Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SSH3	Gene	0	83.18	57.01	25.15	11.43	44.10	14.95	189.54
2	308127	Transcript	0	2.33	5.43	0.70	2.05	5.53	0.79	7.54
3	308298	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	402540	Transcript	0	4.82	4.75	1.35	0.33	0.88	3.62	7.23
5	376757	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	2.33	5.43	0.70	2.05	5.53	0.79	7.54
7	E1_Ab	KnownBoundary	0	10.90	12.08	1.21	3.14	13.56	1.39	19.83
8	ER1b	ExonRegion	0	23.08	18.99	6.76	2.02	8.31	2.03	52.92
9	E1a_E2a	KnownJunction	0	0.00	5.31	0.00	0.00	0.00	3.11	7.45
10	E1a_E2b	KnownJunction	0	1.82	7.20	0.88	1.68	3.50	3.99	10.66
11	ER2a	ExonRegion	0	1.58	4.96	0.43	0.02	0.57	4.19	3.49
12	E2_Ab	KnownBoundary	0	5.97	8.98	1.57	2.68	0.95	7.32	10.09
13	ER2b	ExonRegion	0	15.22	32.11	6.52	2.49	11.47	6.10	47.75
14	E2a_E3a	KnownJunction	1	28.21	45.87	14.00	1.38	24.85	4.15	99.83
15	E2a_E3b	KnownJunction	0	0.00	1.37	0.00	0.00	1.01	0.00	0.00
16	ER3a	ExonRegion	0	27.36	42.76	11.79	5.74	22.51	6.13	93.36
17	ER3b	ExonRegion	1	55.21	57.98	20.30	4.99	29.30	7.51	132.36
18	E3_Ac	KnownBoundary	0	63.37	53.17	25.00	5.80	29.97	7.24	147.05
19	ER3c	ExonRegion	1	73.90	59.32	23.51	4.30	32.45	9.76	147.81
20	E3_Da	KnownBoundary	0	49.99	46.37	13.29	4.52	32.80	8.50	123.09
21	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER3d	ExonRegion	0	58.94	58.71	18.01	6.20	31.28	16.26	135.44
23	E3b_E5a	KnownJunction	1	75.41	69.17	30.45	2.87	42.00	9.57	153.70
24	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	E4a_E11b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER5a	ExonRegion	1	103.12	71.31	29.07	6.78	42.56	21.40	195.27
27	E5_Da	KnownBoundary	0	23.72	7.15	8.41	1.16	0.92	12.22	27.14
28	E5a_E5b	KnownJunction	0	95.45	67.10	30.19	7.42	44.35	16.59	181.85
29	ER5b	ExonRegion	0	17.69	7.37	4.99	1.31	1.94	7.17	17.99
30	E5_Ab	KnownBoundary	0	10.50	8.22	2.89	1.22	1.18	6.54	15.74
31	ER5c	ExonRegion	1	91.14	66.06	34.83	7.10	46.64	27.01	190.75
32	E5b_E6a	KnownJunction	0	92.88	59.19	32.00	7.83	45.21	19.14	204.18
33	ER6a	ExonRegion	0	95.76	66.80	32.84	9.39	50.85	16.77	244.07
34	E6a_E7a	KnownJunction	0	87.37	76.08	33.68	8.40	38.52	17.55	195.15
35	E6a_E8a	NovelJunction	1	3.97	9.98	4.12	0.00	8.99	8.09	22.79
36	ER7a	ExonRegion	0	60.06	59.50	21.18	8.14	33.37	11.34	148.46
37	E7a_E8a	KnownJunction	1	63.35	53.62	32.68	7.48	20.59	5.09	161.37
38	ER8a	ExonRegion	0	86.19	65.68	29.18	17.46	50.02	10.89	204.55
39	E8_Da	KnownBoundary	0	107.70	75.87	29.55	22.21	67.91	16.40	238.86
40	E8a_E13b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER8b	ExonRegion	0	102.83	70.13	27.53	20.29	53.47	15.19	227.50
42	E8b_E9a	KnownJunction	0	99.62	70.75	25.28	15.63	44.28	15.25	200.97
43	ER9a	ExonRegion	0	101.25	75.19	29.42	17.38	55.08	18.37	245.97
44	E9a_E10a	KnownJunction	0	104.38	56.98	25.26	19.75	55.49	10.00	235.78
45	ER10a	ExonRegion	0	104.54	64.80	32.79	14.33	66.36	13.02	263.18
46	E10a_E11a	KnownJunction	0	87.86	60.27	31.76	10.89	87.09	13.83	232.57
47	E11_Ab	NovelBoundary	0	95.27	62.13	35.34	10.70	102.17	16.24	225.96
48	ER11a	ExonRegion	0	102.86	68.09	38.81	12.41	106.05	15.51	258.57
49	ER11b	ExonRegion	0	96.10	77.70	32.21	15.56	68.54	13.32	270.77
50	E11a_E12a	KnownJunction	0	76.96	74.56	21.04	10.73	69.69	13.19	235.94
51	ER12a	ExonRegion	0	88.14	67.52	29.24	14.93	56.11	20.45	230.73
52	E12a_E13a	KnownJunction	1	64.32	46.92	20.32	5.99	26.67	20.07	156.94
53	ER13a	ExonRegion	0	104.32	62.39	38.63	12.42	49.96	21.86	198.91
54	E13_Ab	KnownBoundary	0	119.23	65.57	47.74	18.96	44.22	26.02	247.07
55	ER13b	ExonRegion	0	109.86	76.02	48.79	20.31	48.78	18.71	254.55
56	E13a_E14a	KnownJunction	0	105.05	80.65	49.39	17.56	54.77	18.52	241.89
57	ER14a	ExonRegion	0	103.49	60.40	26.69	15.06	52.85	16.00	232.31
58	ER14b	ExonRegion	0	1.54	0.20	1.35	1.25	4.18	0.00	7.87
59	IG27	Intergenic	0	7.55	7.58	2.72	3.09	1.85	4.57	27.48
60	IG27_AR1	ActiveIntergenicRegion	0	3.01	7.40	1.29	2.08	0.55	3.68	11.06
61	IG27_SR2	SilentIntergenicRegion	0	6.06	3.93	1.29	1.28	0.30	3.52	37.94
62	IG27_AR2	ActiveIntergenicRegion	0	11.16	17.64	6.77	5.55	5.04	7.99	53.43
63	IG27_SR3	SilentIntergenicRegion	0	11.55	12.53	5.54	3.74	3.21	4.29	35.52
64	IG27_SR4	SilentIntergenicRegion	0	9.76	8.95	3.02	4.52	2.48	7.81	33.35
65	IG27_AR5	ActiveIntergenicRegion	0	12.71	10.05	2.62	9.15	3.73	5.73	37.22
66	IG27_AR6	ActiveIntergenicRegion	0	10.63	12.07	2.81	7.76	4.29	10.87	36.35