Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	BCO2	Gene	0	3.20	1.53	6.55	4.15	1.22	4.70	29.41
2	357685	Transcript	0	0	0	0	0	0	0	0
3	361053	Transcript	0	1.03	0.00	0.00	0.00	0.00	0.00	4.41
4	393032	Transcript	0	0.00	0.00	0.27	0.00	0.00	0.00	0.01
5	355750	Transcript	0	0.00	0.00	0.08	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	1.09	0.90	0.64	1.97	0.00	0.84	25.81
7	E1a_E4a	KnownJunction	0	0.72	0.00	0.89	1.46	0.00	2.97	28.16
8	ER2a	ExonRegion	0	0.00	0.00	0.53	0.00	0.00	0.00	0.01
9	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER3a	ExonRegion	0	0.00	0.00	0.08	0.00	0.00	0.00	0.00
11	ER4a	ExonRegion	0	1.09	0.90	3.20	2.94	0.59	4.67	33.28
12	E4a_E5a	KnownJunction	0	0.00	0.00	1.37	1.57	0.00	5.39	30.55
13	ER5a	ExonRegion	0	5.73	4.43	9.58	5.85	1.62	9.41	40.85
14	E5a_E6a	KnownJunction	0	3.44	3.86	9.48	1.68	0.92	3.32	41.27
15	E5a_E8a	KnownJunction	0	1.03	0.00	0.00	0.00	0.00	0.00	4.41
16	E6_Aa	NovelBoundary	0	1.97	0.00	3.62	3.82	0.00	3.27	9.92
17	ER6a	ExonRegion	0	5.69	1.60	12.99	5.29	1.84	3.48	34.90
18	E6a_E7a	KnownJunction	0	4.39	2.78	5.76	4.44	0.00	1.31	33.71
19	ER7a	ExonRegion	0	3.58	1.12	9.14	4.76	2.00	4.68	30.40
20	E7_Da	NovelBoundary	0	2.79	0.00	3.00	0.00	1.08	0.00	10.00
21	E7a_E8a	KnownJunction	0	2.20	0.00	5.14	1.16	3.34	2.63	15.55
22	I7	Intron	0	1.19	0.31	3.51	0.84	0.66	0.92	8.32
23	I7_SR1	SilentIntronRegion	0	1.28	0.33	3.64	0.79	0.66	0.98	8.08
24	I7_AR1	ActiveIntronRegion	0	0.00	0.00	1.96	1.42	0.65	0.16	11.72
25	E8_Aa	NovelBoundary	0	0.00	0.00	6.11	1.46	0.00	0.00	8.43
26	ER8a	ExonRegion	0	1.60	0.66	5.08	2.20	0.97	2.26	31.47
27	E8_Da	NovelBoundary	0	0.00	1.63	2.86	0.00	1.11	1.47	12.67
28	E8a_E9a	KnownJunction	0	5.24	0.97	5.59	1.16	0.00	2.65	25.62
29	I8	Intron	0	0.62	0.12	4.69	1.01	0.38	0.99	8.97
30	I8_AR1	ActiveIntronRegion	0	0.67	0.18	4.93	1.27	0.47	1.42	10.40
31	ER9a	ExonRegion	0	7.01	0.05	12.73	3.61	2.49	4.67	41.06
32	E9a_E10a	KnownJunction	0	8.36	0.00	17.45	4.31	6.43	6.97	53.44
33	ER10a	ExonRegion	0	7.53	2.00	13.96	6.66	2.36	5.90	51.43
34	E10a_E11a	KnownJunction	0	7.39	1.50	11.74	5.55	2.17	8.50	48.83
35	ER11a	ExonRegion	0	6.27	3.42	11.95	11.70	3.16	12.59	53.87
36	E11a_E12a	KnownJunction	0	4.41	2.99	8.16	5.91	0.00	5.71	48.48
37	ER12a	ExonRegion	0	4.78	1.26	8.17	7.52	1.40	7.03	43.69
38	E12_Da	NovelBoundary	0	2.64	0.00	1.52	1.38	0.00	0.00	8.57
39	E12a_E13a	KnownJunction	0	1.82	2.15	7.79	4.17	2.10	6.91	30.41
40	I12_AR1	ActiveIntronRegion	0	1.37	0.00	1.54	0.46	0.39	0.90	7.46
41	E13_Aa	NovelBoundary	0	3.34	0.00	4.79	0.00	1.18	3.32	8.41
42	ER13a	ExonRegion	0	2.51	2.87	11.95	7.91	1.61	11.41	41.68
43	E13a_E14a	KnownJunction	0	6.04	2.57	7.04	7.34	1.18	8.79	42.36
44	ER14a	ExonRegion	0	1.94	1.29	4.11	2.78	0.83	3.18	17.91
45	IG40_SR1	SilentIntergenicRegion	0	1.68	2.17	2.04	1.84	0.39	0.89	10.33
46	IG40_AR2	ActiveIntergenicRegion	0	1.68	0.52	3.21	1.11	0.24	1.61	10.00
47	IG40_AR3	ActiveIntergenicRegion	0	2.90	0.94	4.23	3.61	0.10	2.75	9.69
48	IG40_AR4	ActiveIntergenicRegion	0	17.79	19.03	7.30	13.69	0.44	60.90	5.49