Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FAM168A	Gene	0	64.59	66.91	24.46	32.39	29.63	44.25	54.23
2	64778	Transcript	0	4.11	7.15	0.50	2.91	0.57	5.80	8.46
3	356467	Transcript	0	89.39	77.50	33.76	46.00	13.44	40.98	88.32
4	ER1a	ExonRegion	0	15.19	18.20	4.35	7.36	7.74	6.71	10.85
5	E1a_E2a	KnownJunction	0	32.16	49.50	11.42	21.21	17.11	17.58	29.78
6	E1a_E3a	NovelJunction	1	0.88	7.78	0.00	0.00	0.00	3.00	0.00
7	ER2a	ExonRegion	0	63.70	77.03	21.42	29.43	29.50	25.86	45.07
8	E2a_E3a	KnownJunction	0	58.03	95.86	23.68	28.07	60.68	31.73	63.24
9	I2_AR2	ActiveIntronRegion	1	1.54	2.43	2.24	8.25	1.74	11.60	0.67
10	I2_AR3	ActiveIntronRegion	1	1.54	4.15	2.71	8.73	2.50	14.00	0.39
11	I2_AR4	ActiveIntronRegion	1	1.54	4.86	2.03	8.73	3.59	14.89	0.00
12	ER3a	ExonRegion	0	72.08	96.72	35.84	36.81	46.15	46.95	84.62
13	E3a_E4a	KnownJunction	1	4.61	3.10	0.00	0.00	1.15	8.63	11.51
14	E3a_E5a	KnownJunction	0	89.39	77.50	33.76	46.00	13.44	40.98	88.32
15	E3a_E6a	NovelJunction	1	8.06	20.89	2.31	3.71	4.29	3.83	0.63
16	E4a_E5a	KnownJunction	0	2.72	9.54	0.83	4.98	0.00	1.55	3.27
17	ER4a	ExonRegion	0	5.01	8.82	0.68	3.74	0.57	7.22	10.59
18	I4	Intron	1	12.36	21.04	3.84	18.16	3.55	64.97	4.44
19	I4_AR1	ActiveIntronRegion	1	15.59	28.55	4.54	22.78	3.88	102.46	4.86
20	I4_SR2	SilentIntronRegion	1	21.83	36.63	5.67	33.22	4.64	112.49	7.30
21	I4_AR2	ActiveIntronRegion	1	24.01	37.23	7.25	31.56	4.98	120.51	7.15
22	I4_SR3	SilentIntronRegion	1	11.44	33.09	4.30	27.95	5.12	84.36	7.56
23	E5_Aa	NovelBoundary	1	12.62	33.86	2.20	38.42	2.93	121.46	11.82
24	ER5a	ExonRegion	0	73.87	100.94	26.32	46.40	24.93	79.97	70.48
25	E5_Da	NovelBoundary	1	10.46	52.25	3.42	51.04	0.00	140.16	6.52
26	E5a_E6a	KnownJunction	0	80.48	68.33	37.20	30.29	23.97	28.70	93.50
27	I5	Intron	0	13.30	18.87	4.17	11.86	1.48	33.83	4.77
28	I5_SR1	SilentIntronRegion	0	13.31	18.88	4.17	11.87	1.48	33.84	4.77
29	E6_Aa	NovelBoundary	0	8.56	25.01	1.55	16.15	2.19	39.90	6.97
30	ER6a	ExonRegion	0	79.54	71.99	28.70	38.70	46.63	42.16	81.08
31	E6_Da	NovelBoundary	0	7.44	26.69	3.15	23.08	0.00	44.84	7.70
32	E6a_E7a	KnownJunction	1	64.39	58.72	18.42	19.10	40.85	5.82	56.68
33	I6	Intron	1	17.24	20.94	4.64	13.50	0.70	40.95	4.19
34	I6_SR1	SilentIntronRegion	0	17.27	20.98	4.65	13.52	0.70	41.04	4.20
35	E7_Aa	NovelBoundary	1	32.26	39.22	10.06	30.50	1.15	52.58	4.79
36	ER7a	ExonRegion	0	63.43	91.23	20.03	40.44	28.32	45.07	64.55
37	E7_Da	NovelBoundary	0	19.89	42.14	4.57	27.66	0.00	65.15	5.83
38	E7a_E8a	KnownJunction	1	55.06	67.41	23.21	30.45	14.41	15.09	59.56
39	I7	Intron	1	16.51	15.56	4.39	11.10	0.32	33.49	2.73
40	I7_SR1	SilentIntronRegion	1	19.85	18.71	5.01	13.75	0.39	40.92	3.22
41	E8_Aa	NovelBoundary	0	18.58	54.67	7.39	34.30	6.57	62.87	8.48
42	ER8a	ExonRegion	0	100.81	96.37	33.55	40.57	56.40	60.92	84.94
43	E8_Da	NovelBoundary	0	38.24	55.98	10.78	33.05	1.18	56.41	18.00
44	E8a_E9a	KnownJunction	1	94.70	58.93	40.11	15.44	33.93	11.15	91.72
45	I8	Intron	1	35.27	30.84	8.03	17.17	0.64	39.35	6.42
46	I8_AR1	ActiveIntronRegion	0	46.79	42.36	12.65	21.34	0.91	57.52	7.93
47	I8_SR1	SilentIntronRegion	0	27.91	23.44	5.04	14.52	0.47	27.64	5.46
48	E9_Aa	NovelBoundary	0	25.39	46.21	6.74	22.73	0.00	52.34	10.58
49	ER9a	ExonRegion	0	72.64	64.08	29.69	35.09	29.70	51.69	53.09
50	IG23	Intergenic	0	81.39	67.19	30.55	35.74	37.74	49.14	43.90
51	IG23_AR2	ActiveIntergenicRegion	0	106.11	83.56	41.16	43.19	56.07	58.89	63.47
52	IG23_SR2	SilentIntergenicRegion	0	26.38	38.30	8.99	24.13	0.42	29.09	5.42
53	IG23_AR1	ActiveIntergenicRegion	0	35.32	45.88	10.89	23.50	0.83	38.47	4.28
54	IG23_SR1	SilentIntergenicRegion	0	34.92	21.27	7.97	14.52	0.64	24.13	2.70