Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 MRE11A Gene 0 45.98 9.59 54.26 4.59 102.95 7.82 19.38 2 323929 Transcript 1 83.55 8.20 49.05 1.68 32.07 9.57 13.44 3 323977 Transcript 0 14.65 2.65 14.32 2.63 31.96 4.13 5.05 4 407439 Transcript 0 0 0 0 0 0 0 0 5 393241 Transcript 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 1 43.32 5.31 29.26 2.23 31.70 5.79 8.50 7 E1_Da KnownBoundary 0 14.70 3.91 30.87 4.39 70.52 5.82 5.19 8 E1a_E2a KnownJunction 1 83.55 8.20 49.05 1.68 32.07 9.57 13.44 9 ER1b ExonRegion 0 21.68 3.68 22.01 2.63 51.63 3.87 6.25 10 E1b_E2a KnownJunction 0 7.63 1.63 6.62 2.63 12.29 4.40 3.84 11 ER2a ExonRegion 1 87.12 12.41 72.95 6.25 82.27 20.33 17.18 12 E2a_E3a KnownJunction 1 166.92 13.29 120.50 13.03 162.15 30.50 31.07 13 ER2b ExonRegion 1 153.44 14.83 118.33 11.35 173.48 30.07 31.21 14 ER3a ExonRegion 1 99.06 23.68 98.73 10.65 133.66 18.39 21.27 15 E3a_E4a KnownJunction 0 85.55 29.40 97.55 8.29 134.88 11.12 24.46 16 ER4a ExonRegion 0 79.35 22.94 106.05 10.28 127.38 10.84 26.60 17 E4a_E5a KnownJunction 0 84.52 12.16 99.87 14.74 140.37 10.08 21.47 18 ER5a ExonRegion 0 86.66 17.41 103.01 10.76 145.26 11.80 32.73 19 E5a_E6a KnownJunction 0 59.03 17.02 91.50 15.14 160.91 17.18 33.02 20 ER6a ExonRegion 0 70.79 17.39 99.07 15.10 162.77 12.63 38.96 21 E6a_E7a KnownJunction 0 67.99 17.00 123.84 13.52 180.73 16.96 40.97 22 ER7a ExonRegion 0 62.92 13.26 98.30 8.44 158.89 10.16 36.06 23 E7a_E8a KnownJunction 0 53.39 8.64 54.29 2.71 127.55 7.34 28.65 24 I7 Intron 0 13.17 1.31 20.30 0.48 2.62 0.99 4.45 25 I7_SR2 SilentIntronRegion 0 16.63 1.46 26.62 0.71 2.85 1.40 5.12 26 E8_Aa NovelBoundary 1 29.07 2.50 42.09 1.44 4.15 1.21 4.07 27 ER8a ExonRegion 0 65.31 15.81 90.33 8.60 149.64 10.28 26.82 28 E8a_E9a KnownJunction 0 80.50 21.10 86.22 12.73 138.55 5.92 25.80 29 ER9a ExonRegion 0 72.93 22.97 94.30 10.56 138.58 10.86 29.82 30 E9a_E10a KnownJunction 0 67.49 20.02 104.92 16.61 111.71 15.92 37.02 31 ER10a ExonRegion 0 64.85 13.45 88.96 9.25 126.26 10.40 33.02 32 E10a_E11a KnownJunction 0 54.21 11.77 70.57 7.15 128.34 5.31 23.58 33 ER11a ExonRegion 0 68.28 13.49 76.28 8.01 130.18 7.27 28.25 34 E11a_E12a KnownJunction 0 65.81 14.53 61.36 4.80 148.62 9.67 33.69 35 ER12a ExonRegion 0 78.75 20.21 79.90 3.98 158.61 10.40 32.67 36 E12a_E13a KnownJunction 0 100.64 12.90 80.96 5.88 157.29 11.85 26.58 37 ER13a ExonRegion 0 76.43 15.53 81.56 8.38 172.00 12.03 36.63 38 E13a_E14a KnownJunction 0 96.89 14.87 99.57 7.78 182.95 11.66 41.27 39 ER14a ExonRegion 0 70.87 20.86 80.32 6.51 161.37 16.99 34.49 40 E14a_E15a KnownJunction 0 61.57 17.86 48.89 7.50 184.15 16.05 30.57 41 ER15a ExonRegion 0 56.63 18.77 57.95 8.76 159.67 20.16 32.08 42 E15a_E16a KnownJunction 0 37.30 12.66 55.10 9.64 147.54 23.32 22.69 43 E15a_E17a KnownJunction 0 3.57 2.94 4.48 1.41 10.07 0.00 0.77 44 ER16a ExonRegion 0 44.50 13.00 55.07 3.52 157.41 15.37 26.14 45 E16a_E17a KnownJunction 0 36.83 9.83 44.36 3.22 171.67 15.79 33.58 46 ER17a ExonRegion 0 48.24 12.70 62.62 4.37 154.70 16.58 35.70 47 E17a_E18a KnownJunction 0 54.04 14.71 67.11 2.76 130.69 13.19 31.94 48 ER18a ExonRegion 0 65.33 19.54 90.60 3.03 158.95 15.69 34.58 49 E18a_E19a KnownJunction 0 70.43 18.78 95.52 6.31 142.05 20.18 30.17 50 ER19a ExonRegion 0 61.01 22.01 88.09 6.61 148.81 17.03 37.97 51 E19a_E20a KnownJunction 0 53.56 20.15 88.31 9.43 163.56 15.36 37.25 52 ER20a ExonRegion 0 72.99 10.35 96.13 4.22 139.68 12.69 26.84 53 E20_Da KnownBoundary 0 28.76 4.26 42.49 0.00 94.29 3.94 11.09 54 ER20b ExonRegion 0 22.05 2.92 24.75 1.41 65.87 2.46 9.69 55 IG22_SR3 SilentIntergenicRegion 0 1.68 0.00 1.19 1.60 28.09 0.00 0.00 56 IG22_AR8 ActiveIntergenicRegion 0 36.62 6.27 28.72 3.74 150.69 5.73 15.30 57 IG22_AR5 ActiveIntergenicRegion 0 0.00 0.61 1.35 0.00 20.65 0.00 3.79 58 IG22_AR4 ActiveIntergenicRegion 0 0.57 4.35 3.17 0.00 89.94 0.00 5.33 59 IG22_AR3 ActiveIntergenicRegion 0 0.77 4.86 3.39 0.00 92.32 0.00 5.40 60 IG22_AR2 ActiveIntergenicRegion 0 0.77 4.86 2.94 0.00 62.43 0.00 5.40