Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	MICAL2	Gene	0	52.48	14.79	457.20	482.92	2.91	83.72	252.51
2	379612	Transcript	0	33.42	6.07	186.76	279.38	0.59	36.93	205.10
3	342902	Transcript	1	72.63	5.96	578.61	456.76	3.16	76.49	269.17
4	256194	Transcript	0	2.73	0.89	24.38	56.75	0.74	12.49	12.21
5	IG3_AR2	ActiveIntergenicRegion	0	0.00	0.00	4.20	11.52	0.32	1.75	0.72
6	IG3_SR3	SilentIntergenicRegion	0	0.00	0.00	6.00	10.66	0.88	0.99	0.79
7	IG3_AR3	ActiveIntergenicRegion	0	0.19	1.57	25.04	58.10	0.00	0.41	4.92
8	IG3_SR5	SilentIntergenicRegion	0	0.01	0.13	22.04	29.61	0.00	1.42	3.05
9	IG3_AR4	ActiveIntergenicRegion	0	0.88	0.63	14.67	11.98	0.00	0.22	2.28
10	IG3_SR6	SilentIntergenicRegion	0	0.27	0.46	8.08	13.57	0.03	0.75	2.65
11	IG3_AR5	ActiveIntergenicRegion	0	0.28	0.00	2.87	19.11	0.00	1.61	2.32
12	IG3_SR7	SilentIntergenicRegion	0	0.34	0.14	2.34	8.67	0.04	0.18	1.34
13	IG3_AR6	ActiveIntergenicRegion	0	0.26	0.00	3.78	11.07	0.31	0.52	1.22
14	IG3_SR8	SilentIntergenicRegion	0	0.00	0.00	2.71	8.73	0.00	1.23	2.02
15	IG3_AR8	ActiveIntergenicRegion	0	0.00	0.00	3.36	8.57	0.00	1.23	2.02
16	ER1a	ExonRegion	0	7.03	2.55	32.43	82.27	0.00	18.26	20.99
17	E1a_E2a	KnownJunction	0	3.45	2.89	28.08	89.86	0.00	12.27	16.17
18	E1a_E3a	NovelJunction	0	0.00	0.00	4.68	59.93	0.00	13.27	3.30
19	ER2a	ExonRegion	1	12.13	8.71	108.71	128.30	0.00	15.89	71.92
20	E2a_E3a	KnownJunction	0	18.73	7.25	171.98	198.98	0.00	51.64	134.54
21	ER3a	ExonRegion	0	51.74	27.12	497.26	625.26	1.78	125.61	261.43
22	E3a_E4a	KnownJunction	0	80.13	31.45	651.69	609.58	3.18	147.05	388.50
23	ER4a	ExonRegion	0	70.58	26.79	613.60	672.18	1.94	140.45	319.36
24	E4a_E5a	KnownJunction	0	111.91	27.90	859.13	675.08	1.06	142.15	373.96
25	ER5a	ExonRegion	0	128.91	34.00	1040.51	756.00	2.50	146.52	379.69
26	E5a_E6a	KnownJunction	1	147.22	16.76	1179.55	629.38	2.21	125.80	328.76
27	E5a_E7a	NovelJunction	0	9.18	2.68	47.88	86.80	0.00	22.32	15.01
28	ER6a	ExonRegion	0	110.69	19.33	999.56	545.44	2.14	98.78	339.98
29	E6a_E7a	KnownJunction	0	111.87	12.69	890.29	415.23	2.07	73.22	283.05
30	ER7a	ExonRegion	0	93.29	18.55	927.45	622.87	3.76	94.39	370.84
31	E7a_E8a	KnownJunction	0	104.35	25.80	1052.34	786.18	3.07	155.36	515.80
32	ER8a	ExonRegion	0	86.12	25.61	880.54	701.71	3.87	119.55	453.02
33	E8a_E9a	KnownJunction	0	49.65	24.88	656.62	608.60	7.63	110.31	364.20
34	E8a_E10a	NovelJunction	1	0.75	1.63	17.09	21.37	1.01	12.65	13.61
35	ER9a	ExonRegion	0	49.96	21.64	527.87	620.33	4.33	102.89	356.10
36	E9a_E10a	KnownJunction	0	49.82	13.29	459.39	546.97	3.34	91.31	279.84
37	ER10a	ExonRegion	0	36.90	20.10	376.83	550.30	2.96	87.30	284.92
38	E10a_E11a	KnownJunction	0	31.46	26.51	386.94	555.07	3.25	86.64	312.40
39	E10a_E12a	NovelJunction	0	1.74	0.00	17.73	71.01	0.00	5.90	11.71
40	ER11a	ExonRegion	0	46.29	20.22	524.08	650.53	2.72	91.94	358.61
41	E11a_E12a	KnownJunction	0	54.54	17.44	539.63	619.68	2.10	74.24	344.60
42	ER12a	ExonRegion	0	54.05	18.97	504.96	688.01	2.26	82.59	354.84
43	E12a_E13a	KnownJunction	0	50.57	20.47	457.91	728.75	1.18	90.69	315.96
44	ER13a	ExonRegion	0	50.08	17.76	493.78	694.55	3.02	85.41	366.88
45	E13a_E14a	KnownJunction	0	41.62	12.64	446.37	607.46	3.00	70.80	311.48
46	ER14a	ExonRegion	0	49.54	21.47	529.14	649.26	2.90	104.61	329.20
47	E14a_E15a	KnownJunction	0	45.51	18.47	612.84	672.37	2.60	121.94	287.10
48	ER15a	ExonRegion	0	63.72	18.48	724.48	731.52	4.08	114.91	373.57
49	E15a_E16a	KnownJunction	0	63.17	11.06	615.90	711.28	4.84	116.66	386.20
50	E15a_E17a	NovelJunction	1	5.12	0.00	27.89	74.74	0.00	25.22	3.68
51	ER16a	ExonRegion	1	60.78	9.84	593.54	684.65	3.16	115.81	355.66
52	E16a_E17a	KnownJunction	0	50.99	9.30	549.10	583.65	2.33	86.54	315.03
53	ER17a	ExonRegion	0	84.49	19.22	718.63	768.29	4.66	122.50	424.00
54	E17a_E18a	KnownJunction	0	0.85	1.44	23.70	54.83	0.00	3.89	1.52
55	E17a_E21a	NovelJunction	1	2.89	0.00	17.96	70.27	0.00	20.21	0.00
56	E17a_E22a	KnownJunction	0	29.39	6.25	175.23	242.06	1.18	30.77	209.31
57	E17a_E24a	KnownJunction	1	72.63	5.96	578.61	456.76	3.16	76.49	269.17
58	ER18a	ExonRegion	0	3.97	0.99	27.83	48.17	0.00	2.62	7.57
59	E18a_E19a	KnownJunction	1	0.00	0.00	5.48	17.69	0.00	1.50	0.00
60	ER19a	ExonRegion	0	1.51	0.00	10.72	35.99	1.13	2.16	1.64
61	E19a_E20a	KnownJunction	0	0.00	0.00	5.02	27.47	0.00	3.06	0.00
62	ER20a	ExonRegion	0	1.35	0.00	10.12	41.91	0.40	3.57	2.04
63	E20a_E21a	KnownJunction	1	0.90	0.00	2.17	13.82	0.00	2.79	0.00
64	ER21a	ExonRegion	0	3.23	0.00	16.97	87.17	0.66	11.08	4.79
65	E21a_E22a	KnownJunction	0	0.00	0.00	10.35	66.97	0.00	11.04	0.00
66	E21a_E24a	NovelJunction	0	0.67	0.00	7.04	31.97	0.00	7.77	0.00
67	ER22a	ExonRegion	0	33.82	7.31	200.14	337.57	0.71	42.85	212.51
68	E22a_E23a	KnownJunction	1	0.00	0.00	4.41	15.47	1.18	4.69	0.69
69	E22a_E24a	KnownJunction	0	37.45	5.88	198.28	316.69	0.00	43.09	200.88
70	ER23a	ExonRegion	0	0.82	1.73	13.11	29.67	0.56	6.08	6.52
71	E23a_E24a	KnownJunction	0	0.72	0.00	11.21	28.15	0.00	6.83	0.00
72	E24_Aa	NovelBoundary	0	15.61	1.21	86.15	20.51	0.00	5.07	5.63
73	ER24a	ExonRegion	0	136.28	16.22	836.22	798.58	8.15	121.62	489.90
74	E24a_E25a	KnownJunction	0	161.76	16.76	821.70	765.73	8.32	133.30	449.20
75	ER25a	ExonRegion	0	142.58	13.10	878.74	770.51	4.24	112.47	430.91
76	E25a_E26a	KnownJunction	0	133.10	13.29	930.16	791.90	4.77	111.35	497.76
77	ER26a	ExonRegion	1	73.32	7.17	519.40	545.38	4.14	96.10	275.28
78	E26_Da	KnownBoundary	1	65.29	2.68	494.08	269.23	5.26	63.57	158.56
79	E26a_E27a	KnownJunction	0	0.00	0.00	3.23	33.54	0.00	6.97	0.00
80	ER26b	ExonRegion	0	39.38	7.06	305.57	312.00	3.96	61.76	163.98
81	E26_Db	NovelBoundary	0	35.05	17.79	314.62	408.21	4.98	105.27	193.72
82	I26	Intron	0	93.46	14.88	817.98	513.29	9.29	115.23	364.50
83	I26_AR1	ActiveIntronRegion	0	93.54	14.90	818.67	513.71	9.30	115.33	364.80
84	E27_Aa	NovelBoundary	0	43.36	10.59	477.80	376.92	6.43	121.13	217.32
85	ER27a	ExonRegion	0	2.85	0.17	26.99	42.33	2.14	7.84	2.28
86	E27_Da	NovelBoundary	1	173.93	10.64	1613.59	927.38	17.04	264.81	653.31
87	E27a_E28a	KnownJunction	0	0.00	0.00	1.84	37.68	0.00	9.14	0.00
88	I27	Intron	1	92.72	18.22	894.84	659.79	11.57	229.07	471.73
89	I27_AR1	ActiveIntronRegion	1	92.89	18.26	896.44	660.98	11.59	229.48	472.59
90	E28_Aa	NovelBoundary	1	71.15	17.10	528.27	809.37	7.10	307.85	440.46
91	ER28a	ExonRegion	1	27.53	9.89	216.98	327.21	5.72	116.62	168.37
92	IG4	Intergenic	0	2.20	0.56	10.50	13.02	0.04	1.12	9.60
93	IG4_SR1	SilentIntergenicRegion	0	2.49	0.65	11.04	11.87	0.02	1.18	10.43
94	IG4_AR2	ActiveIntergenicRegion	0	4.29	0.14	45.25	110.99	0.47	3.92	60.22
95	IG4_SR2	SilentIntergenicRegion	0	2.43	0.49	10.91	15.95	0.03	0.86	7.76
96	IG4_AR3	ActiveIntergenicRegion	0	3.78	2.76	57.08	116.33	0.74	6.40	70.17