Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SF1	Gene	0	433.32	1277.32	663.72	1299.90	523.26	1054.03	597.38
2	334944	Transcript	1	5.24	32.94	8.90	1.11	6.06	16.70	9.27
3	377390	Transcript	0	144.66	339.61	183.78	324.10	131.82	290.87	164.81
4	377394	Transcript	0	32.98	140.61	28.85	145.94	18.26	104.20	54.95
5	227503	Transcript	0	0	0	0	0	0	0	0
6	377387	Transcript	0	14.18	37.76	25.76	21.94	15.23	16.36	15.56
7	ER1a	ExonRegion	0	1.24	89.64	3.18	41.04	3.63	15.99	6.78
8	ER1b	ExonRegion	0	3.90	178.41	4.18	80.29	3.43	47.27	9.86
9	E1_Ac	KnownBoundary	0	13.25	152.09	12.39	107.88	7.28	99.51	30.37
10	ER1c	ExonRegion	0	53.20	317.42	84.82	329.04	99.14	294.38	71.74
11	E1_Ad	KnownBoundary	0	132.97	541.87	211.40	631.52	83.01	528.89	194.84
12	ER1d	ExonRegion	0	121.70	885.59	201.89	807.47	122.43	745.38	251.47
13	E1_Da	KnownBoundary	0	0.70	32.39	0.89	13.65	0.00	12.41	3.71
14	E1a_E2a	KnownJunction	0	165.76	1496.13	304.87	1413.56	127.44	1302.76	473.04
15	ER1e	ExonRegion	0	3.24	16.30	4.59	6.68	3.51	5.99	2.78
16	E1b_E2a	KnownJunction	0	25.12	59.22	46.92	37.20	26.95	26.72	28.33
17	ER2a	ExonRegion	0	334.16	2351.81	681.69	2002.83	415.17	1792.03	654.20
18	E2a_E3a	KnownJunction	0	430.08	2803.98	830.42	2490.11	491.46	2236.47	1027.13
19	E2a_E4a	NovelJunction	1	63.17	85.99	81.19	162.65	22.41	106.50	4.76
20	I2	Intron	0	137.53	90.75	124.66	22.00	46.59	13.20	43.43
21	I2_AR1	ActiveIntronRegion	0	139.42	122.58	146.24	38.62	51.52	21.64	55.68
22	I2_SR1	SilentIntronRegion	0	111.41	89.06	117.57	15.39	36.69	11.48	40.65
23	I2_AR3	ActiveIntronRegion	0	127.95	99.14	114.36	27.28	47.42	14.25	42.47
24	I2_SR2	SilentIntronRegion	0	116.06	79.54	109.65	18.92	43.71	7.80	43.46
25	I2_AR4	ActiveIntronRegion	0	178.47	75.62	134.08	16.27	53.63	12.15	39.52
26	E3_Aa	NovelBoundary	1	269.39	131.78	193.05	36.57	67.31	16.24	79.97
27	ER3a	ExonRegion	0	411.81	2703.86	869.15	2445.23	613.93	2097.50	1002.27
28	E3_Da	NovelBoundary	1	186.54	136.38	108.96	71.98	44.58	28.73	38.49
29	E3a_E4a	KnownJunction	0	282.83	2077.36	691.96	1979.22	439.46	1605.95	726.49
30	I3	Intron	0	176.89	124.46	147.39	31.00	65.04	23.05	54.82
31	I3_AR1	ActiveIntronRegion	0	177.00	124.54	147.48	31.02	65.08	23.06	54.85
32	E4_Aa	NovelBoundary	1	249.20	174.44	374.40	54.56	48.32	43.92	61.74
33	ER4a	ExonRegion	0	564.41	2426.13	1100.68	2420.04	741.16	1897.32	988.81
34	E4a_E5a	KnownJunction	0	603.51	2559.76	1174.34	2476.61	899.06	2020.41	984.17
35	ER5a	ExonRegion	0	757.90	2709.71	1395.26	2620.49	1034.20	2145.00	1131.60
36	E5a_E6a	KnownJunction	0	815.95	2620.92	1401.60	2571.70	1000.59	2027.67	1080.42
37	ER6a	ExonRegion	0	1395.85	3486.36	2078.41	3457.53	1783.89	2568.90	1572.18
38	E6a_E7a	KnownJunction	0	1937.60	4159.00	2555.82	4323.87	2046.08	3126.19	1771.91
39	ER7a	ExonRegion	0	1989.89	3882.19	2869.06	4127.66	2249.01	2912.70	1995.86
40	E7a_E8a	KnownJunction	0	1800.61	3242.11	2486.00	3616.17	2978.08	2616.46	1844.47
41	ER8a	ExonRegion	0	1592.10	3228.69	2297.33	3305.60	1956.36	2432.80	1882.99
42	E8a_E9a	KnownJunction	0	1157.55	3121.07	1816.57	3175.05	1500.28	2223.79	1607.07
43	ER9a	ExonRegion	0	725.13	2669.82	1198.45	2580.22	1086.48	1893.83	1424.27
44	E9a_E10a	KnownJunction	0	590.12	1953.68	887.17	2325.93	707.26	1616.29	1327.88
45	ER10a	ExonRegion	0	339.77	1483.28	465.23	1648.63	449.18	1178.38	782.06
46	E10a_E11a	KnownJunction	0	138.29	756.49	195.62	844.70	116.97	624.60	303.84
47	E10b_E11a	KnownJunction	0	34.65	134.83	27.72	135.70	18.10	99.29	53.24
48	ER10b	ExonRegion	0	31.31	146.39	29.97	156.18	18.42	109.11	56.67
49	ER11a	ExonRegion	0	176.00	913.86	225.95	1074.61	203.37	782.10	418.84
50	E11a_E12a	KnownJunction	0	163.13	944.17	211.39	1141.62	264.90	775.34	457.13
51	ER12a	ExonRegion	0	98.53	652.27	109.72	754.59	176.03	576.54	261.20
52	E12a_E13a	KnownJunction	1	60.77	542.35	49.06	436.44	58.60	380.82	133.15
53	E12a_E13b	KnownJunction	0	64.97	241.17	115.15	370.31	38.15	273.01	77.23
54	ER13a	ExonRegion	0	42.53	409.31	40.54	317.46	50.71	255.16	75.04
55	E13_Da	KnownBoundary	0	118.55	185.45	92.69	139.55	51.48	146.81	53.69
56	E13a_E13b	KnownJunction	0	5.24	32.94	8.90	1.11	6.06	16.70	9.27
57	ER13b	ExonRegion	0	144.66	339.61	183.78	324.10	131.82	290.87	164.81
58	E13_Ab	KnownBoundary	0	195.24	456.94	170.78	483.96	149.61	405.78	183.93
59	ER13c	ExonRegion	0	499.08	1041.69	741.37	1185.81	521.90	1148.27	570.77
60	ER13d	ExonRegion	0	10.95	16.70	16.26	17.15	13.57	27.58	11.13
61	IG29	Intergenic	0	8.41	11.45	7.78	9.43	0.96	8.85	3.82
62	IG29_SR2	SilentIntergenicRegion	0	9.45	18.66	9.98	11.76	1.50	11.27	6.39
63	IG29_AR2	ActiveIntergenicRegion	0	14.92	13.13	6.79	13.06	1.92	12.31	7.26
64	IG29_AR1	ActiveIntergenicRegion	0	13.57	15.18	9.92	9.78	1.90	13.30	5.57
65	IG29_SR1	SilentIntergenicRegion	0	7.48	9.57	7.13	8.87	0.72	7.80	3.04