22a	KnownJunction	1	24.02	55.91	42.59	130.36	64.43	50.12	159.22
69	ER22a	ExonRegion	0	34.97	63.68	47.07	132.89	60.10	47.93	159.99
70	E22a_E23a	KnownJunction	0	37.89	64.84	29.07	105.14	45.39	39.37	150.68
71	ER23a	ExonRegion	0	44.21	68.39	37.46	116.71	55.36	57.33	157.02
72	E23a_E24a	KnownJunction	0	41.44	55.85	43.44	113.73	56.55	68.80	147.08
73	ER24a	ExonRegion	0	58.10	82.24	72.31	133.97	62.20	72.09	193.56
74	E24a_E25a	KnownJunction	0	64.06	86.88	84.94	135.86	74.44	84.34	242.83
75	E24a_E26a	NovelJunction	1	0.65	0.00	0.00	10.02	1.13	3.03	0.00
76	ER25a	ExonRegion	0	58.75	62.15	67.10	131.67	63.66	72.53	158.95
77	E25a_E26a	KnownJunction	0	61.27	56.61	67.57	147.40	51.43	84.61	148.65
78	I25_AR2	ActiveIntronRegion	0	12.57	12.14	9.56	7.96	2.77	5.83	9.29
79	E26_Aa	NovelBoundary	0	27.89	14.42	24.42	22.21	7.40	27.68	16.07
80	ER26a	ExonRegion	0	68.80	62.31	70.67	137.35	67.68	83.80	165.27
81	E26_Da	NovelBoundary	0	9.75	16.81	8.28	18.23	1.96	15.22	6.15
82	E26a_E27a	KnownJunction	0	50.74	37.67	50.31	117.17	45.92	45.24	117.82
83	E26_Db	NovelBoundary	1	8.93	23.67	6.21	6.42	0.00	14.98	2.09
84	ER26b	ExonRegion	0	3.37	5.47	2.94	4.84	0.72	9.90	1.63
85	E27_Aa	NovelBoundary	0	7.14	32.81	4.12	22.86	6.71	15.54	14.88
86	ER27a	ExonRegion	0	48.40	49.28	52.65	109.45	48.17	52.40	135.06
87	ER27b	ExonRegion	0	57.55	50.35	52.76	111.26	60.74	61.30	138.22
88	ER27c	ExonRegion	0	60.23	44.81	50.66	99.80	40.61	51.20	101.62
89	IG31	Intergenic	0	12.05	13.72	12.04	15.13	2.99	8.02	22.40
90	IG31_AR1	ActiveIntergenicRegion	0	1.88	0.54	3.54	3.74	1.08	1.77	7.42
91	IG31_AR2	ActiveIntergenicRegion	0	4.90	4.10	5.76	6.70	1.62	5.36	13.91
92	IG31_SR1	SilentIntergenicRegion	0	18.17	14.01	14.98	19.87	3.87	9.23	29.84
93	IG31_AR3	ActiveIntergenicRegion	0	12.65	17.05	13.10	16.93	2.35	9.42	17.48
94	IG31_SR2	SilentIntergenicRegion	0	10.41	9.20	12.10	11.53	2.61	6.46	17.08
95	IG31_AR4	ActiveIntergenicRegion	0	13.85	20.52	16.99	20.93	4.35	10.62	33.11
96	IG31_SR3	SilentIntergenicRegion	0	7.64	8.53	4.26	6.94	1.24	5.00	10.55