Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	AP2A2	Gene	0	91.32	98.43	92.80	69.86	124.48	72.15	226.35
2	329626	Transcript	0	0	0	0	0	0	0	0
3	332231	Transcript	0	170.28	140.12	154.88	107.27	196.15	109.42	331.71
4	ER1a	ExonRegion	0	6.24	21.18	9.09	10.72	4.88	13.95	17.03
5	E1a_E2a	KnownJunction	0	40.96	85.57	57.32	35.35	28.70	58.58	122.76
6	ER2a	ExonRegion	1	51.96	101.91	115.91	42.63	110.49	84.54	196.88
7	E2a_E3a	KnownJunction	1	64.57	121.98	158.39	45.59	151.30	110.47	227.27
8	E2a_E5a	NovelJunction	0	1.65	8.25	2.99	1.68	1.18	5.87	1.35
9	ER3a	ExonRegion	0	62.60	176.69	126.45	68.97	89.82	111.01	281.02
10	E3a_E4a	KnownJunction	0	66.84	173.68	135.35	71.36	110.49	116.04	235.64
11	ER4a	ExonRegion	0	64.35	151.64	107.24	79.38	109.31	104.48	293.45
12	E4a_E5a	KnownJunction	0	71.77	143.21	93.85	77.78	95.28	108.30	270.89
13	ER5a	ExonRegion	0	88.22	157.48	126.62	92.45	177.57	119.14	375.23
14	E5a_E6a	KnownJunction	0	116.80	181.19	162.34	114.73	164.80	174.55	504.18
15	ER6a	ExonRegion	0	107.58	182.30	153.91	107.56	141.95	143.83	424.05
16	E6a_E7a	KnownJunction	0	112.69	186.87	137.25	120.56	150.24	133.68	388.48
17	ER7a	ExonRegion	0	135.56	178.76	180.98	121.18	224.37	130.87	479.86
18	E7a_E8a	KnownJunction	0	108.32	123.63	119.22	89.43	89.17	74.45	301.46
19	ER8a	ExonRegion	0	159.73	164.35	154.21	125.12	180.22	117.98	451.24
20	E8a_E9a	KnownJunction	0	176.03	178.30	148.26	158.37	159.80	144.21	532.70
21	E9_Aa	NovelBoundary	1	61.55	1.34	47.38	0.00	1.13	0.00	2.78
22	ER9a	ExonRegion	0	136.55	155.01	123.30	112.98	200.15	90.87	451.19
23	E9a_E10a	KnownJunction	0	115.68	133.62	96.61	103.14	181.79	95.30	367.14
24	ER10a	ExonRegion	0	106.68	138.29	89.08	97.33	186.72	88.20	401.16
25	ER10b	ExonRegion	0	103.41	151.50	100.66	103.10	208.80	87.32	444.38
26	E10b_E11a	KnownJunction	0	131.15	166.72	149.09	109.34	205.56	109.56	458.30
27	ER11a	ExonRegion	0	156.35	183.88	166.67	118.68	238.38	107.57	499.40
28	E11a_E12a	KnownJunction	0	179.07	169.90	165.37	109.69	226.15	126.71	452.30
29	E11a_E13a	NovelJunction	0	1.62	3.15	3.03	5.50	0.00	8.60	6.72
30	ER12a	ExonRegion	0	143.97	148.34	142.91	102.53	202.84	91.45	383.59
31	E12a_E13a	KnownJunction	0	164.36	137.24	163.56	92.68	212.92	71.96	435.52
32	E13_Aa	NovelBoundary	1	72.10	7.09	71.41	4.82	0.00	1.05	0.00
33	ER13a	ExonRegion	0	115.26	142.77	108.94	96.47	166.55	87.79	341.77
34	E13a_E14a	KnownJunction	0	92.53	157.87	90.62	109.15	136.10	94.47	311.45
35	ER14a	ExonRegion	0	67.08	115.41	56.90	76.97	87.58	68.71	172.79
36	E14a_E15a	KnownJunction	0	43.51	69.09	37.26	53.32	79.16	23.72	127.35
37	E14a_E16a	NovelJunction	1	30.28	26.11	20.26	9.05	12.15	38.46	7.88
38	ER15a	ExonRegion	0	172.07	45.97	113.98	38.97	139.29	32.49	157.37
39	E15a_E16a	KnownJunction	0	305.16	105.72	228.45	86.58	160.75	114.73	268.43
40	ER16a	ExonRegion	0	330.87	161.49	273.39	139.57	170.46	175.33	304.23
41	E16a_E17a	KnownJunction	0	578.69	204.21	419.57	175.44	217.73	221.77	493.26
42	ER17a	ExonRegion	0	406.11	143.95	322.63	137.65	348.75	163.96	404.94
43	E17_Da	NovelBoundary	1	26.47	8.14	30.59	11.24	16.18	7.72	8.10
44	E17a_E18a	KnownJunction	0	160.92	76.53	159.83	95.50	217.64	78.07	198.76
45	I17	Intron	0	17.25	9.59	16.73	12.75	11.39	14.82	8.55
46	I17_AR1	ActiveIntronRegion	0	17.27	9.60	16.75	12.77	11.40	14.84	8.57
47	ER18a	ExonRegion	0	123.08	104.30	113.79	87.26	163.68	90.51	240.56
48	E18a_E19a	KnownJunction	0	83.53	131.33	101.18	83.96	222.51	104.92	350.70
49	E19_Aa	NovelBoundary	0	6.43	9.67	3.64	8.78	5.67	22.16	5.62
50	ER19a	ExonRegion	0	144.28	140.67	169.40	106.03	220.99	125.30	370.92
51	E19a_E20a	KnownJunction	0	181.59	212.06	154.29	166.58	268.45	175.75	395.42
52	ER20a	ExonRegion	0	143.73	206.13	161.12	158.58	263.71	158.87	386.57
53	E20a_E21a	KnownJunction	0	131.13	191.78	181.63	136.19	276.27	132.34	358.53
54	ER21a	ExonRegion	0	214.43	219.29	233.60	165.41	334.56	166.77	494.25
55	E21a_E22a	KnownJunction	0	152.86	163.93	136.29	151.28	184.84	148.23	397.90
56	ER22a	ExonRegion	0	94.55	76.77	66.62	72.29	125.62	76.89	161.72
57	E22_Ab	KnownBoundary	0	28.94	6.17	19.74	13.55	63.93	6.73	13.24
58	ER22b	ExonRegion	0	10.05	9.38	13.13	12.95	28.89	6.72	16.92
59	E22_Da	KnownBoundary	0	7.68	18.99	9.02	8.97	27.13	7.75	13.66
60	ER22c	ExonRegion	0	7.53	16.17	9.21	15.88	20.69	9.77	14.07