Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 PAAF1 Gene 0 19.77 6.66 16.24 3.56 207.03 6.37 88.47 2 310571 Transcript 0 9.21 2.35 8.34 2.22 89.72 0.68 46.66 3 376384 Transcript 0 0.45 1.76 0.00 0.00 2.34 0.98 0.44 4 IG28 Intergenic 0 2.33 0.65 0.36 4.67 14.18 0.66 1.81 5 IG28_AR1 ActiveIntergenicRegion 0 2.37 0.66 0.37 4.74 14.39 0.67 1.83 6 ER1a ExonRegion 0 12.70 2.14 12.17 1.51 178.14 0.54 59.47 7 E1a_E2a KnownJunction 0 19.84 5.65 19.36 5.74 137.60 1.66 96.87 8 ER2a ExonRegion 0 10.33 3.94 9.33 2.34 73.83 1.20 55.86 9 E2a_E4a KnownJunction 1 2.47 0.00 0.79 1.52 44.38 0.00 18.33 10 E3_Aa NovelBoundary 0 38.60 35.57 39.23 48.41 7.58 40.71 36.03 11 ER3a ExonRegion 0 0.21 1.05 0.00 0.00 1.71 0.33 0.00 12 E3_Da NovelBoundary 0 284.90 201.40 286.86 182.65 244.24 161.12 250.69 13 E3a_E4a KnownJunction 0 0.68 2.47 0.00 0.00 2.97 1.63 0.89 14 ER4a ExonRegion 0 12.47 7.59 13.56 6.26 79.72 5.39 59.34 15 E4a_E5a KnownJunction 0 30.94 9.77 38.00 7.21 152.13 10.37 138.60 16 ER5a ExonRegion 0 25.98 6.48 29.81 7.55 303.87 9.29 100.49 17 E5a_E6a KnownJunction 0 23.72 5.46 22.27 5.99 182.46 14.87 64.35 18 ER6a ExonRegion 0 19.24 7.45 19.29 4.16 192.87 10.55 84.26 19 E6a_E7a KnownJunction 0 20.24 6.88 22.63 5.91 129.37 11.82 76.72 20 ER7a ExonRegion 0 19.66 7.69 20.90 3.04 144.86 9.17 78.59 21 E7a_E8a KnownJunction 0 10.60 6.44 13.97 2.52 141.38 8.95 84.71 22 ER8a ExonRegion 0 12.15 3.92 12.35 3.66 174.97 3.45 68.79 23 E8a_E9a KnownJunction 0 20.31 5.23 10.38 5.04 228.73 2.68 82.59 24 ER9a ExonRegion 0 28.89 5.51 17.44 4.26 243.99 8.25 80.60 25 E9a_E10a KnownJunction 0 22.05 10.43 18.14 2.98 230.83 3.22 83.04 26 ER10a ExonRegion 0 24.48 8.39 15.12 2.57 235.44 5.90 87.69 27 E10a_E11a KnownJunction 0 35.50 8.20 16.74 5.55 236.96 3.35 94.32 28 ER11a ExonRegion 0 29.59 8.18 15.44 3.98 267.79 7.30 112.08 29 E11a_E12a KnownJunction 0 16.67 5.78 13.05 4.42 213.65 9.51 116.30 30 ER12a ExonRegion 0 20.28 6.25 16.73 5.20 237.98 9.20 120.75 31 E12a_E13a KnownJunction 0 18.96 6.20 12.27 1.68 266.17 10.37 125.89 32 ER13a ExonRegion 0 22.87 8.41 16.73 2.69 262.33 6.61 114.78 33 ER13b ExonRegion 0 0.68 0.00 0.08 0.00 14.67 0.00 2.77