Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 POU2F3 Gene 0 54.24 119.15 13.79 5.80 10.31 24.45 5.14 2 260264 Transcript 0 42.15 145.62 13.59 6.30 10.32 26.19 4.16 3 IG48 Intergenic 0 0.70 0.98 0.39 1.51 0.04 13.25 0.72 4 IG48_AR1 ActiveIntergenicRegion 0 2.21 3.10 1.29 2.38 0.17 31.95 2.57 5 IG48_SR2 SilentIntergenicRegion 0 0.86 1.54 0.82 1.92 0.00 18.54 1.06 6 IG48_AR2 ActiveIntergenicRegion 0 0.52 1.26 0.21 1.75 0.00 11.48 0.32 7 IG48_AR3 ActiveIntergenicRegion 0 0.77 2.43 0.90 1.25 0.00 18.12 0.67 8 IG48_SR3 SilentIntergenicRegion 0 1.60 1.03 0.67 3.08 0.00 27.30 1.70 9 IG48_AR4 ActiveIntergenicRegion 0 0.31 0.88 0.11 0.96 0.00 14.51 0.58 10 IG48_AR5 ActiveIntergenicRegion 0 3.01 2.91 0.56 0.84 0.49 10.01 0.14 11 ER1a ExonRegion 0 4.87 40.67 1.24 3.41 0.51 5.59 0.50 12 E1a_E2a KnownJunction 0 15.71 99.67 4.47 5.99 3.37 11.79 2.46 13 ER2a ExonRegion 0 20.74 99.88 6.91 4.17 7.11 13.57 1.31 14 E2a_E3a KnownJunction 0 23.53 87.33 6.52 1.44 7.47 14.87 0.00 15 E2a_E4a NovelJunction 0 3.27 37.49 0.89 0.00 1.01 11.18 0.89 16 ER3a ExonRegion 0 28.85 111.42 11.17 1.25 11.87 18.92 1.95 17 E3a_E4a KnownJunction 0 24.93 102.75 12.42 1.19 12.66 14.74 3.12 18 E4_Aa NovelBoundary 0 18.93 1.55 5.53 0.00 1.08 0.00 0.00 19 ER4a ExonRegion 0 33.45 149.25 12.45 9.31 9.49 35.51 3.09 20 E4_Da NovelBoundary 1 17.51 5.23 0.60 1.68 2.03 1.10 0.69 21 E4a_E5a KnownJunction 0 47.07 152.30 13.36 4.55 13.51 18.36 4.41 22 ER5a ExonRegion 0 44.84 183.36 18.97 11.36 9.66 25.88 3.20 23 E5a_E6a KnownJunction 0 38.44 180.96 20.42 16.20 10.05 30.85 3.67 24 E6_Aa NovelBoundary 0 15.54 10.88 1.58 0.00 1.18 3.32 0.00 25 ER6a ExonRegion 0 47.33 161.41 16.97 8.70 6.37 25.97 2.64 26 E6a_E7a KnownJunction 0 69.43 140.60 13.38 6.31 7.70 24.31 2.08 27 E6a_E9a NovelJunction 0 1.02 16.50 0.00 0.00 1.04 6.35 0.00 28 I6_SR1 SilentIntronRegion 0 12.70 13.10 2.82 0.93 2.22 8.47 0.00 29 ER7a ExonRegion 0 51.69 147.02 16.05 4.49 11.77 26.54 2.20 30 E7_Da NovelBoundary 0 10.95 7.22 1.42 0.00 0.00 7.88 0.00 31 E7a_E8a KnownJunction 0 38.47 153.48 13.36 10.21 6.41 18.95 3.11 32 I7_AR1 ActiveIntronRegion 0 10.52 16.66 1.87 1.85 1.07 7.93 1.04 33 E8_Aa NovelBoundary 0 9.25 35.78 2.95 1.27 2.31 13.37 5.10 34 ER8a ExonRegion 0 55.08 208.26 13.77 6.78 8.29 34.66 5.75 35 E8_Da NovelBoundary 0 2.39 14.06 0.00 1.33 0.00 8.28 0.75 36 E8a_E9a KnownJunction 0 72.58 236.97 21.58 10.97 30.08 30.07 8.71 37 E9_Aa NovelBoundary 0 25.70 8.83 6.70 1.60 0.00 4.18 0.00 38 ER9a ExonRegion 0 54.64 192.79 12.23 7.51 14.66 40.01 8.51 39 E9a_E10a KnownJunction 0 28.89 141.45 6.94 7.31 8.51 25.97 6.09 40 ER10a ExonRegion 0 46.49 166.04 14.23 6.20 9.63 27.61 6.41 41 E10a_E11a KnownJunction 0 35.48 141.39 11.07 1.25 12.54 24.39 5.70 42 E10a_E12a NovelJunction 0 1.69 11.51 0.79 3.74 0.00 3.32 0.00 43 ER11a ExonRegion 0 42.31 147.09 16.76 1.19 9.96 28.45 5.64 44 E11a_E12a KnownJunction 0 44.55 146.67 20.46 6.07 10.58 34.01 5.63 45 ER12a ExonRegion 0 64.61 183.61 19.02 8.19 11.35 45.07 6.79 46 E12a_E13a KnownJunction 0 56.20 177.20 21.90 8.18 13.42 57.81 5.17 47 ER13a ExonRegion 0 63.48 88.87 14.03 5.24 11.16 20.79 5.88 48 IG49_SR1 SilentIntergenicRegion 0 7.78 12.21 1.14 0.96 3.33 2.07 0.17 49 IG49_AR1 ActiveIntergenicRegion 0 18.33 16.70 2.06 2.14 2.17 5.16 1.95