Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FOXRED1	Gene	0	33.09	19.52	24.12	18.85	162.63	29.76	34.15
2	263578	Transcript	0	36.76	17.97	25.97	16.35	170.67	22.45	34.12
3	ER1a	ExonRegion	1	23.06	7.09	14.97	9.46	125.96	12.22	10.51
4	E1_Da	NovelBoundary	0	2.24	6.12	2.79	13.79	2.14	15.01	2.94
5	E1a_E2a	KnownJunction	0	3.72	4.41	4.44	1.16	14.06	1.66	10.29
6	I1	Intron	0	8.54	6.76	10.91	8.13	10.89	10.59	3.36
7	I1_AR1	ActiveIntronRegion	0	9.35	8.82	11.47	7.71	8.17	12.86	2.57
8	I1_AR2	ActiveIntronRegion	0	11.26	6.25	16.15	12.46	15.80	12.20	4.83
9	E2_Aa	NovelBoundary	1	6.74	10.35	23.39	9.27	14.85	17.98	4.69
10	ER2a	ExonRegion	0	33.49	18.49	24.95	14.63	159.12	25.48	30.88
11	E2_Da	NovelBoundary	0	1.37	3.05	3.28	0.00	9.52	8.36	3.45
12	E2a_E3a	KnownJunction	0	42.58	19.65	27.94	17.42	153.99	14.18	28.06
13	I2_AR1	ActiveIntronRegion	0	1.66	3.70	3.92	2.56	8.16	10.77	2.27
14	I2_SR1	SilentIntronRegion	0	2.94	4.70	1.49	1.76	3.72	8.17	2.42
15	ER3a	ExonRegion	0	53.51	23.84	40.01	19.79	188.42	24.40	45.71
16	E3a_E4a	KnownJunction	0	54.59	18.84	38.05	31.75	205.24	17.10	45.26
17	E4_Aa	NovelBoundary	0	5.19	1.37	2.85	5.55	6.20	10.16	4.99
18	ER4a	ExonRegion	0	55.40	18.99	37.14	21.04	212.45	27.74	38.15
19	E4a_E5a	KnownJunction	0	48.08	8.49	25.64	11.38	230.71	18.71	30.70
20	ER5a	ExonRegion	0	46.18	15.22	24.96	13.62	223.43	14.93	31.42
21	E5a_E6a	KnownJunction	0	41.54	16.10	24.53	7.67	179.70	6.89	29.61
22	E6_Aa	NovelBoundary	0	0.63	7.72	2.31	1.68	7.33	6.32	0.89
23	ER6a	ExonRegion	0	35.67	22.38	28.26	16.04	157.26	19.34	30.93
24	E6_Da	NovelBoundary	0	1.03	8.12	0.89	7.91	6.25	1.66	0.00
25	E6a_E7a	KnownJunction	0	32.80	21.81	29.72	17.83	176.72	21.41	36.65
26	ER7a	ExonRegion	0	40.34	27.18	28.98	20.99	222.13	22.34	39.22
27	E7a_E8a	KnownJunction	0	41.37	35.57	28.65	25.52	208.40	26.45	43.31
28	ER8a	ExonRegion	0	31.26	20.71	22.57	22.75	170.10	30.47	40.32
29	E8a_E9a	KnownJunction	0	33.35	19.23	21.37	14.28	200.44	25.94	40.17
30	E9_Aa	NovelBoundary	0	0.00	10.22	0.89	1.68	3.11	8.39	0.82
31	ER9a	ExonRegion	0	31.02	19.05	23.26	15.12	180.31	32.07	40.73
32	E9_Da	NovelBoundary	0	7.98	8.22	4.81	4.71	1.18	9.78	0.89
33	E9a_E10a	KnownJunction	1	24.88	16.92	27.98	7.96	116.42	32.59	31.31
34	ER10a	ExonRegion	0	32.40	13.56	24.02	17.24	162.63	30.99	36.90
35	E10_Da	NovelBoundary	0	5.14	2.86	4.11	2.74	8.16	10.64	3.84
36	E10a_E11a	KnownJunction	1	41.07	8.17	27.72	15.44	157.61	27.42	42.02
37	ER11a	ExonRegion	0	25.75	21.63	20.12	22.36	138.99	39.22	34.35