Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CHORDC1	Gene	0	166.14	227.67	357.94	347.05	286.85	293.65	46.27
2	320585	Transcript	0	181.10	254.30	379.09	397.82	324.55	319.58	46.97
3	ER1a	ExonRegion	0	59.82	171.37	110.75	244.47	164.83	153.24	22.96
4	E1a_E2a	KnownJunction	0	26.37	215.16	55.79	249.05	96.45	182.56	9.49
5	ER2a	ExonRegion	0	107.21	266.59	225.39	394.41	142.65	279.33	42.34
6	E2a_E3a	KnownJunction	0	186.11	231.08	355.23	426.44	214.94	301.58	61.83
7	E2a_E4a	NovelJunction	1	0.00	0.00	0.89	10.51	0.00	9.33	0.00
8	E2a_E5a	NovelJunction	0	0.92	1.23	4.68	10.51	0.00	10.53	0.00
9	E2a_E6a	NovelJunction	1	0.70	0.00	2.37	12.95	0.00	15.09	0.00
10	ER3a	ExonRegion	0	238.79	307.42	467.26	495.59	440.43	427.70	61.55
11	E3a_E4a	KnownJunction	0	189.75	309.03	415.58	492.73	586.60	477.38	51.05
12	ER4a	ExonRegion	0	153.56	292.97	365.70	468.20	254.35	428.38	44.79
13	E4a_E5a	KnownJunction	0	160.19	214.59	396.82	347.61	298.10	295.79	42.94
14	I4	Intron	0	23.43	27.63	30.26	18.56	13.54	18.55	9.50
15	I4_AR1	ActiveIntronRegion	0	34.72	44.31	44.02	35.43	21.96	20.11	14.73
16	I4_SR1	SilentIntronRegion	0	28.31	41.74	36.04	29.44	17.96	19.70	15.07
17	I4_AR3	ActiveIntronRegion	0	22.88	30.26	33.00	12.56	14.26	26.63	10.10
18	E5_Aa	NovelBoundary	1	12.83	19.52	46.93	13.98	6.18	20.66	14.90
19	ER5a	ExonRegion	0	152.58	236.13	360.29	373.29	267.76	319.70	39.41
20	E5a_E6a	KnownJunction	0	129.45	214.95	308.88	312.01	235.16	273.33	33.25
21	ER6a	ExonRegion	0	175.61	166.79	382.92	308.11	278.53	252.16	28.92
22	E6a_E7a	KnownJunction	1	193.50	118.30	400.79	311.28	279.82	228.79	21.05
23	ER7a	ExonRegion	0	246.22	224.32	491.46	421.51	368.04	335.66	49.87
24	E7a_E8a	KnownJunction	0	275.23	268.86	507.62	426.90	378.83	346.84	62.06
25	E7a_E9a	NovelJunction	1	2.22	2.63	5.53	18.48	0.90	8.60	0.00
26	ER8a	ExonRegion	0	309.29	286.96	568.77	443.11	397.04	375.81	55.52
27	E8a_E9a	KnownJunction	0	228.67	253.73	433.67	340.56	384.45	239.64	43.34
28	ER9a	ExonRegion	0	212.91	285.04	418.18	383.76	404.10	331.69	63.51
29	E9a_E10a	KnownJunction	0	196.27	354.80	407.77	507.74	465.28	401.09	73.18
30	E9a_E11a	NovelJunction	0	2.72	9.88	0.55	8.61	0.00	14.98	0.67
31	ER10a	ExonRegion	0	214.24	374.06	495.41	569.90	457.59	414.48	69.44
32	E10a_E11a	KnownJunction	0	192.10	345.84	446.97	535.13	430.28	380.93	63.55
33	ER11a	ExonRegion	0	155.16	202.37	345.53	302.49	270.40	265.03	46.26
34	IG3	Intergenic	0	21.58	33.93	40.77	46.49	20.13	51.24	9.82
35	IG3_AR3	ActiveIntergenicRegion	0	16.52	25.43	32.20	31.73	15.87	37.59	5.36
36	IG3_SR2	SilentIntergenicRegion	0	20.83	18.05	31.59	29.46	11.63	33.47	5.42
37	IG3_AR2	ActiveIntergenicRegion	0	22.85	38.82	43.98	51.58	25.22	54.65	11.38
38	IG3_SR1	SilentIntergenicRegion	0	23.39	39.74	42.62	59.37	11.48	62.60	12.77
39	IG3_AR1	ActiveIntergenicRegion	0	21.62	35.73	54.09	58.87	8.92	90.24	12.85