Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MLL	Gene	0	134.41	319.13	194.79	534.91	96.74	416.74	47.95
2	354520	Transcript	0	2.65	26.19	0.00	27.90	0.00	14.95	0.00
3	359313	Transcript	0	0	0	0	0	0	0	0
4	328469	Transcript	0	18.59	65.79	19.49	116.72	5.67	49.26	5.15
5	389506	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	389507	Transcript	0	2.89	7.12	6.59	14.74	1.67	4.60	0.27
7	392873	Transcript	0	9.75	29.65	15.76	34.02	6.71	20.47	4.53
8	ER1a	ExonRegion	0	8.01	63.32	8.33	72.95	2.69	46.09	1.65
9	E1a_E2a	KnownJunction	1	8.56	60.45	11.54	85.85	4.68	27.17	5.96
10	E1a_E5a	KnownJunction	0	20.61	146.10	30.34	194.79	8.51	133.17	7.78
11	E1a_E6a	NovelJunction	0	0.92	6.70	0.00	11.73	0.00	14.93	0.00
12	E1a_E7a	NovelJunction	1	0.00	16.42	0.00	0.00	0.00	1.47	0.00
13	ER2a	ExonRegion	0	28.21	76.22	30.25	131.15	7.79	52.92	6.02
14	E2a_E5a	KnownJunction	0	19.01	60.71	16.68	133.15	4.54	67.70	3.47
15	I2	Intron	0	32.61	19.88	17.29	10.11	8.17	6.14	3.35
16	I2_AR3	ActiveIntronRegion	0	35.54	26.04	20.27	11.27	6.28	4.33	4.45
17	I2_SR3	SilentIntronRegion	1	52.99	22.52	26.77	9.01	7.95	1.85	2.71
18	I2_AR5	ActiveIntronRegion	1	54.40	30.20	26.38	12.66	8.96	4.60	1.72
19	I2_SR4	SilentIntronRegion	0	37.81	20.71	21.11	8.60	7.20	4.98	2.77
20	I2_AR7	ActiveIntronRegion	0	50.82	20.70	25.05	11.89	9.15	6.91	6.15
21	I2_SR5	SilentIntronRegion	0	52.98	33.37	24.14	15.96	24.56	7.68	5.43
22	I2_AR8	ActiveIntronRegion	1	80.58	45.97	29.09	25.33	27.84	18.33	7.18
23	I2_SR6	SilentIntronRegion	1	78.85	60.27	30.29	45.10	23.08	20.23	7.57
24	I2_AR9	ActiveIntronRegion	1	47.71	39.60	19.50	18.60	16.70	14.74	5.67
25	I2_AR10	ActiveIntronRegion	1	41.52	48.76	17.85	31.14	18.40	35.42	5.83
26	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER5a	ExonRegion	0	61.28	271.35	86.67	375.53	13.81	237.88	15.80
29	E5a_E6a	KnownJunction	0	50.82	254.91	89.30	335.01	18.74	225.87	12.77
30	E5a_E6c	KnownJunction	1	5.77	14.24	13.18	29.48	3.34	9.19	0.54
31	ER6a	ExonRegion	0	97.04	297.65	152.26	429.30	34.48	262.79	27.12
32	E6_Ab	KnownBoundary	0	167.53	262.71	192.36	374.29	42.56	245.70	23.95
33	ER6b	ExonRegion	0	149.00	304.22	171.68	447.47	51.99	275.54	30.82
34	E6_Ac	KnownBoundary	0	89.88	259.61	101.18	402.19	43.78	229.78	27.62
35	ER6c	ExonRegion	0	101.75	307.10	145.47	489.90	49.29	261.24	29.28
36	E6a_E7a	KnownJunction	0	94.43	296.63	156.31	509.50	45.60	255.00	36.56
37	ER7a	ExonRegion	0	103.62	356.30	150.84	471.27	47.43	270.10	36.21
38	E7a_E8a	KnownJunction	0	127.06	399.64	192.33	535.86	55.83	329.29	35.05
39	ER8a	ExonRegion	0	209.65	410.88	201.80	545.20	67.78	338.14	39.76
40	E8a_E9a	KnownJunction	1	336.97	573.95	308.62	742.81	76.40	550.71	48.66
41	ER9a	ExonRegion	1	290.61	617.06	288.47	786.21	71.90	563.61	47.03
42	E9_Da	NovelBoundary	0	150.06	321.61	136.65	398.62	26.60	263.07	21.64
43	E9b_E10a	KnownJunction	1	260.78	544.42	248.95	760.85	55.21	538.65	35.37
44	ER9b	ExonRegion	1	263.92	576.25	260.94	771.45	57.86	519.28	40.10
45	ER10a	ExonRegion	0	149.54	323.18	177.37	496.47	57.27	351.98	33.46
46	E10a_E11a	KnownJunction	0	105.33	185.79	119.62	308.49	43.55	220.37	22.21
47	E10a_E12a	NovelJunction	0	6.44	44.61	8.85	59.84	0.00	31.09	0.89
48	ER11a	ExonRegion	0	84.19	175.89	106.61	279.52	31.30	189.91	22.98
49	E11a_E12a	KnownJunction	0	76.41	150.01	116.00	263.84	33.70	167.12	24.12
50	ER12a	ExonRegion	0	80.83	201.47	131.83	322.34	35.91	199.51	30.65
51	E12a_E13a	KnownJunction	0	57.70	190.21	111.53	318.21	27.76	195.34	24.52
52	E12a_E15a	KnownJunction	0	2.65	26.19	0.00	27.90	0.00	14.95	0.00
53	ER13a	ExonRegion	0	71.90	171.08	133.78	302.36	60.90	196.42	36.64
54	E13a_E15a	KnownJunction	0	99.14	152.16	161.95	339.05	48.50	217.16	43.34
55	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
56	ER15a	ExonRegion	0	81.94	210.22	109.34	368.64	55.59	228.44	38.44
57	E15a_E16a	KnownJunction	0	120.07	275.27	135.25	464.67	59.02	294.05	59.83
58	ER16a	ExonRegion	0	124.19	301.08	145.74	491.68	85.14	337.83	52.96
59	E16a_E17a	KnownJunction	0	78.21	220.65	89.71	375.59	41.82	253.39	40.26
60	ER17a	ExonRegion	0	94.43	251.33	118.69	386.43	67.36	241.01	41.57
61	E17a_E18a	KnownJunction	0	85.39	237.70	96.44	340.91	50.55	185.78	32.65
62	ER18a	ExonRegion	0	73.60	237.68	115.00	399.50	48.29	235.47	33.53
63	E18a_E19a	KnownJunction	0	49.24	186.34	97.00	307.02	30.22	187.76	20.09
64	E18b_E19a	KnownJunction	0	13.29	42.93	23.04	52.88	9.71	29.27	6.16
65	ER18b	ExonRegion	0	15.97	46.03	24.24	49.19	10.44	32.15	7.42
66	ER19a	ExonRegion	0	64.84	242.84	100.67	346.98	44.61	221.24	26.95
67	E19a_E20a	KnownJunction	0	42.11	221.07	71.00	281.56	17.06	231.04	19.23
68	ER20a	ExonRegion	0	58.76	248.43	97.10	322.69	40.77	233.73	25.86
69	E20_Da	KnownBoundary	0	74.82	279.95	113.87	372.42	33.47	243.56	39.97
70	ER20b	ExonRegion	0	95.28	268.47	112.93	372.20	56.16	234.13	33.26
71	E20b_E21a	KnownJunction	0	143.05	275.48	153.48	412.95	101.92	246.96	28.42
72	ER21a	ExonRegion	0	217.21	332.38	215.99	611.06	122.51	322.44	48.25
73	E21a_E22a	KnownJunction	1	361.97	455.26	307.70	818.61	168.10	403.42	57.78
74	ER22a	ExonRegion	1	403.17	459.53	338.44	873.19	139.39	441.43	60.88
75	E22a_E23a	KnownJunction	1	353.06	353.01	322.66	771.42	179.54	423.65	64.88
76	ER23a	ExonRegion	0	204.03	285.94	206.03	478.42	114.21	322.94	51.61
77	E23a_E24a	KnownJunction	0	148.04	298.63	185.09	456.38	93.48	327.49	52.64
78	ER24a	ExonRegion	0	91.95	251.10	141.49	426.60	83.63	268.99	43.74
79	E24_Da	NovelBoundary	0	36.27	32.50	24.43	19.80	19.09	12.78	5.63
80	E24a_E25a	KnownJunction	0	64.37	198.74	130.45	452.15	52.35	287.24	36.46
81	ER25a	ExonRegion	0	114.52	251.49	164.19	451.57	77.38	296.64	43.14
82	E25_Da	KnownBoundary	0	140.78	297.73	169.99	463.45	76.44	314.31	42.95
83	ER25b	ExonRegion	0	107.55	263.18	154.88	468.22	85.00	314.72	45.58
84	E25b_E26a	KnownJunction	0	101.34	241.49	159.61	434.41	59.68	296.59	42.56
85	ER26a	ExonRegion	0	119.10	259.30	186.23	425.68	79.95	291.21	50.65
86	E26a_E27a	KnownJunction	0	124.96	246.27	187.92	444.97	89.03	288.18	46.15
87	ER27a	ExonRegion	0	135.02	267.19	204.19	459.90	91.40	298.43	50.34
88	E27a_E28a	KnownJunction	0	123.86	272.51	209.84	486.83	92.70	307.77	53.08
89	ER28a	ExonRegion	0	177.50	295.90	232.02	513.18	111.13	325.67	56.58
90	E28a_E29a	KnownJunction	1	269.19	310.40	266.70	543.83	175.46	317.04	49.27
91	ER29a	ExonRegion	0	337.53	384.47	328.38	671.83	154.17	398.59	65.93
92	E29a_E30a	KnownJunction	1	504.07	450.63	419.11	768.79	131.68	535.22	67.46
93	E30_Aa	NovelBoundary	1	237.81	1.18	182.95	1.57	0.00	3.00	0.57
94	ER30a	ExonRegion	0	293.55	343.30	297.59	555.76	146.45	360.09	62.69
95	E30a_E31a	KnownJunction	0	208.66	280.47	209.38	399.00	122.66	273.25	51.78
96	ER31a	ExonRegion	0	158.04	393.76	236.18	632.48	114.76	502.71	60.86
97	E31a_E32a	KnownJunction	0	78.43	263.66	138.52	513.48	68.93	301.74	46.95
98	E31a_E33a	NovelJunction	0	6.23	33.63	8.35	45.32	0.00	63.38	0.00
99	E31a_E34a	NovelJunction	0	3.86	20.96	1.21	16.53	0.00	14.93	0.00
100	ER32a	ExonRegion	0	89.76	268.71	143.29	550.77	84.98	358.88	44.19
101	E32a_E33a	KnownJunction	0	117.41	286.99	158.58	580.24	88.66	408.80	45.56
102	ER33a	ExonRegion	0	126.47	332.72	197.34	598.23	111.93	416.14	50.01
103	E33a_E34a	KnownJunction	0	133.67	348.62	220.05	554.64	114.04	443.00	52.62
104	ER34a	ExonRegion	0	167.18	355.87	284.62	630.47	141.94	500.59	64.46
105	E34a_E35a	KnownJunction	0	213.20	347.78	372.84	711.82	123.49	554.73	82.72
106	ER35a	ExonRegion	0	162.21	342.23	304.61	667.51	144.55	535.34	66.67
107	E35a_E36a	KnownJunction	0	106.73	328.52	226.98	534.40	136.75	467.15	40.64
108	ER36a	ExonRegion	0	127.68	322.17	234.87	590.74	140.08	460.27	64.89
109	E36a_E37a	KnownJunction	0	112.31	294.27	216.85	598.55	94.49	462.99	65.06
110	ER37a	ExonRegion	0	83.52	306.45	182.63	581.43	120.89	424.24	53.61
111	E37a_E38a	KnownJunction	0	79.19	319.43	147.87	539.14	109.32	370.99	38.39
112	ER38a	ExonRegion	0	96.37	335.14	179.26	610.71	134.78	421.68	52.49
113	E38a_E39a	KnownJunction	0	88.76	322.59	181.77	603.29	145.90	436.41	54.82
114	ER39a	ExonRegion	0	97.09	381.91	177.88	663.38	159.94	461.70	58.48
115	E39a_E40a	KnownJunction	0	127.46	370.32	214.07	717.35	150.00	466.42	60.82
116	ER40a	ExonRegion	0	137.61	303.96	218.42	619.67	148.65	607.16	59.13
117	IG6	Intergenic	0	67.36	71.42	85.40	226.99	68.19	274.86	22.06
118	IG6_AR1	ActiveIntergenicRegion	0	67.42	71.46	85.47	227.16	68.24	275.07	22.08