Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SNF1LK2	Gene	0	202.40	114.29	142.78	246.74	49.39	241.85	66.27
2	304987	Transcript	0	269.91	150.40	180.39	316.66	47.55	311.68	71.76
3	IG24_AR1	ActiveIntergenicRegion	0	1.05	1.36	14.38	22.43	1.07	14.39	9.75
4	IG24_AR2	ActiveIntergenicRegion	0	0.77	0.00	16.20	23.64	4.56	19.73	19.41
5	IG24_AR3	ActiveIntergenicRegion	0	0.77	0.00	13.89	23.80	3.78	21.66	17.60
6	IG24_AR4	ActiveIntergenicRegion	0	0.68	0.00	14.07	24.80	4.77	27.24	15.37
7	IG24_SR1	SilentIntergenicRegion	0	1.83	1.53	12.34	22.71	1.21	15.29	10.52
8	IG24_AR5	ActiveIntergenicRegion	0	0.54	1.15	5.43	8.77	0.11	4.30	2.17
9	ER1a	ExonRegion	0	32.04	26.60	20.28	66.03	6.95	67.06	11.90
10	E1a_E2a	KnownJunction	1	167.08	88.77	79.35	143.12	19.13	158.41	27.39
11	E1a_E4a	NovelJunction	1	0.00	0.00	0.00	2.87	0.00	8.71	0.00
12	ER2a	ExonRegion	1	298.26	144.86	164.57	294.84	40.03	296.64	41.51
13	E2a_E3a	KnownJunction	1	441.78	189.36	202.71	369.69	61.23	422.71	72.03
14	ER3a	ExonRegion	1	580.88	195.50	284.79	436.83	77.40	470.76	74.67
15	E3a_E4a	KnownJunction	1	595.21	167.48	313.49	445.49	98.85	446.54	64.18
16	ER4a	ExonRegion	1	535.43	132.28	291.43	345.12	73.46	312.38	66.26
17	E4a_E5a	KnownJunction	1	347.00	105.27	238.63	234.91	49.17	254.73	46.28
18	E4a_E6a	NovelJunction	1	2.90	0.00	0.83	6.04	0.00	12.78	0.00
19	ER5a	ExonRegion	0	310.44	124.69	198.77	255.57	41.21	249.44	53.88
20	E5a_E6a	KnownJunction	0	161.27	118.77	153.42	200.45	38.82	198.02	50.25
21	ER6a	ExonRegion	0	187.23	124.21	158.58	237.76	37.69	208.22	62.24
22	E6a_E7a	KnownJunction	0	265.22	129.75	198.54	293.18	38.13	220.48	77.15
23	ER7a	ExonRegion	0	375.96	197.29	259.64	386.43	53.35	356.89	99.60
24	E7a_E8a	KnownJunction	0	462.08	210.78	297.97	425.87	73.10	362.63	124.20
25	ER8a	ExonRegion	0	291.08	156.84	195.93	330.20	44.26	291.25	79.19
26	E8a_E9a	KnownJunction	0	200.40	119.27	146.36	266.63	43.78	265.08	83.12
27	ER9a	ExonRegion	0	166.51	153.55	127.15	311.03	33.59	265.64	70.71
28	E9a_E10a	KnownJunction	0	132.07	189.68	98.41	318.92	36.65	271.35	74.82
29	I9_SR2	SilentIntronRegion	0	10.95	10.88	8.23	11.21	17.58	10.15	5.57
30	I9_AR4	ActiveIntronRegion	0	24.19	20.20	11.59	15.89	19.47	11.67	6.82
31	I9_SR3	SilentIntronRegion	0	9.55	5.53	9.51	7.57	12.47	6.06	5.23
32	E10_Aa	NovelBoundary	0	12.40	8.67	9.21	10.16	31.42	9.89	6.74
33	ER10a	ExonRegion	0	163.60	176.03	136.57	343.26	53.75	324.20	90.13
34	E10a_E11a	KnownJunction	0	157.79	164.72	137.45	350.21	48.13	357.16	91.46
35	I10	Intron	0	14.27	6.42	7.34	10.18	21.03	4.71	7.67
36	I10_AR1	ActiveIntronRegion	0	7.75	4.39	3.77	7.74	14.34	2.94	6.59
37	I10_AR2	ActiveIntronRegion	0	16.18	7.10	8.32	11.13	23.09	5.26	8.19
38	ER11a	ExonRegion	0	236.71	182.40	190.98	390.58	58.71	374.82	98.20
39	E11_Da	NovelBoundary	0	8.70	7.36	6.88	15.60	18.12	3.97	5.36
40	E11a_E12a	KnownJunction	0	341.64	206.18	239.52	415.31	43.78	448.17	92.52
41	ER12a	ExonRegion	0	241.20	181.18	188.09	358.42	48.30	405.21	84.02
42	E12a_E13a	KnownJunction	0	172.01	149.22	126.24	296.62	37.76	312.99	58.87
43	I12	Intron	0	16.39	9.68	9.84	11.74	12.20	7.57	3.04
44	I12_SR1	SilentIntronRegion	0	16.00	9.56	7.44	10.66	11.21	12.69	2.72
45	I12_AR1	ActiveIntronRegion	0	14.69	8.49	7.05	10.08	12.10	7.72	2.51
46	I12_SR2	SilentIntronRegion	0	18.34	10.93	13.86	13.98	12.92	4.71	3.75
47	E13_Aa	NovelBoundary	1	82.62	8.83	52.51	4.23	8.41	5.52	3.83
48	ER13a	ExonRegion	0	193.04	152.36	157.14	314.68	52.36	330.57	71.69
49	E13a_E14a	KnownJunction	0	252.15	147.23	223.49	379.33	47.49	401.03	91.52
50	I13	Intron	0	10.70	8.53	8.95	10.19	12.03	4.74	5.23
51	I13_SR1	SilentIntronRegion	0	10.78	8.58	9.02	10.27	12.12	4.77	5.27
52	E14_Aa	NovelBoundary	1	117.61	10.67	92.34	17.15	14.20	3.00	6.32
53	ER14a	ExonRegion	0	204.85	171.84	161.40	390.29	41.44	402.22	89.81
54	E14a_E15a	KnownJunction	0	144.47	164.04	117.56	378.03	28.70	360.30	70.63
55	I14	Intron	0	7.82	8.98	6.47	11.66	10.30	5.54	5.20
56	I14_SR1	SilentIntronRegion	0	7.84	9.01	6.48	11.69	10.32	5.55	5.21
57	ER15a	ExonRegion	0	170.04	91.59	122.82	204.40	51.74	203.71	62.70