Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	INPPL1	Gene	0	158.42	157.21	101.44	173.49	146.46	81.19	120.62
2	298229	Transcript	0	210.39	186.98	137.30	209.22	194.36	93.86	153.99
3	320683	Transcript	0	72.83	72.80	23.71	83.60	17.57	46.63	43.47
4	IG10_AR3	ActiveIntergenicRegion	0	3.26	0.86	1.73	8.73	2.14	1.36	0.59
5	ER1a	ExonRegion	0	15.88	36.94	5.71	36.07	11.87	16.27	10.12
6	E1a_E2a	KnownJunction	0	66.59	137.56	31.08	141.63	56.94	67.48	49.40
7	ER2a	ExonRegion	0	121.30	161.46	64.25	169.35	83.71	82.12	81.28
8	E2a_E3a	KnownJunction	0	146.57	161.70	88.45	188.07	76.19	84.63	106.98
9	ER3a	ExonRegion	0	129.87	160.87	79.06	144.71	83.90	79.19	98.48
10	E3a_E4a	KnownJunction	0	135.24	140.50	76.55	108.12	162.43	64.96	83.35
11	ER4a	ExonRegion	0	112.70	122.43	73.02	137.51	109.91	68.88	85.73
12	E4a_E5a	KnownJunction	0	120.63	117.67	66.92	165.55	63.23	74.66	83.51
13	E5_Aa	NovelBoundary	1	47.97	60.69	25.36	22.32	31.37	16.70	33.88
14	ER5a	ExonRegion	0	133.88	168.51	81.12	177.33	106.69	70.71	105.93
15	E5a_E6a	KnownJunction	0	188.33	192.23	119.42	204.65	190.69	90.85	125.27
16	ER6a	ExonRegion	0	198.92	208.96	133.45	231.71	175.35	109.54	169.32
17	E6a_E7a	KnownJunction	0	138.59	180.69	88.18	198.71	117.85	113.60	134.14
18	ER7a	ExonRegion	0	147.19	210.79	111.35	204.14	156.40	92.26	122.40
19	E7_Da	NovelBoundary	0	46.06	18.78	29.36	21.84	11.20	8.84	45.36
20	E7a_E8a	KnownJunction	0	169.84	178.09	125.94	188.93	154.89	103.37	121.29
21	I7	Intron	1	20.67	13.46	15.20	18.23	5.29	10.88	28.96
22	I7_SR1	SilentIntronRegion	1	20.90	13.62	15.36	18.43	5.35	11.00	29.29
23	E8_Aa	NovelBoundary	0	24.65	12.45	19.86	10.89	5.99	7.66	34.81
24	ER8a	ExonRegion	0	154.80	174.40	116.14	213.63	198.93	98.88	149.61
25	E8a_E9a	KnownJunction	0	104.63	171.45	72.41	181.24	155.19	63.44	109.28
26	ER9a	ExonRegion	0	113.91	172.04	83.53	186.24	149.72	68.33	121.18
27	E9a_E10a	KnownJunction	0	121.64	179.99	95.09	175.69	138.87	60.35	136.97
28	ER10a	ExonRegion	0	148.71	192.27	102.87	211.76	165.97	92.90	144.82
29	E10a_E11a	KnownJunction	0	141.63	175.65	99.41	163.41	158.56	95.73	142.88
30	ER11a	ExonRegion	0	160.61	211.15	112.90	220.12	177.07	96.34	162.49
31	E11a_E12a	KnownJunction	0	199.63	196.06	129.43	204.32	204.73	94.92	150.51
32	ER12a	ExonRegion	0	180.68	188.73	128.26	221.33	177.54	93.54	154.34
33	E12a_E13a	KnownJunction	0	198.36	180.62	138.83	184.82	215.20	75.25	166.96
34	E12a_E14a	NovelJunction	0	4.57	7.36	2.33	18.12	2.35	11.87	1.56
35	ER13a	ExonRegion	0	187.67	210.45	148.96	199.79	218.32	88.78	181.36
36	E13a_E14a	KnownJunction	0	201.60	191.18	145.13	186.68	183.94	83.48	186.18
37	ER14a	ExonRegion	0	183.39	197.93	144.18	199.93	191.19	104.12	179.43
38	E14a_E15a	KnownJunction	0	138.91	152.85	126.21	206.65	210.73	96.37	129.04
39	ER15a	ExonRegion	0	154.93	190.91	142.37	228.07	187.33	101.99	155.37
40	E15a_E16a	KnownJunction	0	176.03	214.61	175.66	260.54	190.02	92.91	155.61
41	E16_Aa	NovelBoundary	1	70.36	0.00	66.39	0.00	0.00	0.00	0.86
42	ER16a	ExonRegion	0	298.01	233.59	212.29	292.51	287.81	112.28	205.08
43	E16_Da	NovelBoundary	1	158.40	2.44	105.48	1.60	0.85	1.18	0.89
44	E16a_E17a	KnownJunction	0	383.79	238.20	253.55	308.22	406.47	109.24	237.06
45	ER17a	ExonRegion	0	319.51	258.22	240.84	306.82	258.82	118.16	205.84
46	E17a_E18a	KnownJunction	0	345.73	261.51	265.87	278.28	351.12	124.57	208.61
47	E17a_E19a	NovelJunction	0	7.79	20.83	18.47	43.02	1.75	12.41	17.37
48	ER18a	ExonRegion	0	514.71	264.91	294.94	317.03	403.06	144.88	247.90
49	E18_Da	NovelBoundary	0	59.13	27.95	39.33	35.76	8.90	21.31	32.68
50	E18a_E19a	KnownJunction	0	465.35	246.90	264.95	313.28	439.00	111.49	243.88
51	I18	Intron	0	31.80	13.25	20.57	16.45	6.75	10.49	15.08
52	I18_AR1	ActiveIntronRegion	0	32.23	13.45	20.87	16.67	6.82	10.63	15.29
53	E19_Aa	NovelBoundary	0	72.87	30.58	35.35	53.04	10.17	15.25	26.67
54	ER19a	ExonRegion	0	473.46	301.61	270.71	322.42	391.02	131.69	254.77
55	E19a_E20a	KnownJunction	0	517.45	300.94	297.61	313.20	357.00	170.85	234.42
56	ER20a	ExonRegion	0	472.53	305.05	281.42	336.10	438.22	151.97	303.11
57	E20a_E21a	KnownJunction	0	521.83	242.83	263.42	302.55	407.41	139.60	252.10
58	ER21a	ExonRegion	0	497.24	266.67	263.56	313.39	412.21	152.91	303.38
59	E21a_E22a	KnownJunction	0	339.64	242.62	217.34	292.01	275.64	148.36	274.88
60	E21a_E23a	NovelJunction	1	0.98	0.00	4.01	13.57	0.00	4.98	0.00
61	ER22a	ExonRegion	0	278.75	229.82	180.72	274.50	269.30	133.66	251.47
62	E22a_E23a	KnownJunction	0	330.73	223.10	198.43	309.57	301.92	133.86	279.06
63	ER23a	ExonRegion	0	226.05	197.13	149.69	243.07	238.23	105.72	186.11
64	E23a_E24a	KnownJunction	0	115.41	149.33	93.88	168.32	58.67	77.61	100.74
65	ER24a	ExonRegion	0	92.89	132.76	74.12	131.52	102.67	57.31	98.11
66	E24a_E25a	KnownJunction	0	82.70	96.15	67.17	129.41	73.77	33.77	97.67
67	ER25a	ExonRegion	0	87.65	108.04	57.42	124.32	67.21	50.55	80.29
68	E25a_E26a	KnownJunction	0	82.98	90.58	57.85	93.79	53.97	44.49	69.42
69	ER26a	ExonRegion	0	114.80	140.02	63.28	150.29	97.37	75.07	95.21
70	E26_Ab	KnownBoundary	0	79.88	106.29	41.16	141.71	71.79	54.73	56.97
71	ER26b	ExonRegion	0	77.87	91.23	36.13	119.21	56.90	58.13	54.95
72	E26_Da	KnownBoundary	0	17.44	22.09	13.38	29.04	18.19	24.95	16.34
73	E26a_E26c	KnownJunction	0	72.83	72.80	23.71	83.60	17.57	46.63	43.47
74	E26_Ac	KnownBoundary	1	52.89	51.83	17.52	58.35	10.60	26.13	35.83
75	ER26c	ExonRegion	0	85.55	91.11	39.06	105.58	52.37	53.94	60.94
76	ER26d	ExonRegion	0	68.67	83.71	35.58	98.85	78.16	47.16	59.06
77	E26b_E27a	KnownJunction	0	48.75	105.66	27.71	85.80	58.37	59.82	44.08
78	E26b_E28a	NovelJunction	1	7.54	3.78	1.71	8.48	2.10	2.68	15.12
79	ER27a	ExonRegion	0	36.13	94.99	24.64	95.61	54.92	65.69	38.52
80	E27a_E28a	KnownJunction	0	64.62	115.17	48.74	120.07	86.17	91.47	62.71
81	ER28a	ExonRegion	0	110.39	142.81	73.86	149.91	122.64	94.09	111.46
82	E28_Da	KnownBoundary	0	128.45	152.95	70.77	194.89	147.72	107.36	129.86
83	ER28b	ExonRegion	0	111.37	110.04	63.16	121.85	84.46	66.97	68.20