Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 SYTL2 Gene 0 168.66 91.97 11.30 5.01 6.65 9.08 16.85 2 316356 Transcript 0 168.51 134.96 18.33 6.11 3.74 8.41 22.02 3 359152 Transcript 0 47.54 31.64 2.43 0.99 2.18 1.47 5.22 4 389960 Transcript 0 0 0 0 0 0 0 0 5 389959 Transcript 0 0 0 0 0 0 0 0 6 354566 Transcript 0 0 0 0 0 0 0 0 7 389956 Transcript 0 0.00 0.00 0.00 0.00 0.00 1.50 0.00 8 389958 Transcript 0 14.14 10.75 0.49 1.08 1.06 3.01 0.60 9 IG16_AR6 ActiveIntergenicRegion 0 10.69 15.57 0.50 0.00 0.20 3.62 2.73 10 IG16_AR1 ActiveIntergenicRegion 0 27.90 27.69 3.95 1.69 1.45 3.27 6.74 11 ER1a ExonRegion 0 174.35 95.83 17.50 3.88 4.65 6.50 19.58 12 E1a_E2a KnownJunction 1 155.77 80.89 25.45 1.68 7.84 7.75 23.10 13 ER2a ExonRegion 0 180.08 107.97 20.46 6.96 4.75 10.53 22.39 14 E2a_E3a KnownJunction 1 155.52 129.52 21.20 6.72 3.37 15.30 21.86 15 ER3a ExonRegion 0 145.08 144.79 18.80 7.09 3.19 10.29 27.55 16 E3a_E4a KnownJunction 0 153.56 158.21 15.45 9.10 5.65 11.23 20.81 17 ER4a ExonRegion 1 167.38 167.89 14.58 7.10 3.91 6.28 24.00 18 E4a_E5a KnownJunction 1 168.40 172.21 15.33 11.43 0.97 5.33 31.36 19 ER5a ExonRegion 0 213.79 200.94 19.77 6.19 4.03 10.45 27.30 20 E5a_E6a KnownJunction 1 247.66 210.43 20.31 5.04 1.01 6.30 19.23 21 ER6a ExonRegion 1 271.84 196.91 22.81 8.37 4.78 7.85 29.17 22 E6a_E7b KnownJunction 1 170.80 127.42 16.71 2.84 3.25 4.98 20.47 23 ER7a ExonRegion 0 4.44 5.66 0.29 0.04 0.05 0.93 0.36 24 E7_Ab KnownBoundary 0 4.09 8.28 0.00 0.00 0.00 1.66 0.00 25 ER7b ExonRegion 1 226.01 165.73 18.66 5.83 5.08 5.87 26.82 26 E7_Da KnownBoundary 1 78.89 61.40 2.07 0.00 3.99 0.00 9.36 27 E7a_E8a KnownJunction 1 147.12 91.27 16.64 9.10 5.00 2.57 16.81 28 ER7c ExonRegion 0 90.65 57.61 4.57 1.95 4.30 2.00 10.08 29 E7_Ac KnownBoundary 1 93.08 52.04 6.98 1.57 3.99 3.00 19.81 30 ER7d ExonRegion 0 101.08 56.71 5.00 2.03 5.14 1.92 8.93 31 E7b_E8a KnownJunction 0 73.55 25.61 2.64 1.27 5.16 0.00 5.68 32 ER8a ExonRegion 0 249.15 119.02 17.17 6.48 12.75 5.97 26.41 33 E8_Da NovelBoundary 1 16.06 46.26 0.89 0.00 0.90 0.00 0.89 34 E8a_E9b KnownJunction 0 241.84 104.11 17.52 6.91 21.02 8.63 19.33 35 I8 Intron 0 14.18 21.81 0.71 0.15 0.32 0.52 1.14 36 I8_SR1 SilentIntronRegion 0 15.61 23.71 0.48 0.00 0.52 0.89 1.14 37 I8_AR1 ActiveIntronRegion 0 18.60 26.30 1.04 0.00 0.24 0.37 1.82 38 I8_AR2 ActiveIntronRegion 0 8.70 23.87 0.92 0.90 0.19 0.82 0.48 39 ER9a ExonRegion 0 9.11 13.10 1.13 3.29 1.00 3.77 1.24 40 E9_Da KnownBoundary 0 15.69 12.72 0.50 4.14 1.11 1.63 1.53 41 E9a_E9b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 1.50 0.00 42 ER9b ExonRegion 1 15.93 19.13 0.98 2.16 2.11 6.02 1.19 43 E9_Ab KnownBoundary 1 10.46 25.19 4.99 1.68 7.45 5.41 1.45 44 ER9c ExonRegion 0 255.12 116.47 24.14 11.53 15.37 11.66 29.34 45 E9_Db NovelBoundary 1 46.15 33.92 2.27 1.33 0.00 0.00 1.25 46 E9b_E10a KnownJunction 0 109.35 17.52 13.42 8.99 6.89 8.63 19.63 47 E9b_E11a KnownJunction 1 88.51 79.89 2.86 1.46 0.00 1.47 7.44 48 E9b_E12a KnownJunction 0 12.35 2.36 0.00 0.00 0.00 0.00 0.00 49 I9 Intron 0 44.25 24.83 3.79 0.89 0.97 0.70 3.47 50 I9_AR1 ActiveIntronRegion 0 35.14 22.56 2.96 1.63 1.89 0.54 1.32 51 I9_AR2 ActiveIntronRegion 1 48.31 25.87 3.82 0.31 0.54 0.45 3.71 52 I9_AR3 ActiveIntronRegion 1 42.48 25.15 4.40 1.90 1.49 1.50 4.52 53 E10_Aa NovelBoundary 0 34.11 34.49 2.39 0.00 0.00 1.42 2.65 54 ER10a ExonRegion 0 123.78 24.58 16.40 6.86 8.17 10.86 25.47 55 E10a_E11a KnownJunction 1 102.11 18.10 13.77 3.93 8.62 16.16 20.95 56 I10 Intron 0 38.08 15.31 2.01 0.30 0.54 0.76 2.47 57 I10_AR2 ActiveIntronRegion 1 52.97 28.82 2.53 0.00 1.02 0.00 4.14 58 I10_SR2 SilentIntronRegion 0 41.84 19.05 2.07 0.77 1.17 2.04 2.55 59 I10_AR3 ActiveIntronRegion 0 41.11 11.94 2.46 0.37 0.28 0.48 2.50 60 ER11a ExonRegion 0 187.56 101.28 15.84 11.21 14.18 14.66 26.65 61 E11a_E12a KnownJunction 1 175.04 81.05 12.98 6.61 10.03 2.47 25.58 62 E11a_E13a KnownJunction 1 7.76 5.15 11.57 0.00 0.00 12.35 4.63 63 ER12a ExonRegion 1 222.83 90.60 9.42 4.17 12.41 2.50 26.34 64 E12a_E13a KnownJunction 1 252.17 78.16 5.82 4.82 10.65 3.86 23.86 65 ER13a ExonRegion 0 442.69 142.16 22.10 7.14 17.60 27.87 30.61 66 E13a_E14a KnownJunction 1 640.78 185.16 27.68 5.63 15.72 36.31 29.49 67 ER14a ExonRegion 1 484.58 137.04 23.93 5.80 18.65 29.53 27.79 68 E14a_E15a KnownJunction 0 306.64 109.03 20.31 6.88 19.66 15.65 15.68 69 E14a_E16a NovelJunction 0 41.09 7.51 0.50 0.00 1.75 0.00 1.22 70 ER15a ExonRegion 1 239.80 85.82 16.13 8.54 9.13 17.46 19.73 71 E15a_E16a KnownJunction 1 179.67 82.05 13.98 15.33 12.89 22.16 19.95 72 I15_SR2 SilentIntronRegion 0 35.99 18.18 1.69 0.39 0.88 0.38 1.18 73 I15_AR3 ActiveIntronRegion 0 37.44 10.70 1.69 0.91 1.23 0.15 2.19 74 ER16a ExonRegion 0 214.19 102.91 17.08 11.29 13.69 14.98 24.99 75 E16a_E17a KnownJunction 0 206.64 108.16 12.70 10.27 11.71 19.48 28.79 76 ER17a ExonRegion 1 240.76 128.85 15.00 14.95 16.38 33.76 34.16 77 E17_Da NovelBoundary 0 46.93 36.15 4.10 3.01 0.00 2.65 2.59 78 E17a_E18a KnownJunction 0 222.54 132.22 18.60 12.92 17.47 19.14 27.37 79 I17 Intron 0 29.89 27.03 1.58 0.46 0.54 1.82 2.04 80 I17_AR1 ActiveIntronRegion 0 31.14 27.81 1.79 0.51 0.58 1.93 2.23 81 I17_SR1 SilentIntronRegion 0 26.87 25.31 1.00 0.31 0.41 1.53 1.52 82 E18_Aa NovelBoundary 1 45.88 30.47 0.00 0.00 0.92 6.97 1.45 83 ER18a ExonRegion 0 214.54 140.81 15.75 11.48 13.55 24.69 32.93 84 E18a_E19a KnownJunction 0 211.09 96.97 12.26 13.33 17.15 18.81 23.49 85 ER19a ExonRegion 1 270.76 107.84 16.53 9.00 9.97 25.91 21.85