Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 PCNXL3 Gene 0 76.96 92.19 97.94 92.32 83.64 49.31 137.06 2 355703 Transcript 0 85.32 95.12 107.26 94.74 92.15 46.75 147.89 3 ER1a ExonRegion 0 18.32 41.18 26.63 35.56 25.89 20.78 33.86 4 E1a_E2a KnownJunction 0 55.56 88.85 85.83 76.69 58.44 35.86 90.95 5 ER2a ExonRegion 0 55.39 108.10 83.56 89.97 41.87 42.81 97.33 6 E2a_E3a KnownJunction 0 79.34 113.65 115.03 84.12 60.81 49.85 113.28 7 E3_Aa NovelBoundary 1 35.43 0.00 47.09 1.38 0.99 0.00 0.76 8 ER3a ExonRegion 0 73.81 105.11 105.01 81.19 61.60 46.48 107.33 9 E3a_E4a KnownJunction 0 60.38 79.21 70.40 76.80 39.90 36.13 70.18 10 ER4a ExonRegion 0 51.85 89.44 79.12 69.95 38.89 42.76 72.92 11 E4a_E5a KnownJunction 0 41.93 65.63 71.94 53.88 34.97 39.99 56.19 12 ER5a ExonRegion 0 67.53 77.71 98.27 77.99 41.88 52.68 97.27 13 E5a_E6a KnownJunction 0 92.98 73.48 132.68 86.31 47.74 51.43 105.26 14 ER6a ExonRegion 0 35.25 65.27 56.49 60.71 24.20 30.34 62.95 15 E6a_E7a KnownJunction 0 28.57 37.78 25.18 48.55 29.23 12.60 52.21 16 ER7a ExonRegion 0 27.68 51.71 31.09 40.26 22.07 13.10 48.28 17 E7a_E8a KnownJunction 0 28.22 51.26 30.41 54.53 9.73 14.10 51.98 18 ER8a ExonRegion 0 46.42 67.94 62.14 55.90 38.00 21.44 82.53 19 E8a_E9a KnownJunction 1 45.20 55.33 59.68 58.35 51.71 13.16 82.02 20 E8a_E10a NovelJunction 0 3.24 11.82 3.32 11.89 0.00 14.50 8.40 21 ER9a ExonRegion 1 40.13 72.96 61.71 61.77 39.85 15.96 84.98 22 E9a_E10a KnownJunction 1 45.11 71.85 69.88 64.53 45.58 15.97 100.35 23 ER10a ExonRegion 0 27.83 59.76 45.22 59.20 40.71 29.45 76.83 24 E10a_E11a KnownJunction 0 26.09 24.35 38.05 25.09 28.12 7.18 59.69 25 E11_Aa NovelBoundary 0 36.40 45.45 40.27 49.71 32.62 43.44 73.39 26 ER11a ExonRegion 0 43.45 55.05 60.02 71.73 59.15 30.79 96.93 27 E11a_E12a KnownJunction 0 44.76 70.12 76.32 72.22 43.62 51.16 120.97 28 ER12a ExonRegion 0 87.08 101.57 127.22 102.67 101.56 54.56 186.74 29 E12a_E13a KnownJunction 0 73.05 96.00 86.05 95.98 124.37 49.02 175.50 30 ER13a ExonRegion 0 82.87 106.91 100.62 106.22 106.90 51.71 188.46 31 E13a_E14a KnownJunction 0 80.41 78.66 101.90 77.43 83.47 38.65 136.78 32 ER14a ExonRegion 0 100.35 133.99 129.57 99.82 101.12 62.97 201.26 33 E14a_E15a KnownJunction 0 99.39 127.94 103.73 116.57 114.43 63.97 166.09 34 ER15a ExonRegion 0 91.40 122.38 107.90 91.13 80.72 57.33 166.82 35 E15a_E16a KnownJunction 0 77.69 103.96 109.79 78.78 64.27 56.92 190.13 36 ER16a ExonRegion 0 56.53 103.98 79.64 84.59 58.65 47.07 122.92 37 E16a_E17a KnownJunction 0 63.99 100.99 95.15 64.83 55.93 40.17 122.68 38 ER17a ExonRegion 0 74.25 102.21 111.33 88.83 82.80 43.10 171.98 39 E17a_E18a KnownJunction 1 49.85 105.87 81.48 75.99 66.81 19.16 108.73 40 ER18a ExonRegion 0 61.00 72.95 94.60 89.22 60.91 32.81 125.12 41 E18a_E19a KnownJunction 0 73.07 69.99 105.10 84.06 95.78 37.60 154.06 42 ER19a ExonRegion 0 72.76 97.03 98.15 94.43 76.74 43.11 140.25 43 E19a_E20a KnownJunction 0 82.98 97.55 126.85 84.23 51.85 43.79 128.80 44 ER20a ExonRegion 0 68.02 90.66 108.91 110.29 97.13 54.71 174.89 45 E20a_E21a KnownJunction 1 97.27 66.39 119.92 82.00 210.68 16.19 206.23 46 Ix Intron 0 19.91 10.73 14.97 12.03 8.23 4.37 12.44 47 Ix_AR1 ActiveIntronRegion 0 20.05 8.99 15.03 10.68 8.47 3.40 12.53 48 Ix_SR1 SilentIntronRegion 0 24.16 25.26 16.60 26.58 8.15 13.89 13.36 49 E21_Aa NovelBoundary 0 30.09 28.01 30.06 33.67 15.84 18.63 30.01 50 ER21a ExonRegion 0 128.93 101.08 159.27 120.44 116.80 37.30 200.86 51 E21a_E22a KnownJunction 1 95.48 75.24 118.63 123.21 113.54 29.69 187.10 52 ER22a ExonRegion 0 146.53 113.06 171.61 143.69 164.13 61.44 254.64 53 E22a_E23a KnownJunction 0 111.77 143.60 159.50 148.03 170.98 88.47 275.03 54 ER23a ExonRegion 0 137.73 152.96 178.30 147.78 157.29 67.89 273.73 55 E23a_E24a KnownJunction 0 155.00 163.28 187.85 139.52 129.03 60.00 288.31 56 ER24a ExonRegion 0 113.14 148.43 146.00 140.80 125.52 57.90 237.16 57 E24a_E25a KnownJunction 0 107.33 119.67 161.88 134.34 184.49 42.72 221.65 58 E24a_E26a NovelJunction 0 3.72 6.41 6.09 7.29 0.00 9.86 5.73 59 ER25a ExonRegion 0 103.24 129.64 165.60 122.58 155.33 52.03 246.39 60 E25a_E26a KnownJunction 0 97.09 143.94 154.06 122.42 139.24 68.31 250.89 61 ER26a ExonRegion 0 89.49 137.19 136.08 128.26 146.64 69.72 234.57 62 E26a_E27a KnownJunction 0 100.19 134.54 124.04 120.42 156.34 70.80 230.75 63 ER27a ExonRegion 0 108.03 125.63 148.89 134.04 151.78 79.44 251.25 64 E27a_E28a KnownJunction 0 106.23 100.86 148.19 129.77 121.03 59.15 209.78 65 ER28a ExonRegion 0 130.55 90.37 154.70 119.15 148.55 54.01 178.78 66 E28a_E29a KnownJunction 1 142.83 70.57 126.73 96.36 78.89 35.16 74.72 67 ER29a ExonRegion 0 229.71 107.54 183.25 132.79 188.24 53.94 184.35 68 E29a_E30a KnownJunction 0 331.21 154.71 287.42 175.55 230.46 89.97 245.44 69 E30_Aa NovelBoundary 1 27.51 2.15 4.43 0.00 2.12 0.00 7.04 70 ER30a ExonRegion 0 296.86 164.38 250.24 172.27 259.72 108.98 302.11 71 E30a_E31a KnownJunction 0 172.37 165.54 179.23 132.18 188.83 100.90 207.32 72 E31_Aa NovelBoundary 1 58.70 0.00 53.96 1.68 0.00 0.00 1.58 73 ER31a ExonRegion 0 106.68 127.66 111.57 134.88 137.85 66.32 174.09 74 E31_Da NovelBoundary 0 23.82 8.49 12.49 15.41 3.53 11.42 22.46 75 E31a_E32a KnownJunction 0 55.79 90.93 78.49 109.50 83.89 44.49 119.80 76 ER32a ExonRegion 0 70.92 94.86 94.76 98.02 111.54 50.60 149.28 77 E32a_E33a KnownJunction 0 45.08 46.21 56.07 61.66 48.00 35.43 94.36 78 ER33a ExonRegion 0 73.00 91.20 93.55 88.55 103.38 51.79 134.11 79 E33a_E34a KnownJunction 0 44.08 67.49 53.17 92.19 67.73 27.90 81.49 80 ER34a ExonRegion 0 41.60 52.16 42.40 64.65 36.76 38.95 57.36 81 E34a_E35a KnownJunction 0 59.37 61.92 79.83 85.85 57.19 63.76 96.39 82 ER35a ExonRegion 0 59.07 84.07 77.35 85.89 67.39 71.94 111.15