Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ATL3	Gene	0	100.27	117.02	189.09	100.94	71.13	65.94	202.15
2	332645	Transcript	0	0.49	0.00	1.36	0.75	0.69	0.00	0.63
3	398868	Transcript	0	45.02	49.81	80.92	46.37	26.24	29.40	83.88
4	ER1a	ExonRegion	0	0.73	0.00	2.51	2.26	2.07	0.00	1.90
5	E1a_E2b	KnownJunction	0	0.73	0.00	1.57	0.00	0.00	0.00	0.00
6	ER2a	ExonRegion	0	4.46	16.86	8.12	14.49	4.41	2.60	8.36
7	E2_Ab	KnownBoundary	0	14.70	34.39	23.57	27.31	7.95	9.67	23.45
8	ER2b	ExonRegion	0	31.39	50.75	40.73	48.37	22.66	27.06	61.15
9	E2a_E3a	KnownJunction	0	19.44	58.01	43.96	59.63	24.85	37.84	77.45
10	E3a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER3a	ExonRegion	0	22.53	74.49	51.88	61.89	29.12	44.02	76.38
12	ER3b	ExonRegion	0	62.33	105.63	99.95	92.14	31.13	61.38	125.63
13	E3_Ab	KnownBoundary	0	96.87	113.49	121.73	108.36	21.72	65.79	170.21
14	ER3c	ExonRegion	0	72.44	113.97	118.37	106.99	48.14	65.43	170.93
15	E3b_E4a	KnownJunction	0	72.97	125.42	161.45	106.74	65.03	76.41	172.59
16	ER4a	ExonRegion	0	77.93	128.14	178.82	107.20	54.16	83.14	163.64
17	E4a_E5a	KnownJunction	0	81.55	123.61	201.82	122.02	75.41	77.21	193.92
18	ER5a	ExonRegion	0	92.19	117.48	213.35	104.58	68.61	66.15	187.72
19	E5a_E6a	KnownJunction	0	104.56	124.66	190.97	94.01	73.03	60.43	167.56
20	ER6a	ExonRegion	0	130.86	119.99	238.81	99.00	80.60	68.54	202.34
21	E6a_E7a	KnownJunction	0	121.79	92.24	221.71	95.33	102.29	65.12	185.29
22	E6a_E8a	NovelJunction	0	10.61	12.08	14.69	13.98	3.34	9.35	4.87
23	ER7a	ExonRegion	0	159.35	139.05	291.30	123.78	95.68	70.91	232.70
24	E7a_E8a	KnownJunction	0	176.45	174.23	298.11	126.68	102.72	67.27	215.40
25	ER8a	ExonRegion	0	246.30	209.18	354.50	153.89	121.26	99.00	288.60
26	E8a_E9a	KnownJunction	0	243.51	183.82	371.50	152.63	127.14	110.44	327.20
27	ER9a	ExonRegion	0	206.37	194.72	345.34	149.48	121.62	94.86	322.06
28	E9a_E10a	KnownJunction	0	199.90	179.25	312.66	153.80	118.08	113.74	314.04
29	ER10a	ExonRegion	0	141.99	152.12	287.04	140.98	100.90	103.25	299.03
30	E10a_E11a	KnownJunction	0	124.02	108.74	249.54	118.82	92.05	73.86	235.22
31	E11_Aa	NovelBoundary	0	66.16	54.01	134.39	63.56	47.60	30.98	117.45
32	ER11a	ExonRegion	0	106.27	126.28	251.96	142.15	76.91	71.86	242.92
33	E11a_E12a	KnownJunction	0	80.15	146.36	213.96	150.87	74.69	72.68	229.76
34	ER12a	ExonRegion	0	94.39	134.22	221.99	119.78	71.92	68.64	220.15
35	E12a_E13a	KnownJunction	0	124.16	124.63	238.89	112.27	114.71	61.16	203.96
36	ER13a	ExonRegion	0	144.69	185.26	259.91	153.84	123.98	99.38	314.91
37	E13a_E14a	KnownJunction	0	89.04	122.37	157.01	104.65	87.76	74.80	249.40
38	E14_Aa	NovelBoundary	1	43.76	4.49	77.14	1.63	11.32	1.66	5.80
39	ER14a	ExonRegion	0	82.33	103.86	191.54	93.34	64.55	68.56	253.15
40	E14_Da	KnownBoundary	0	67.69	40.54	157.86	58.27	37.81	33.39	158.25
41	ER14b	ExonRegion	0	68.26	26.95	134.70	32.48	43.20	24.21	117.65
42	IG48	Intergenic	0	73.64	23.74	156.73	35.43	42.17	22.91	140.06
43	IG48_AR4	ActiveIntergenicRegion	0	71.04	11.45	106.13	23.44	34.85	23.99	62.42
44	IG48_SR1	SilentIntergenicRegion	0	26.04	4.40	41.83	5.68	18.76	5.60	35.92
45	IG48_AR2	ActiveIntergenicRegion	0	58.74	12.76	81.90	21.35	32.31	18.19	65.32
46	IG48_AR1	ActiveIntergenicRegion	0	76.51	25.86	168.84	38.12	44.10	23.79	153.25